RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 CCDC33Q8N5R6 958 aa9.9□□□□□ -0.83
CCDC40-212ENST00000574799 DQX1Q8TE96 717 aaKnown RBP9.9□□□□□ -0.83
CCDC40-212ENST00000574799 POMGNT1Q8WZA1 660 aa9.9□□□□□ -0.83
CCDC40-212ENST00000574799 EPS15L1Q9UBC2 864 aa9.9□□□□□ -0.83
CCDC40-212ENST00000574799 GNEQ9Y223 722 aaKnown RBP9.9□□□□□ -0.83
CCDC40-212ENST00000574799 POMPQ9Y244 141 aa9.9□□□□□ -0.83
CCDC40-212ENST00000574799 E5RJQ4 531 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 VILLO15195 856 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 PSTPIP1O43586 416 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 DCXO43602 365 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 USP2O75604 605 aaPredicted RBP9.89□□□□□ -0.83
CCDC40-212ENST00000574799 SORBS2O94875 1100 aaKnown RBP9.89□□□□□ -0.83
CCDC40-212ENST00000574799 TFAP2AP05549 437 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 SERPINA6P08185 405 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 ADSSP30520 456 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 SMTNL2Q2TAL5 461 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 PPP6R3Q5H9R7 873 aaPredicted RBP9.89□□□□□ -0.83
CCDC40-212ENST00000574799 LMBRD2Q68DH5 695 aaPredicted RBP9.89□□□□□ -0.83
CCDC40-212ENST00000574799 POLNQ7Z5Q5 900 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 FBXL13Q8NEE6 735 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 EXD1Q8NHP7 514 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 CYLDQ9NQC7 956 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 CDH22Q9UJ99 828 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 E2F8A0AVK6 867 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 KBTBD13C9JR72 458 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 CRTAMO95727 393 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 FDX1P10109 184 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 GCAP28676 217 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 PCSK6P29122 969 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 STIP1P31948 543 aaKnown RBP9.89□□□□□ -0.83
CCDC40-212ENST00000574799 HALP42357 657 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 OXCT1P55809 520 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 RPL10AP62906 217 aaKnown RBP9.89□□□□□ -0.83
CCDC40-212ENST00000574799 GAD2Q05329 585 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 CLEC16AQ2KHT3 1053 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 FSCBQ5H9T9 825 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 TREML2Q5T2D2 321 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 WDR78Q5VTH9 848 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 TTC39BQ5VTQ0 682 aaPredicted RBP9.89□□□□□ -0.83
CCDC40-212ENST00000574799 PLEKHA7Q6IQ23 1121 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 SLC39A4Q6P5W5 647 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 FAM71AQ8IYT1 594 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 CPXCR1Q8N123 301 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 KCTD17Q8N5Z5 321 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 FAM71DQ8N9W8 422 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 BSNDQ8WZ55 320 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 USP13Q92995 863 aaPredicted RBP9.89□□□□□ -0.83
CCDC40-212ENST00000574799 SERAC1Q96JX3 654 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 GPRC5CQ9NQ84 441 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 SNCAIPQ9Y6H5 919 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 TMEM247A6NEH6 219 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 E9PBE3 544 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 NEMP1O14524 444 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 TP73O15350 636 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 SLC16A4O15374 487 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 FOXD2O60548 495 aaPredicted RBP9.89□□□□□ -0.83
CCDC40-212ENST00000574799 KLHL41O60662 606 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 LYPLA2O95372 231 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 ZNF24P17028 368 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 EIF2AK2P19525 551 aaKnown RBP9.89□□□□□ -0.83
CCDC40-212ENST00000574799 HMOX2P30519 316 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 HOXD12P35452 270 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 SLC5A3P53794 718 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 PEX3P56589 373 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 C6orf183Q5T699 404 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 TMEM270Q6UE05 265 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 FASTKD5Q7L8L6 764 aaKnown RBP9.89□□□□□ -0.83
CCDC40-212ENST00000574799 CXorf38Q8TB03 319 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 TAS1R2Q8TE23 839 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 SREK1Q8WXA9 508 aaKnown RBP9.89□□□□□ -0.83
CCDC40-212ENST00000574799 COX4I2Q96KJ9 171 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 KREMEN1Q96MU8 473 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 ARMC7Q9H6L4 198 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 KCNK13Q9HB14 408 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 TOPORSQ9NS56 1045 aaPredicted RBP9.89□□□□□ -0.83
CCDC40-212ENST00000574799 COQ6Q9Y2Z9 468 aa9.89□□□□□ -0.83
CCDC40-212ENST00000574799 MATN2O00339 956 aa9.88□□□□□ -0.83
CCDC40-212ENST00000574799 CST8O60676 142 aa9.88□□□□□ -0.83
CCDC40-212ENST00000574799 FAM155BO75949 473 aa9.88□□□□□ -0.83
CCDC40-212ENST00000574799 PORP16435 677 aaPredicted RBP9.88□□□□□ -0.83
CCDC40-212ENST00000574799 PAX3P23760 479 aa9.88□□□□□ -0.83
CCDC40-212ENST00000574799 SERPINB5P36952 375 aa9.88□□□□□ -0.83
CCDC40-212ENST00000574799 MAPK10P53779 464 aa9.88□□□□□ -0.83
CCDC40-212ENST00000574799 HMGCS2P54868 508 aa9.88□□□□□ -0.83
CCDC40-212ENST00000574799 MSLNQ13421 630 aaPredicted RBP9.88□□□□□ -0.83
CCDC40-212ENST00000574799 TRIM16LQ309B1 348 aa9.88□□□□□ -0.83
CCDC40-212ENST00000574799 FAM102BQ5T8I3 360 aa9.88□□□□□ -0.83
CCDC40-212ENST00000574799 PDPK2PQ6A1A2 396 aa9.88□□□□□ -0.83
CCDC40-212ENST00000574799 SCARA3Q6AZY7 606 aa9.88□□□□□ -0.83
CCDC40-212ENST00000574799 FBXL19Q6PCT2 694 aa9.88□□□□□ -0.83
CCDC40-212ENST00000574799 ADGRD1Q6QNK2 874 aa9.88□□□□□ -0.83
CCDC40-212ENST00000574799 TAS1R3Q7RTX0 852 aa9.88□□□□□ -0.83
CCDC40-212ENST00000574799 VSIG10LQ86VR7 867 aa9.88□□□□□ -0.83
CCDC40-212ENST00000574799 CBWD2Q8IUF1 395 aa9.88□□□□□ -0.83
CCDC40-212ENST00000574799 ACTL9Q8TC94 416 aa9.88□□□□□ -0.83
CCDC40-212ENST00000574799 DIS3LQ8TF46 1054 aaKnown RBP9.88□□□□□ -0.83
CCDC40-212ENST00000574799 VPS50Q96JG6 964 aa9.88□□□□□ -0.83
CCDC40-212ENST00000574799 WRNIP1Q96S55 665 aa9.88□□□□□ -0.83
CCDC40-212ENST00000574799 CORO1BQ9BR76 489 aa9.88□□□□□ -0.83
CCDC40-212ENST00000574799 TMEM79Q9BSE2 394 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms