RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 SKA1Q96BD8 255 aa11.62□□□□□ -0.55
RPAIN-212ENST00000573126 SLC17A6Q9P2U8 582 aa11.62□□□□□ -0.55
RPAIN-212ENST00000573126 LNPEPQ9UIQ6 1025 aa11.62□□□□□ -0.55
RPAIN-212ENST00000573126 GJD2Q9UKL4 321 aa11.62□□□□□ -0.55
RPAIN-212ENST00000573126 AP4E1Q9UPM8 1137 aa11.62□□□□□ -0.55
RPAIN-212ENST00000573126 PLLPQ9Y342 182 aa11.62□□□□□ -0.55
RPAIN-212ENST00000573126 CCDC22O60826 627 aa11.62□□□□□ -0.55
RPAIN-212ENST00000573126 STAU1O95793 577 aaKnown RBP11.62□□□□□ -0.55
RPAIN-212ENST00000573126 TPBGLP0DKB5 382 aa11.62□□□□□ -0.55
RPAIN-212ENST00000573126 DESP17661 470 aa11.62□□□□□ -0.55
RPAIN-212ENST00000573126 HOXA11P31270 313 aaPredicted RBP11.62□□□□□ -0.55
RPAIN-212ENST00000573126 IRX4P78413 519 aa11.62□□□□□ -0.55
RPAIN-212ENST00000573126 BST1Q10588 318 aa11.62□□□□□ -0.55
RPAIN-212ENST00000573126 PPIL2Q13356 520 aa11.62□□□□□ -0.55
RPAIN-212ENST00000573126 DENND5BQ6ZUT9 1274 aa11.62□□□□□ -0.55
RPAIN-212ENST00000573126 TTC39CQ8N584 583 aa11.62□□□□□ -0.55
RPAIN-212ENST00000573126 PTCD3Q96EY7 689 aaKnown RBP11.62□□□□□ -0.55
RPAIN-212ENST00000573126 CDCA5Q96FF9 252 aa11.62□□□□□ -0.55
RPAIN-212ENST00000573126 NMUR2Q9GZQ4 415 aa11.62□□□□□ -0.55
RPAIN-212ENST00000573126 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.61□□□□□ -0.55
RPAIN-212ENST00000573126 HMX2A2RU54 273 aa11.61□□□□□ -0.55
RPAIN-212ENST00000573126 GYG2O15488 501 aa11.61□□□□□ -0.55
RPAIN-212ENST00000573126 AKAP5P24588 427 aa11.61□□□□□ -0.55
RPAIN-212ENST00000573126 LMO2P25791 158 aa11.61□□□□□ -0.55
RPAIN-212ENST00000573126 CPA2P48052 419 aa11.61□□□□□ -0.55
RPAIN-212ENST00000573126 CHI3L2Q15782 390 aa11.61□□□□□ -0.55
RPAIN-212ENST00000573126 SPDYAQ5MJ70 313 aa11.61□□□□□ -0.55
RPAIN-212ENST00000573126 ZNF618Q5T7W0 954 aa11.61□□□□□ -0.55
RPAIN-212ENST00000573126 CDKL3Q8IVW4 592 aaPredicted RBP11.61□□□□□ -0.55
RPAIN-212ENST00000573126 ARID3BQ8IVW6 561 aaPredicted RBP11.61□□□□□ -0.55
RPAIN-212ENST00000573126 NDUFAF2Q8N183 169 aa11.61□□□□□ -0.55
RPAIN-212ENST00000573126 NDRG1Q92597 394 aaKnown RBP11.61□□□□□ -0.55
RPAIN-212ENST00000573126 OXNAD1Q96HP4 312 aaPredicted RBP11.61□□□□□ -0.55
RPAIN-212ENST00000573126 SIGLEC10Q96LC7 697 aa11.61□□□□□ -0.55
RPAIN-212ENST00000573126 CSPG4P5Q96PW8 444 aa11.61□□□□□ -0.55
RPAIN-212ENST00000573126 CEP41Q9BYV8 373 aa11.61□□□□□ -0.55
RPAIN-212ENST00000573126 FRMD8Q9BZ67 464 aaPredicted RBP11.61□□□□□ -0.55
RPAIN-212ENST00000573126 NXF3Q9H4D5 531 aaKnown RBP11.61□□□□□ -0.55
RPAIN-212ENST00000573126 CDHR5Q9HBB8 845 aa11.61□□□□□ -0.55
RPAIN-212ENST00000573126 SETD4Q9NVD3 440 aa11.61□□□□□ -0.55
RPAIN-212ENST00000573126 MTMR10Q9NXD2 777 aa11.61□□□□□ -0.55
RPAIN-212ENST00000573126 ZNF180Q9UJW8 692 aa11.61□□□□□ -0.55
RPAIN-212ENST00000573126 MTO1Q9Y2Z2 717 aaKnown RBP11.61□□□□□ -0.55
RPAIN-212ENST00000573126 I3L4J1 428 aa11.61□□□□□ -0.55
RPAIN-212ENST00000573126 FCHO1O14526 889 aa11.61□□□□□ -0.55
RPAIN-212ENST00000573126 KRT38O76015 456 aa11.61□□□□□ -0.55
RPAIN-212ENST00000573126 TGDSO95455 350 aa11.61□□□□□ -0.55
RPAIN-212ENST00000573126 GOT1P17174 413 aa11.61□□□□□ -0.55
RPAIN-212ENST00000573126 GNAZP19086 355 aa11.61□□□□□ -0.55
RPAIN-212ENST00000573126 AMPD1P23109 780 aa11.61□□□□□ -0.55
RPAIN-212ENST00000573126 MAGEA3P43357 314 aa11.61□□□□□ -0.55
RPAIN-212ENST00000573126 MAGEA6P43360 314 aa11.61□□□□□ -0.55
RPAIN-212ENST00000573126 SESN3P58005 492 aa11.61□□□□□ -0.55
RPAIN-212ENST00000573126 TAF11Q15544 211 aa11.61□□□□□ -0.55
RPAIN-212ENST00000573126 DPYSL2Q16555 572 aa11.61□□□□□ -0.55
RPAIN-212ENST00000573126 LGSNQ5TDP6 509 aa11.61□□□□□ -0.55
RPAIN-212ENST00000573126 BSPRYQ5W0U4 402 aa11.61□□□□□ -0.55
RPAIN-212ENST00000573126 HEATR6Q6AI08 1181 aaKnown RBP11.61□□□□□ -0.55
RPAIN-212ENST00000573126 TRIM68Q6AZZ1 485 aa11.61□□□□□ -0.55
RPAIN-212ENST00000573126 CASC4Q6P4E1 433 aa11.61□□□□□ -0.55
RPAIN-212ENST00000573126 ZCCHC23Q6ZST2 131 aa11.61□□□□□ -0.55
RPAIN-212ENST00000573126 BZW1Q7L1Q6 419 aaKnown RBP11.61□□□□□ -0.55
RPAIN-212ENST00000573126 FASTKD5Q7L8L6 764 aaKnown RBP11.61□□□□□ -0.55
RPAIN-212ENST00000573126 APBB1IPQ7Z5R6 666 aaPredicted RBP11.61□□□□□ -0.55
RPAIN-212ENST00000573126 FAM131BQ86XD5 332 aa11.61□□□□□ -0.55
RPAIN-212ENST00000573126 NT5DC4Q86YG4 428 aa11.61□□□□□ -0.55
RPAIN-212ENST00000573126 GSDMBQ8TAX9 411 aa11.61□□□□□ -0.55
RPAIN-212ENST00000573126 KCTD15Q96SI1 283 aaPredicted RBP11.61□□□□□ -0.55
RPAIN-212ENST00000573126 LGMNQ99538 433 aa11.61□□□□□ -0.55
RPAIN-212ENST00000573126 EBNA1BP2Q99848 306 aaKnown RBP11.61□□□□□ -0.55
RPAIN-212ENST00000573126 BTBD10Q9BSF8 475 aa11.61□□□□□ -0.55
RPAIN-212ENST00000573126 DTLQ9NZJ0 730 aa11.61□□□□□ -0.55
RPAIN-212ENST00000573126 TRIP11Q15643 1979 aa11.61□□□□□ -0.55
RPAIN-212ENST00000573126 SYNJ2BP-COX16A0A087WUM0 186 aa11.6□□□□□ -0.55
RPAIN-212ENST00000573126 TRDMT1O14717 391 aaKnown RBP11.6□□□□□ -0.55
RPAIN-212ENST00000573126 GJA5P36382 358 aa11.6□□□□□ -0.55
RPAIN-212ENST00000573126 KHDC1Q4VXA5 237 aaKnown RBP11.6□□□□□ -0.55
RPAIN-212ENST00000573126 MDH1BQ5I0G3 518 aa11.6□□□□□ -0.55
RPAIN-212ENST00000573126 C4orf50Q6ZRC1 276 aa11.6□□□□□ -0.55
RPAIN-212ENST00000573126 CATSPER4Q7RTX7 472 aa11.6□□□□□ -0.55
RPAIN-212ENST00000573126 MCUQ8NE86 351 aa11.6□□□□□ -0.55
RPAIN-212ENST00000573126 DEPDC1BQ8WUY9 529 aa11.6□□□□□ -0.55
RPAIN-212ENST00000573126 USP6NLQ92738 828 aa11.6□□□□□ -0.55
RPAIN-212ENST00000573126 E2F7Q96AV8 911 aa11.6□□□□□ -0.55
RPAIN-212ENST00000573126 NSL1Q96IY1 281 aa11.6□□□□□ -0.55
RPAIN-212ENST00000573126 SNX27Q96L92 541 aa11.6□□□□□ -0.55
RPAIN-212ENST00000573126 OSMRQ99650 979 aa11.6□□□□□ -0.55
RPAIN-212ENST00000573126 C20orf27Q9GZN8 174 aa11.6□□□□□ -0.55
RPAIN-212ENST00000573126 TLE6Q9H808 572 aa11.6□□□□□ -0.55
RPAIN-212ENST00000573126 TMPRSS4Q9NRS4 437 aa11.6□□□□□ -0.55
RPAIN-212ENST00000573126 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.6□□□□□ -0.55
RPAIN-212ENST00000573126 COX16Q9P0S2 106 aa11.6□□□□□ -0.55
RPAIN-212ENST00000573126 CITO14578 2027 aa11.6□□□□□ -0.55
RPAIN-212ENST00000573126 GCATO75600 419 aa11.6□□□□□ -0.55
RPAIN-212ENST00000573126 ESRRAP11474 423 aaPredicted RBP11.6□□□□□ -0.55
RPAIN-212ENST00000573126 ZNF792Q3KQV3 632 aa11.6□□□□□ -0.55
RPAIN-212ENST00000573126 NCBP2-AS2Q69YL0 99 aa11.6□□□□□ -0.55
RPAIN-212ENST00000573126 RINLQ6ZS11 566 aa11.6□□□□□ -0.55
RPAIN-212ENST00000573126 NUDCD3Q8IVD9 361 aa11.6□□□□□ -0.55
RPAIN-212ENST00000573126 MCUR1Q96AQ8 359 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms