RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 RALAP11233 206 aa19■□□□□ 0.63
CHD3-214ENST00000572579 NTSR1P30989 418 aa19■□□□□ 0.63
CHD3-214ENST00000572579 FMO5P49326 533 aa19■□□□□ 0.63
CHD3-214ENST00000572579 DHPSP49366 369 aaPredicted RBP19■□□□□ 0.63
CHD3-214ENST00000572579 YWHAGP61981 247 aaKnown RBP eCLIP19■□□□□ 0.63
CHD3-214ENST00000572579 N4BP2L1Q5TBK1 243 aaPredicted RBP19■□□□□ 0.63
CHD3-214ENST00000572579 TTC39CQ8N584 583 aa19■□□□□ 0.63
CHD3-214ENST00000572579 DEFB119Q8N690 84 aa19■□□□□ 0.63
CHD3-214ENST00000572579 RBBP8NLQ8NC74 664 aaPredicted RBP19■□□□□ 0.63
CHD3-214ENST00000572579 GABRG3Q99928 467 aa19■□□□□ 0.63
CHD3-214ENST00000572579 SLC6A17Q9H1V8 727 aa19■□□□□ 0.63
CHD3-214ENST00000572579 FAM124BQ9H5Z6 455 aaPredicted RBP19■□□□□ 0.63
CHD3-214ENST00000572579 MARCH2Q9P0N8 246 aa19■□□□□ 0.63
CHD3-214ENST00000572579 LSM7Q9UK45 103 aaKnown RBP19■□□□□ 0.63
CHD3-214ENST00000572579 RAD54BQ9Y620 910 aa19■□□□□ 0.63
CHD3-214ENST00000572579 YJEFN3A6XGL0 299 aa18.99■□□□□ 0.63
CHD3-214ENST00000572579 C4orf47A7E2U8 309 aa18.99■□□□□ 0.63
CHD3-214ENST00000572579 E7ENQ6 273 aa18.99■□□□□ 0.63
CHD3-214ENST00000572579 ZBED1O96006 694 aa18.99■□□□□ 0.63
CHD3-214ENST00000572579 HOXB2P14652 356 aa18.99■□□□□ 0.63
CHD3-214ENST00000572579 TRIM21P19474 475 aaKnown RBP18.99■□□□□ 0.63
CHD3-214ENST00000572579 CORO1AP31146 461 aaKnown RBP18.99■□□□□ 0.63
CHD3-214ENST00000572579 DGKGP49619 791 aa18.99■□□□□ 0.63
CHD3-214ENST00000572579 GEN1Q17RS7 908 aa18.99■□□□□ 0.63
CHD3-214ENST00000572579 RNF43Q68DV7 783 aa18.99■□□□□ 0.63
CHD3-214ENST00000572579 IL31Q6EBC2 164 aa18.99■□□□□ 0.63
CHD3-214ENST00000572579 ARMCX6Q7L4S7 300 aa18.99■□□□□ 0.63
CHD3-214ENST00000572579 DENND1CQ8IV53 801 aa18.99■□□□□ 0.63
CHD3-214ENST00000572579 IPO4Q8TEX9 1081 aaKnown RBP18.99■□□□□ 0.63
CHD3-214ENST00000572579 PIGKQ92643 395 aa18.99■□□□□ 0.63
CHD3-214ENST00000572579 CCDC34Q96HJ3 373 aa18.99■□□□□ 0.63
CHD3-214ENST00000572579 DHTKD1Q96HY7 919 aaPredicted RBP18.99■□□□□ 0.63
CHD3-214ENST00000572579 XPO6Q96QU8 1125 aaKnown RBP18.99■□□□□ 0.63
CHD3-214ENST00000572579 CACNA2D2Q9NY47 1150 aa18.99■□□□□ 0.63
CHD3-214ENST00000572579 CALCOCO1Q9P1Z2 691 aa18.99■□□□□ 0.63
CHD3-214ENST00000572579 BCCIPQ9P287 314 aaKnown RBP eCLIP18.99■□□□□ 0.63
CHD3-214ENST00000572579 SLC12A8A0AV02 714 aa18.98■□□□□ 0.63
CHD3-214ENST00000572579 GFRA2O00451 464 aa18.98■□□□□ 0.63
CHD3-214ENST00000572579 XPO1O14980 1071 aaKnown RBP18.98■□□□□ 0.63
CHD3-214ENST00000572579 PMM2O15305 246 aa18.98■□□□□ 0.63
CHD3-214ENST00000572579 NDUFV2P19404 249 aa18.98■□□□□ 0.63
CHD3-214ENST00000572579 MFAP3P55082 362 aa18.98■□□□□ 0.63
CHD3-214ENST00000572579 COG7P83436 770 aa18.98■□□□□ 0.63
CHD3-214ENST00000572579 GOLGA8FQ08AF8 430 aa18.98■□□□□ 0.63
CHD3-214ENST00000572579 GOLGA8DPQ0D2H9 430 aa18.98■□□□□ 0.63
CHD3-214ENST00000572579 MORC3Q14149 939 aa18.98■□□□□ 0.63
CHD3-214ENST00000572579 BECN1Q14457 450 aa18.98■□□□□ 0.63
CHD3-214ENST00000572579 TMEM215Q68D42 235 aa18.98■□□□□ 0.63
CHD3-214ENST00000572579 C11orf74Q86VG3 221 aa18.98■□□□□ 0.63
CHD3-214ENST00000572579 FAM217AQ8IXS0 508 aa18.98■□□□□ 0.63
CHD3-214ENST00000572579 PGBD3Q8N328 593 aa18.98■□□□□ 0.63
CHD3-214ENST00000572579 PIWIL1Q96J94 861 aaKnown RBP18.98■□□□□ 0.63
CHD3-214ENST00000572579 EDEM2Q9BV94 578 aa18.98■□□□□ 0.63
CHD3-214ENST00000572579 CIZ1Q9ULV3 898 aaPredicted RBP18.98■□□□□ 0.63
CHD3-214ENST00000572579 CHD8Q9HCK8 2581 aa18.98■□□□□ 0.63
CHD3-214ENST00000572579 GIPC1O14908 333 aa18.97■□□□□ 0.63
CHD3-214ENST00000572579 CD19P15391 556 aa18.97■□□□□ 0.63
CHD3-214ENST00000572579 ITPKAP23677 461 aa18.97■□□□□ 0.63
CHD3-214ENST00000572579 BCAT1P54687 386 aa18.97■□□□□ 0.63
CHD3-214ENST00000572579 TRIP4Q15650 581 aaPredicted RBP18.97■□□□□ 0.63
CHD3-214ENST00000572579 PREPLQ4J6C6 727 aaPredicted RBP18.97■□□□□ 0.63
CHD3-214ENST00000572579 SGO2Q562F6 1265 aa18.97■□□□□ 0.63
CHD3-214ENST00000572579 BSPRYQ5W0U4 402 aa18.97■□□□□ 0.63
CHD3-214ENST00000572579 KLHL10Q6JEL2 608 aa18.97■□□□□ 0.63
CHD3-214ENST00000572579 PMF1Q6P1K2 205 aa18.97■□□□□ 0.63
CHD3-214ENST00000572579 LPCAT2Q7L5N7 544 aa18.97■□□□□ 0.63
CHD3-214ENST00000572579 CYP2U1Q7Z449 544 aa18.97■□□□□ 0.63
CHD3-214ENST00000572579 TRMT11Q7Z4G4 463 aaKnown RBP18.97■□□□□ 0.63
CHD3-214ENST00000572579 TADA2BQ86TJ2 420 aa18.97■□□□□ 0.63
CHD3-214ENST00000572579 CHPFQ8IZ52 775 aa18.97■□□□□ 0.63
CHD3-214ENST00000572579 SLC35F5Q8WV83 523 aa18.97■□□□□ 0.63
CHD3-214ENST00000572579 EDEM1Q92611 657 aa18.97■□□□□ 0.63
CHD3-214ENST00000572579 CEP63Q96MT8 703 aa18.97■□□□□ 0.63
CHD3-214ENST00000572579 FSCN3Q9NQT6 498 aa18.97■□□□□ 0.63
CHD3-214ENST00000572579 SFMBT1Q9UHJ3 866 aa18.97■□□□□ 0.63
CHD3-214ENST00000572579 SLC27A6Q9Y2P4 619 aa18.97■□□□□ 0.63
CHD3-214ENST00000572579 IGHV1OR15-9A0A0B4J2B8 117 aa18.96■□□□□ 0.63
CHD3-214ENST00000572579 BIN1O00499 593 aa18.96■□□□□ 0.63
CHD3-214ENST00000572579 PSMA7O14818 248 aa18.96■□□□□ 0.63
CHD3-214ENST00000572579 KHNYNO15037 678 aaKnown RBP18.96■□□□□ 0.63
CHD3-214ENST00000572579 KCNK5O95279 499 aa18.96■□□□□ 0.63
CHD3-214ENST00000572579 VDRP11473 427 aa18.96■□□□□ 0.63
CHD3-214ENST00000572579 ADIGQ0VDE8 80 aa18.96■□□□□ 0.63
CHD3-214ENST00000572579 BST2Q10589 180 aaKnown RBP18.96■□□□□ 0.63
CHD3-214ENST00000572579 TMEM270Q6UE05 265 aa18.96■□□□□ 0.63
CHD3-214ENST00000572579 LCLAT1Q6UWP7 414 aa18.96■□□□□ 0.63
CHD3-214ENST00000572579 ARHGEF19Q8IW93 802 aa18.96■□□□□ 0.63
CHD3-214ENST00000572579 ARHGAP18Q8N392 663 aa18.96■□□□□ 0.63
CHD3-214ENST00000572579 NELFBQ8WX92 580 aa18.96■□□□□ 0.63
CHD3-214ENST00000572579 SORCS1Q8WY21 1168 aa18.96■□□□□ 0.63
CHD3-214ENST00000572579 KCTD13Q8WZ19 329 aa18.96■□□□□ 0.63
CHD3-214ENST00000572579 MRGPRX1Q96LB2 322 aa18.96■□□□□ 0.63
CHD3-214ENST00000572579 MED15Q96RN5 788 aa18.96■□□□□ 0.63
CHD3-214ENST00000572579 CDK5RAP1Q96SZ6 601 aaKnown RBP18.96■□□□□ 0.63
CHD3-214ENST00000572579 METTL14Q9HCE5 456 aaKnown RBP18.96■□□□□ 0.63
CHD3-214ENST00000572579 PILRBQ9UKJ0 227 aa18.96■□□□□ 0.63
CHD3-214ENST00000572579 MYH10P35580 1976 aa18.95■□□□□ 0.62
CHD3-214ENST00000572579 PIK3R2O00459 728 aa18.95■□□□□ 0.62
CHD3-214ENST00000572579 MAP3K13O43283 966 aa18.95■□□□□ 0.62
CHD3-214ENST00000572579 KCNA4P22459 653 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms