RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 PRR5-ARHGAP8B1AHC4 643 aa18.26■□□□□ 0.51
SMG6-214ENST00000573827 NEDD8-MDP1E9PL57 170 aa18.26■□□□□ 0.51
SMG6-214ENST00000573827 BRD2P25440 801 aaKnown RBP18.26■□□□□ 0.51
SMG6-214ENST00000573827 RPL34P49207 117 aaKnown RBP18.26■□□□□ 0.51
SMG6-214ENST00000573827 ATXN1P54253 815 aaKnown RBP18.26■□□□□ 0.51
SMG6-214ENST00000573827 DAOAP59103 153 aa18.26■□□□□ 0.51
SMG6-214ENST00000573827 COG7P83436 770 aa18.26■□□□□ 0.51
SMG6-214ENST00000573827 ARHGAP8P85298 464 aa18.26■□□□□ 0.51
SMG6-214ENST00000573827 GOLGA8FQ08AF8 430 aa18.26■□□□□ 0.51
SMG6-214ENST00000573827 GOLGA8DPQ0D2H9 430 aa18.26■□□□□ 0.51
SMG6-214ENST00000573827 TRIP4Q15650 581 aaPredicted RBP18.26■□□□□ 0.51
SMG6-214ENST00000573827 BTBD8Q5XKL5 378 aa18.26■□□□□ 0.51
SMG6-214ENST00000573827 ANO7Q6IWH7 933 aa18.26■□□□□ 0.51
SMG6-214ENST00000573827 PRR23CQ6ZRP0 262 aa18.26■□□□□ 0.51
SMG6-214ENST00000573827 TPGS1Q6ZTW0 290 aa18.26■□□□□ 0.51
SMG6-214ENST00000573827 RBBP8NLQ8NC74 664 aaPredicted RBP18.26■□□□□ 0.51
SMG6-214ENST00000573827 DNAJC17Q9NVM6 304 aaKnown RBP18.26■□□□□ 0.51
SMG6-214ENST00000573827 HESX1Q9UBX0 185 aa18.26■□□□□ 0.51
SMG6-214ENST00000573827 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.26■□□□□ 0.51
SMG6-214ENST00000573827 A0A1W2PQF6 199 aa18.25■□□□□ 0.51
SMG6-214ENST00000573827 CCDC192P0DO97 292 aa18.25■□□□□ 0.51
SMG6-214ENST00000573827 BCKDHBP21953 392 aa18.25■□□□□ 0.51
SMG6-214ENST00000573827 CORO1AP31146 461 aaKnown RBP18.25■□□□□ 0.51
SMG6-214ENST00000573827 SLC8A3P57103 927 aa18.25■□□□□ 0.51
SMG6-214ENST00000573827 FOXK2Q01167 660 aa18.25■□□□□ 0.51
SMG6-214ENST00000573827 C10orf76Q5T2E6 689 aa18.25■□□□□ 0.51
SMG6-214ENST00000573827 BSPRYQ5W0U4 402 aa18.25■□□□□ 0.51
SMG6-214ENST00000573827 EGFLAMQ63HQ2 1017 aa18.25■□□□□ 0.51
SMG6-214ENST00000573827 GRAMD4Q6IC98 578 aa18.25■□□□□ 0.51
SMG6-214ENST00000573827 ACOX2Q99424 681 aa18.25■□□□□ 0.51
SMG6-214ENST00000573827 TPSD1Q9BZJ3 242 aa18.25■□□□□ 0.51
SMG6-214ENST00000573827 ARRDC1-AS1Q9H2J1 176 aa18.25■□□□□ 0.51
SMG6-214ENST00000573827 LRRC4Q9HBW1 653 aa18.25■□□□□ 0.51
SMG6-214ENST00000573827 CNGB3Q9NQW8 809 aa18.25■□□□□ 0.51
SMG6-214ENST00000573827 CLEC4EQ9ULY5 219 aa18.25■□□□□ 0.51
SMG6-214ENST00000573827 PLXND1Q9Y4D7 1925 aa18.24■□□□□ 0.51
SMG6-214ENST00000573827 GDF9O60383 454 aa18.24■□□□□ 0.51
SMG6-214ENST00000573827 HMBSP08397 361 aa18.24■□□□□ 0.51
SMG6-214ENST00000573827 RGS7P49802 495 aa18.24■□□□□ 0.51
SMG6-214ENST00000573827 CETN1Q12798 172 aa18.24■□□□□ 0.51
SMG6-214ENST00000573827 EOGTQ5NDL2 527 aa18.24■□□□□ 0.51
SMG6-214ENST00000573827 MSANTD2Q6P1R3 559 aa18.24■□□□□ 0.51
SMG6-214ENST00000573827 CLEC17AQ6ZS10 378 aa18.24■□□□□ 0.51
SMG6-214ENST00000573827 CPXM2Q8N436 756 aa18.24■□□□□ 0.51
SMG6-214ENST00000573827 ZNF513Q8N8E2 541 aaPredicted RBP18.24■□□□□ 0.51
SMG6-214ENST00000573827 DCLK3Q9C098 648 aa18.24■□□□□ 0.51
SMG6-214ENST00000573827 CLSTN2Q9H4D0 955 aa18.24■□□□□ 0.51
SMG6-214ENST00000573827 RXFP3Q9NSD7 469 aa18.24■□□□□ 0.51
SMG6-214ENST00000573827 PLK2Q9NYY3 685 aa18.24■□□□□ 0.51
SMG6-214ENST00000573827 STOML2Q9UJZ1 356 aa18.24■□□□□ 0.51
SMG6-214ENST00000573827 INVSQ9Y283 1065 aa18.24■□□□□ 0.51
SMG6-214ENST00000573827 ZNF510Q9Y2H8 683 aa18.24■□□□□ 0.51
SMG6-214ENST00000573827 SLC27A6Q9Y2P4 619 aa18.24■□□□□ 0.51
SMG6-214ENST00000573827 PCDHGA5Q9Y5G8 931 aa18.24■□□□□ 0.51
SMG6-214ENST00000573827 SLC12A8A0AV02 714 aa18.23■□□□□ 0.51
SMG6-214ENST00000573827 MED19A0JLT2 244 aaPredicted RBP18.23■□□□□ 0.51
SMG6-214ENST00000573827 FYNP06241 537 aa18.23■□□□□ 0.51
SMG6-214ENST00000573827 ZNF806P0C7X5 589 aa18.23■□□□□ 0.51
SMG6-214ENST00000573827 P2RY2P41231 377 aa18.23■□□□□ 0.51
SMG6-214ENST00000573827 GPD2P43304 727 aa18.23■□□□□ 0.51
SMG6-214ENST00000573827 APBA1Q02410 837 aa18.23■□□□□ 0.51
SMG6-214ENST00000573827 CCDC6Q16204 474 aa18.23■□□□□ 0.51
SMG6-214ENST00000573827 MAP7D1Q3KQU3 841 aa18.23■□□□□ 0.51
SMG6-214ENST00000573827 PMS2CLQ68D20 193 aa18.23■□□□□ 0.51
SMG6-214ENST00000573827 DPY19L2P1Q6NXN4 242 aa18.23■□□□□ 0.51
SMG6-214ENST00000573827 DENND1CQ8IV53 801 aa18.23■□□□□ 0.51
SMG6-214ENST00000573827 FMNL3Q8IVF7 1028 aa18.23■□□□□ 0.51
SMG6-214ENST00000573827 CLEC4CQ8WTT0 213 aa18.23■□□□□ 0.51
SMG6-214ENST00000573827 EDEM1Q92611 657 aa18.23■□□□□ 0.51
SMG6-214ENST00000573827 BHMTQ93088 406 aa18.23■□□□□ 0.51
SMG6-214ENST00000573827 PLD4Q96BZ4 506 aa18.23■□□□□ 0.51
SMG6-214ENST00000573827 PIWIL1Q96J94 861 aaKnown RBP18.23■□□□□ 0.51
SMG6-214ENST00000573827 HSFY1Q96LI6 401 aa18.23■□□□□ 0.51
SMG6-214ENST00000573827 XPO6Q96QU8 1125 aaKnown RBP18.23■□□□□ 0.51
SMG6-214ENST00000573827 GABRG3Q99928 467 aa18.23■□□□□ 0.51
SMG6-214ENST00000573827 BECN2A8MW95 431 aa18.22■□□□□ 0.51
SMG6-214ENST00000573827 M0QYV0 167 aa18.22■□□□□ 0.51
SMG6-214ENST00000573827 SLC30A4O14863 429 aa18.22■□□□□ 0.51
SMG6-214ENST00000573827 IGLV3-27P01718 113 aa18.22■□□□□ 0.51
SMG6-214ENST00000573827 DGKGP49619 791 aa18.22■□□□□ 0.51
SMG6-214ENST00000573827 MFAP3P55082 362 aa18.22■□□□□ 0.51
SMG6-214ENST00000573827 SF3A2Q15428 464 aaKnown RBP18.22■□□□□ 0.51
SMG6-214ENST00000573827 STILQ15468 1287 aa18.22■□□□□ 0.51
SMG6-214ENST00000573827 PREPLQ4J6C6 727 aaPredicted RBP18.22■□□□□ 0.51
SMG6-214ENST00000573827 RNF43Q68DV7 783 aa18.22■□□□□ 0.51
SMG6-214ENST00000573827 GJB7Q6PEY0 223 aa18.22■□□□□ 0.51
SMG6-214ENST00000573827 TRIM65Q6PJ69 517 aa18.22■□□□□ 0.51
SMG6-214ENST00000573827 RSRC2Q7L4I2 434 aaKnown RBP18.22■□□□□ 0.51
SMG6-214ENST00000573827 DGLUCYQ7Z3D6 616 aa18.22■□□□□ 0.51
SMG6-214ENST00000573827 SIX6OS1Q8N1H7 587 aa18.22■□□□□ 0.51
SMG6-214ENST00000573827 FRMD1Q8N878 549 aa18.22■□□□□ 0.51
SMG6-214ENST00000573827 MLKLQ8NB16 471 aa18.22■□□□□ 0.51
SMG6-214ENST00000573827 IRGQQ8WZA9 623 aa18.22■□□□□ 0.51
SMG6-214ENST00000573827 IPO9Q96P70 1041 aaKnown RBP18.22■□□□□ 0.51
SMG6-214ENST00000573827 CRACR2AQ9BSW2 395 aa18.22■□□□□ 0.51
SMG6-214ENST00000573827 SMOC1Q9H4F8 434 aa18.22■□□□□ 0.51
SMG6-214ENST00000573827 ACP6Q9NPH0 428 aa18.22■□□□□ 0.51
SMG6-214ENST00000573827 SFMBT1Q9UHJ3 866 aa18.22■□□□□ 0.51
SMG6-214ENST00000573827 CYTH4Q9UIA0 394 aa18.22■□□□□ 0.51
SMG6-214ENST00000573827 MBD1Q9UIS9 605 aaPredicted RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms