RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 FBXO10Q9UK96 956 aa9.09□□□□□ -0.95
SMG6-216ENST00000575176 FBXO4Q9UKT5 387 aa9.09□□□□□ -0.95
SMG6-216ENST00000575176 CLEC4EQ9ULY5 219 aa9.09□□□□□ -0.95
SMG6-216ENST00000575176 SYCE3A1L190 88 aa9.08□□□□□ -0.96
SMG6-216ENST00000575176 PRR23AA6NEV1 266 aa9.08□□□□□ -0.96
SMG6-216ENST00000575176 TEX33O43247 280 aa9.08□□□□□ -0.96
SMG6-216ENST00000575176 THAP12O43422 761 aa9.08□□□□□ -0.96
SMG6-216ENST00000575176 RNF40O75150 1001 aa9.08□□□□□ -0.96
SMG6-216ENST00000575176 LTFP02788 710 aa9.08□□□□□ -0.96
SMG6-216ENST00000575176 CISD3P0C7P0 127 aa9.08□□□□□ -0.96
SMG6-216ENST00000575176 ADH5P11766 374 aa9.08□□□□□ -0.96
SMG6-216ENST00000575176 KRT5P13647 590 aa9.08□□□□□ -0.96
SMG6-216ENST00000575176 LCP1P13796 627 aa9.08□□□□□ -0.96
SMG6-216ENST00000575176 CYP11B1P15538 503 aa9.08□□□□□ -0.96
SMG6-216ENST00000575176 ATP5C1P36542 298 aaKnown RBP9.08□□□□□ -0.96
SMG6-216ENST00000575176 PBX1P40424 430 aa9.08□□□□□ -0.96
SMG6-216ENST00000575176 NOMO3P69849 1222 aa9.08□□□□□ -0.96
SMG6-216ENST00000575176 FMO1Q01740 532 aa9.08□□□□□ -0.96
SMG6-216ENST00000575176 EFEMP1Q12805 493 aa9.08□□□□□ -0.96
SMG6-216ENST00000575176 SYCP1Q15431 976 aa9.08□□□□□ -0.96
SMG6-216ENST00000575176 FAM133BQ5BKY9 247 aaKnown RBP9.08□□□□□ -0.96
SMG6-216ENST00000575176 C10orf120Q5SQS8 335 aa9.08□□□□□ -0.96
SMG6-216ENST00000575176 SYPL2Q5VXT5 272 aa9.08□□□□□ -0.96
SMG6-216ENST00000575176 NADSYN1Q6IA69 706 aa9.08□□□□□ -0.96
SMG6-216ENST00000575176 SASS6Q6UVJ0 657 aa9.08□□□□□ -0.96
SMG6-216ENST00000575176 BEND5Q7L4P6 421 aa9.08□□□□□ -0.96
SMG6-216ENST00000575176 TAC4Q86UU9 113 aa9.08□□□□□ -0.96
SMG6-216ENST00000575176 PASD1Q8IV76 773 aa9.08□□□□□ -0.96
SMG6-216ENST00000575176 SPEM1Q8N4L4 309 aa9.08□□□□□ -0.96
SMG6-216ENST00000575176 SUMF1Q8NBK3 374 aa9.08□□□□□ -0.96
SMG6-216ENST00000575176 DQX1Q8TE96 717 aaKnown RBP9.08□□□□□ -0.96
SMG6-216ENST00000575176 BAP1Q92560 729 aa9.08□□□□□ -0.96
SMG6-216ENST00000575176 CD101Q93033 1021 aa9.08□□□□□ -0.96
SMG6-216ENST00000575176 FAM81BQ96LP2 452 aa9.08□□□□□ -0.96
SMG6-216ENST00000575176 SLC2A13Q96QE2 648 aa9.08□□□□□ -0.96
SMG6-216ENST00000575176 P2RY13Q9BPV8 354 aa9.08□□□□□ -0.96
SMG6-216ENST00000575176 LHX5Q9H2C1 402 aa9.08□□□□□ -0.96
SMG6-216ENST00000575176 SPHK2Q9NRA0 654 aa9.08□□□□□ -0.96
SMG6-216ENST00000575176 SFMBT1Q9UHJ3 866 aa9.08□□□□□ -0.96
SMG6-216ENST00000575176 RASAL2Q9UJF2 1139 aa9.08□□□□□ -0.96
SMG6-216ENST00000575176 AGO1Q9UL18 857 aaKnown RBP9.08□□□□□ -0.96
SMG6-216ENST00000575176 MRPS17Q9Y2R5 130 aaKnown RBP9.08□□□□□ -0.96
SMG6-216ENST00000575176 SPEGQ15772 3267 aa9.08□□□□□ -0.96
SMG6-216ENST00000575176 PCDH15Q96QU1 1955 aa9.07□□□□□ -0.96
SMG6-216ENST00000575176 A0A1B0GTH6 734 aa9.07□□□□□ -0.96
SMG6-216ENST00000575176 IRAK2O43187 625 aa9.07□□□□□ -0.96
SMG6-216ENST00000575176 ADAM23O75077 832 aa9.07□□□□□ -0.96
SMG6-216ENST00000575176 TULP3O75386 442 aa9.07□□□□□ -0.96
SMG6-216ENST00000575176 TFE3P19532 575 aaPredicted RBP9.07□□□□□ -0.96
SMG6-216ENST00000575176 HOXD9P28356 352 aaPredicted RBP9.07□□□□□ -0.96
SMG6-216ENST00000575176 CORO1AP31146 461 aaKnown RBP9.07□□□□□ -0.96
SMG6-216ENST00000575176 HOXA6P31267 233 aa9.07□□□□□ -0.96
SMG6-216ENST00000575176 SLC6A4P31645 630 aa9.07□□□□□ -0.96
SMG6-216ENST00000575176 GABRB2P47870 512 aa9.07□□□□□ -0.96
SMG6-216ENST00000575176 PTP4A2Q12974 167 aa9.07□□□□□ -0.96
SMG6-216ENST00000575176 LRRC32Q14392 662 aa9.07□□□□□ -0.96
SMG6-216ENST00000575176 TPD52L1Q16890 204 aaPredicted RBP9.07□□□□□ -0.96
SMG6-216ENST00000575176 DGKKQ5KSL6 1271 aa9.07□□□□□ -0.96
SMG6-216ENST00000575176 CC2D1AQ6P1N0 951 aaPredicted RBP9.07□□□□□ -0.96
SMG6-216ENST00000575176 TOGARAM2Q6ZUX3 1019 aa9.07□□□□□ -0.96
SMG6-216ENST00000575176 FAM183BPQ6ZVS7 135 aa9.07□□□□□ -0.96
SMG6-216ENST00000575176 FMNL3Q8IVF7 1028 aa9.07□□□□□ -0.96
SMG6-216ENST00000575176 SCUBE3Q8IX30 993 aa9.07□□□□□ -0.96
SMG6-216ENST00000575176 SIX6OS1Q8N1H7 587 aa9.07□□□□□ -0.96
SMG6-216ENST00000575176 ARHGAP18Q8N392 663 aa9.07□□□□□ -0.96
SMG6-216ENST00000575176 SYNPOQ8N3V7 929 aa9.07□□□□□ -0.96
SMG6-216ENST00000575176 CPXM2Q8N436 756 aa9.07□□□□□ -0.96
SMG6-216ENST00000575176 TERB1Q8NA31 727 aa9.07□□□□□ -0.96
SMG6-216ENST00000575176 WFDC5Q8TCV5 224 aa9.07□□□□□ -0.96
SMG6-216ENST00000575176 USP33Q8TEY7 942 aa9.07□□□□□ -0.96
SMG6-216ENST00000575176 PLD4Q96BZ4 506 aa9.07□□□□□ -0.96
SMG6-216ENST00000575176 LMLNQ96KR4 655 aa9.07□□□□□ -0.96
SMG6-216ENST00000575176 NAP1L5Q96NT1 182 aaPredicted RBP9.07□□□□□ -0.96
SMG6-216ENST00000575176 STK33Q9BYT3 514 aa9.07□□□□□ -0.96
SMG6-216ENST00000575176 LRRC4Q9HBW1 653 aa9.07□□□□□ -0.96
SMG6-216ENST00000575176 CBX8Q9HC52 389 aa9.07□□□□□ -0.96
SMG6-216ENST00000575176 RTN4Q9NQC3 1192 aaKnown RBP9.07□□□□□ -0.96
SMG6-216ENST00000575176 ANLNQ9NQW6 1124 aa9.07□□□□□ -0.96
SMG6-216ENST00000575176 FAM207AQ9NSI2 230 aaPredicted RBP9.07□□□□□ -0.96
SMG6-216ENST00000575176 SPATA6Q9NWH7 488 aaPredicted RBP9.07□□□□□ -0.96
SMG6-216ENST00000575176 MARCH2Q9P0N8 246 aa9.07□□□□□ -0.96
SMG6-216ENST00000575176 TBC1D14Q9P2M4 693 aa9.07□□□□□ -0.96
SMG6-216ENST00000575176 XPO7Q9UIA9 1087 aaKnown RBP9.07□□□□□ -0.96
SMG6-216ENST00000575176 NAALADL1Q9UQQ1 740 aa9.07□□□□□ -0.96
SMG6-216ENST00000575176 R4GN57 208 aa9.07□□□□□ -0.96
SMG6-216ENST00000575176 WDFY3Q8IZQ1 3526 aa9.07□□□□□ -0.96
SMG6-216ENST00000575176 RALGAPA1Q6GYQ0 2036 aa9.06□□□□□ -0.96
SMG6-216ENST00000575176 TCRBV5S1A1TA0A578 114 aa9.06□□□□□ -0.96
SMG6-216ENST00000575176 PRRT4C9JH25 899 aa9.06□□□□□ -0.96
SMG6-216ENST00000575176 SLC9A3R1O14745 358 aaPredicted RBP9.06□□□□□ -0.96
SMG6-216ENST00000575176 FBXO21O94952 628 aa9.06□□□□□ -0.96
SMG6-216ENST00000575176 ADH1CP00326 375 aa9.06□□□□□ -0.96
SMG6-216ENST00000575176 CYP1A1P04798 512 aaPredicted RBP9.06□□□□□ -0.96
SMG6-216ENST00000575176 MMEP08473 750 aa9.06□□□□□ -0.96
SMG6-216ENST00000575176 TRIM21P19474 475 aaKnown RBP9.06□□□□□ -0.96
SMG6-216ENST00000575176 DRD1P21728 446 aa9.06□□□□□ -0.96
SMG6-216ENST00000575176 MRE11P49959 708 aa9.06□□□□□ -0.96
SMG6-216ENST00000575176 POLR2FP61218 127 aaKnown RBP9.06□□□□□ -0.96
SMG6-216ENST00000575176 KDSRQ06136 332 aa9.06□□□□□ -0.96
SMG6-216ENST00000575176 RING1Q06587 406 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms