RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 LMNAP02545 664 aaKnown RBP7.86□□□□□ -1.15
NUP88-205ENST00000572809 ARSAP15289 507 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 TCF3P15923 654 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 CD58P19256 250 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 MZF1P28698 734 aaPredicted RBP7.86□□□□□ -1.15
NUP88-205ENST00000572809 ADORA2BP29275 332 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 MAP2K3P46734 347 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 CXCL12P48061 93 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 IFNAR2P48551 515 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 MXI1P50539 228 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 GALK1P51570 392 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 CCR3P51677 355 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 SLC5A3P53794 718 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 NRLP54845 237 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 SLC7A9P82251 487 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 ZXDBP98169 803 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 INCA1Q0VD86 236 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 GRSF1Q12849 480 aaKnown RBP eCLIP7.86□□□□□ -1.15
NUP88-205ENST00000572809 ZNF77Q15935 545 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 C4orf17Q53FE4 359 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 SNX30Q5VWJ9 437 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 TSSK4Q6SA08 328 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 C1orf229Q6ZS94 237 aaPredicted RBP7.86□□□□□ -1.15
NUP88-205ENST00000572809 ZC3H3Q8IXZ2 948 aaKnown RBP7.86□□□□□ -1.15
NUP88-205ENST00000572809 ADGRG2Q8IZP9 1017 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 SYNPOQ8N3V7 929 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 SPEM1Q8N4L4 309 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 CPA6Q8N4T0 437 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 TTC39CQ8N584 583 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 PDZD8Q8NEN9 1154 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 ZMIZ2Q8NF64 920 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 SCAMP5Q8TAC9 235 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 SEMA4DQ92854 862 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 FBXO32Q969P5 355 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 EXOC4Q96A65 974 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 HEXIM2Q96MH2 286 aaKnown RBP7.86□□□□□ -1.15
NUP88-205ENST00000572809 TWNKQ96RR1 684 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 HNRNPABQ99729 332 aaKnown RBP7.86□□□□□ -1.15
NUP88-205ENST00000572809 FAM126AQ9BYI3 521 aaPredicted RBP7.86□□□□□ -1.15
NUP88-205ENST00000572809 NIF3L1Q9GZT8 377 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 ECT2Q9H8V3 914 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 METTL14Q9HCE5 456 aaKnown RBP7.86□□□□□ -1.15
NUP88-205ENST00000572809 CSNK1G1Q9HCP0 422 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 KRT82Q9NSB4 513 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 RBM12Q9NTZ6 932 aaKnown RBP7.86□□□□□ -1.15
NUP88-205ENST00000572809 FAM49BQ9NUQ9 324 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 ZSCAN32Q9NX65 697 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 ZDHHC3Q9NYG2 299 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 CHMP5Q9NZZ3 219 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 HMGXB4Q9UGU5 601 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 ARMCX3Q9UH62 379 aaPredicted RBP7.86□□□□□ -1.15
NUP88-205ENST00000572809 GPC6Q9Y625 555 aaPredicted RBP7.86□□□□□ -1.15
NUP88-205ENST00000572809 WNT6Q9Y6F9 365 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 PIEZO1Q92508 2521 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 ZNF638Q14966 1978 aaKnown RBP7.86□□□□□ -1.15
NUP88-205ENST00000572809 CACNA1IQ9P0X4 2223 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 ZFHX2Q9C0A1 2572 aaPredicted RBP7.85□□□□□ -1.15
NUP88-205ENST00000572809 F5P12259 2224 aa7.85□□□□□ -1.15
NUP88-205ENST00000572809 FAM92AA1XBS5 289 aa7.85□□□□□ -1.15
NUP88-205ENST00000572809 OLFM2O95897 454 aa7.85□□□□□ -1.15
NUP88-205ENST00000572809 OAS1P00973 400 aaKnown RBP7.85□□□□□ -1.15
NUP88-205ENST00000572809 RPLP1P05386 114 aaKnown RBP7.85□□□□□ -1.15
NUP88-205ENST00000572809 FAM200BP0CF97 657 aa7.85□□□□□ -1.15
NUP88-205ENST00000572809 MBL2P11226 248 aaPredicted RBP7.85□□□□□ -1.15
NUP88-205ENST00000572809 BMP6P22004 513 aa7.85□□□□□ -1.15
NUP88-205ENST00000572809 GJA4P35212 333 aa7.85□□□□□ -1.15
NUP88-205ENST00000572809 PLA2G4AP47712 749 aa7.85□□□□□ -1.15
NUP88-205ENST00000572809 CCINQ13939 588 aa7.85□□□□□ -1.15
NUP88-205ENST00000572809 MORC3Q14149 939 aa7.85□□□□□ -1.15
NUP88-205ENST00000572809 CBWD6Q4V339 395 aa7.85□□□□□ -1.15
NUP88-205ENST00000572809 ZNF394Q53GI3 561 aa7.85□□□□□ -1.15
NUP88-205ENST00000572809 DCAF17Q5H9S7 520 aaPredicted RBP7.85□□□□□ -1.15
NUP88-205ENST00000572809 TMEM196Q5HYL7 178 aa7.85□□□□□ -1.15
NUP88-205ENST00000572809 CBWD3Q5JTY5 395 aa7.85□□□□□ -1.15
NUP88-205ENST00000572809 CBWD5Q5RIA9 395 aa7.85□□□□□ -1.15
NUP88-205ENST00000572809 HECTD3Q5T447 861 aa7.85□□□□□ -1.15
NUP88-205ENST00000572809 KLHL10Q6JEL2 608 aa7.85□□□□□ -1.15
NUP88-205ENST00000572809 CLEC20AQ6ZU45 233 aa7.85□□□□□ -1.15
NUP88-205ENST00000572809 KRTAP1-3Q8IUG1 177 aa7.85□□□□□ -1.15
NUP88-205ENST00000572809 KIAA1958Q8N8K9 716 aa7.85□□□□□ -1.15
NUP88-205ENST00000572809 ZBTB44Q8NCP5 570 aa7.85□□□□□ -1.15
NUP88-205ENST00000572809 NELL1Q92832 810 aa7.85□□□□□ -1.15
NUP88-205ENST00000572809 ATP2A3Q93084 1043 aa7.85□□□□□ -1.15
NUP88-205ENST00000572809 TMEM176AQ96HP8 235 aa7.85□□□□□ -1.15
NUP88-205ENST00000572809 CEP63Q96MT8 703 aa7.85□□□□□ -1.15
NUP88-205ENST00000572809 FBXO44Q9H4M3 255 aa7.85□□□□□ -1.15
NUP88-205ENST00000572809 FBRSL1Q9HCM7 1045 aaKnown RBP7.85□□□□□ -1.15
NUP88-205ENST00000572809 PRMT8Q9NR22 394 aaPredicted RBP7.85□□□□□ -1.15
NUP88-205ENST00000572809 CISHQ9NSE2 258 aa7.85□□□□□ -1.15
NUP88-205ENST00000572809 COQ4Q9Y3A0 265 aa7.85□□□□□ -1.15
NUP88-205ENST00000572809 PCDHGA2Q9Y5H1 932 aa7.85□□□□□ -1.15
NUP88-205ENST00000572809 CPQQ9Y646 472 aa7.85□□□□□ -1.15
NUP88-205ENST00000572809 COL4A2P08572 1712 aa7.85□□□□□ -1.15
NUP88-205ENST00000572809 GREB1Q4ZG55 1949 aa7.85□□□□□ -1.15
NUP88-205ENST00000572809 OBSL1O75147 1896 aa7.85□□□□□ -1.15
NUP88-205ENST00000572809 PTPRDP23468 1912 aa7.84□□□□□ -1.15
NUP88-205ENST00000572809 ANAPC1Q9H1A4 1944 aa7.84□□□□□ -1.15
NUP88-205ENST00000572809 BICDL2A1A5D9 508 aa7.84□□□□□ -1.15
NUP88-205ENST00000572809 HHLA1C9JL84 531 aa7.84□□□□□ -1.15
NUP88-205ENST00000572809 BIN1O00499 593 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms