RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 YWHAGP61981 247 aaKnown RBP eCLIP20.18■□□□□ 0.82
RPAIN-210ENST00000571613 XRCC4Q13426 336 aa20.18■□□□□ 0.82
RPAIN-210ENST00000571613 TRIP13Q15645 432 aaPredicted RBP20.18■□□□□ 0.82
RPAIN-210ENST00000571613 MON1AQ86VX9 555 aa20.18■□□□□ 0.82
RPAIN-210ENST00000571613 PQLC3Q8N755 202 aa20.18■□□□□ 0.82
RPAIN-210ENST00000571613 CSPG4P5Q96PW8 444 aa20.18■□□□□ 0.82
RPAIN-210ENST00000571613 KCTD15Q96SI1 283 aaPredicted RBP20.18■□□□□ 0.82
RPAIN-210ENST00000571613 TMEM121Q9BTD3 319 aa20.18■□□□□ 0.82
RPAIN-210ENST00000571613 TXLNGYQ9BZA5 131 aa20.18■□□□□ 0.82
RPAIN-210ENST00000571613 PIGVQ9NUD9 493 aa20.18■□□□□ 0.82
RPAIN-210ENST00000571613 MTMR10Q9NXD2 777 aa20.18■□□□□ 0.82
RPAIN-210ENST00000571613 SCML2Q9UQR0 700 aa20.18■□□□□ 0.82
RPAIN-210ENST00000571613 FNDC1Q4ZHG4 1894 aaPredicted RBP20.18■□□□□ 0.82
RPAIN-210ENST00000571613 CDR1P51861 262 aa20.17■□□□□ 0.82
RPAIN-210ENST00000571613 RABGGTBP53611 331 aa20.17■□□□□ 0.82
RPAIN-210ENST00000571613 ITGA8P53708 1063 aa20.17■□□□□ 0.82
RPAIN-210ENST00000571613 PMS2P54278 862 aa20.17■□□□□ 0.82
RPAIN-210ENST00000571613 DARS2Q6PI48 645 aaKnown RBP20.17■□□□□ 0.82
RPAIN-210ENST00000571613 RHBDF2Q6PJF5 856 aa20.17■□□□□ 0.82
RPAIN-210ENST00000571613 UBLCP1Q8WVY7 318 aaPredicted RBP20.17■□□□□ 0.82
RPAIN-210ENST00000571613 CWH43Q9H720 699 aa20.17■□□□□ 0.82
RPAIN-210ENST00000571613 WDR6Q9NNW5 1121 aaKnown RBP20.17■□□□□ 0.82
RPAIN-210ENST00000571613 PRDM5Q9NQX1 630 aaPredicted RBP20.17■□□□□ 0.82
RPAIN-210ENST00000571613 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.17■□□□□ 0.82
RPAIN-210ENST00000571613 CALCOCO1Q9P1Z2 691 aa20.17■□□□□ 0.82
RPAIN-210ENST00000571613 BACE2Q9Y5Z0 518 aa20.17■□□□□ 0.82
RPAIN-210ENST00000571613 NLRC5Q86WI3 1866 aa20.17■□□□□ 0.82
RPAIN-210ENST00000571613 NT5C1B-RDH14C9J2C7 533 aa20.16■□□□□ 0.82
RPAIN-210ENST00000571613 DNALI1O14645 258 aaPredicted RBP20.16■□□□□ 0.82
RPAIN-210ENST00000571613 IFNB1P01574 187 aa20.16■□□□□ 0.82
RPAIN-210ENST00000571613 PECAM1P16284 738 aaPredicted RBP20.16■□□□□ 0.82
RPAIN-210ENST00000571613 OAS2P29728 719 aaKnown RBP20.16■□□□□ 0.82
RPAIN-210ENST00000571613 ACTN2P35609 894 aa20.16■□□□□ 0.82
RPAIN-210ENST00000571613 GGCXP38435 758 aa20.16■□□□□ 0.82
RPAIN-210ENST00000571613 HCAR3P49019 387 aa20.16■□□□□ 0.82
RPAIN-210ENST00000571613 CXCR3P49682 368 aa20.16■□□□□ 0.82
RPAIN-210ENST00000571613 EIF3BP55884 814 aaKnown RBP20.16■□□□□ 0.82
RPAIN-210ENST00000571613 RPL10AP62906 217 aaKnown RBP20.16■□□□□ 0.82
RPAIN-210ENST00000571613 MORF4L2Q15014 288 aa20.16■□□□□ 0.82
RPAIN-210ENST00000571613 IZUMO3Q5VZ72 239 aa20.16■□□□□ 0.82
RPAIN-210ENST00000571613 C4orf22Q6V702 233 aa20.16■□□□□ 0.82
RPAIN-210ENST00000571613 CMTR2Q8IYT2 770 aaKnown RBP20.16■□□□□ 0.82
RPAIN-210ENST00000571613 SCAMP5Q8TAC9 235 aa20.16■□□□□ 0.82
RPAIN-210ENST00000571613 ZNF689Q96CS4 500 aaPredicted RBP20.16■□□□□ 0.82
RPAIN-210ENST00000571613 IGSF21Q96ID5 467 aa20.16■□□□□ 0.82
RPAIN-210ENST00000571613 SPATA17Q96L03 361 aa20.16■□□□□ 0.82
RPAIN-210ENST00000571613 WDCPQ9H6R7 721 aa20.16■□□□□ 0.82
RPAIN-210ENST00000571613 IL37Q9NZH6 218 aa20.16■□□□□ 0.82
RPAIN-210ENST00000571613 CWC15Q9P013 229 aaKnown RBP20.16■□□□□ 0.82
RPAIN-210ENST00000571613 SAE1Q9UBE0 346 aaPredicted RBP20.16■□□□□ 0.82
RPAIN-210ENST00000571613 TPX2Q9ULW0 747 aaKnown RBP20.16■□□□□ 0.82
RPAIN-210ENST00000571613 ATP8A1Q9Y2Q0 1164 aa20.16■□□□□ 0.82
RPAIN-210ENST00000571613 SYNJ2BP-COX16A0A087WUM0 186 aa20.16■□□□□ 0.82
RPAIN-210ENST00000571613 BCLAF3A2AJT9 711 aaKnown RBP20.16■□□□□ 0.82
RPAIN-210ENST00000571613 GOLGA8KD6RF30 607 aa20.16■□□□□ 0.82
RPAIN-210ENST00000571613 H7C0C1 242 aa20.16■□□□□ 0.82
RPAIN-210ENST00000571613 EFEMP2O95967 443 aa20.16■□□□□ 0.82
RPAIN-210ENST00000571613 ATP5OP48047 213 aa20.16■□□□□ 0.82
RPAIN-210ENST00000571613 PSEN1P49768 467 aa20.16■□□□□ 0.82
RPAIN-210ENST00000571613 PITX1P78337 314 aaPredicted RBP20.16■□□□□ 0.82
RPAIN-210ENST00000571613 GPS1Q13098 491 aa20.16■□□□□ 0.82
RPAIN-210ENST00000571613 P3H1Q32P28 736 aa20.16■□□□□ 0.82
RPAIN-210ENST00000571613 BRMS1LQ5PSV4 323 aa20.16■□□□□ 0.82
RPAIN-210ENST00000571613 RTP2Q5QGT7 225 aa20.16■□□□□ 0.82
RPAIN-210ENST00000571613 SPOUT1Q5T280 376 aaKnown RBP20.16■□□□□ 0.82
RPAIN-210ENST00000571613 HIBCHQ6NVY1 386 aaPredicted RBP20.16■□□□□ 0.82
RPAIN-210ENST00000571613 PDZD4Q76G19 769 aaPredicted RBP20.16■□□□□ 0.82
RPAIN-210ENST00000571613 TRMT10CQ7L0Y3 403 aaKnown RBP20.16■□□□□ 0.82
RPAIN-210ENST00000571613 CROCCP2Q86T23 111 aa20.16■□□□□ 0.82
RPAIN-210ENST00000571613 CDKL3Q8IVW4 592 aaPredicted RBP20.16■□□□□ 0.82
RPAIN-210ENST00000571613 RNF139Q8WU17 664 aa20.16■□□□□ 0.82
RPAIN-210ENST00000571613 PIK3R5Q8WYR1 880 aa20.16■□□□□ 0.82
RPAIN-210ENST00000571613 VWCEQ96DN2 955 aa20.16■□□□□ 0.82
RPAIN-210ENST00000571613 ZNF558Q96NG5 402 aa20.16■□□□□ 0.82
RPAIN-210ENST00000571613 ZIM3Q96PE6 472 aa20.16■□□□□ 0.82
RPAIN-210ENST00000571613 PABPC3Q9H361 631 aaKnown RBP20.16■□□□□ 0.82
RPAIN-210ENST00000571613 COX16Q9P0S2 106 aa20.16■□□□□ 0.82
RPAIN-210ENST00000571613 MTRRQ9UBK8 725 aa20.16■□□□□ 0.82
RPAIN-210ENST00000571613 STK39Q9UEW8 545 aa20.16■□□□□ 0.82
RPAIN-210ENST00000571613 PATJQ8NI35 1801 aa20.15■□□□□ 0.82
RPAIN-210ENST00000571613 MTMR11A4FU01 709 aa20.15■□□□□ 0.82
RPAIN-210ENST00000571613 AGPSO00116 658 aa20.15■□□□□ 0.82
RPAIN-210ENST00000571613 LAG3P18627 525 aa20.15■□□□□ 0.82
RPAIN-210ENST00000571613 VPS41P49754 854 aa20.15■□□□□ 0.82
RPAIN-210ENST00000571613 CBX1P83916 185 aa20.15■□□□□ 0.82
RPAIN-210ENST00000571613 SLC8B1Q6J4K2 584 aa20.15■□□□□ 0.82
RPAIN-210ENST00000571613 KIAA1841Q6NSI8 718 aa20.15■□□□□ 0.82
RPAIN-210ENST00000571613 C1orf228Q6PIY5 440 aa20.15■□□□□ 0.82
RPAIN-210ENST00000571613 KCNT2Q6UVM3 1135 aa20.15■□□□□ 0.82
RPAIN-210ENST00000571613 RNF168Q8IYW5 571 aaPredicted RBP20.15■□□□□ 0.82
RPAIN-210ENST00000571613 DQX1Q8TE96 717 aaKnown RBP20.15■□□□□ 0.82
RPAIN-210ENST00000571613 EDEM1Q92611 657 aa20.15■□□□□ 0.82
RPAIN-210ENST00000571613 SH3GL2Q99962 352 aa20.15■□□□□ 0.82
RPAIN-210ENST00000571613 FERMT1Q9BQL6 677 aa20.15■□□□□ 0.82
RPAIN-210ENST00000571613 HCSTQ9UBK5 93 aa20.15■□□□□ 0.82
RPAIN-210ENST00000571613 HEY1Q9Y5J3 304 aa20.15■□□□□ 0.82
RPAIN-210ENST00000571613 RAD54BQ9Y620 910 aa20.15■□□□□ 0.82
RPAIN-210ENST00000571613 COL4A4P53420 1690 aaPredicted RBP20.15■□□□□ 0.82
RPAIN-210ENST00000571613 TRIM43BA6NCK2 446 aa20.14■□□□□ 0.81
RPAIN-210ENST00000571613 GOLGA6L10A6NI86 522 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms