RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 LAMA1P25391 3075 aa14.01□□□□□ -0.17
CCDC40-205ENST00000571028 H0Y626 953 aa14□□□□□ -0.17
CCDC40-205ENST00000571028 M0QYV0 167 aa14□□□□□ -0.17
CCDC40-205ENST00000571028 CDX4O14627 284 aaPredicted RBP14□□□□□ -0.17
CCDC40-205ENST00000571028 TRIM16O95361 564 aa14□□□□□ -0.17
CCDC40-205ENST00000571028 TPM3P06753 285 aa14□□□□□ -0.17
CCDC40-205ENST00000571028 CSH1P0DML2 217 aa14□□□□□ -0.17
CCDC40-205ENST00000571028 CSH2P0DML3 217 aa14□□□□□ -0.17
CCDC40-205ENST00000571028 STAT1P42224 750 aa14□□□□□ -0.17
CCDC40-205ENST00000571028 GALK1P51570 392 aa14□□□□□ -0.17
CCDC40-205ENST00000571028 ZNF132P52740 706 aa14□□□□□ -0.17
CCDC40-205ENST00000571028 ATXN3P54252 364 aaPredicted RBP14□□□□□ -0.17
CCDC40-205ENST00000571028 IRX4P78413 519 aa14□□□□□ -0.17
CCDC40-205ENST00000571028 PTK2Q05397 1052 aa14□□□□□ -0.17
CCDC40-205ENST00000571028 PDGFRLQ15198 375 aa14□□□□□ -0.17
CCDC40-205ENST00000571028 TRIM61Q5EBN2 209 aa14□□□□□ -0.17
CCDC40-205ENST00000571028 TAF3Q5VWG9 929 aa14□□□□□ -0.17
CCDC40-205ENST00000571028 ARHGAP17Q68EM7 881 aa14□□□□□ -0.17
CCDC40-205ENST00000571028 SLC47A2Q86VL8 602 aa14□□□□□ -0.17
CCDC40-205ENST00000571028 TTC30AQ86WT1 665 aa14□□□□□ -0.17
CCDC40-205ENST00000571028 ZMIZ2Q8NF64 920 aa14□□□□□ -0.17
CCDC40-205ENST00000571028 CHFRQ96EP1 664 aa14□□□□□ -0.17
CCDC40-205ENST00000571028 C8orf48Q96LL4 319 aa14□□□□□ -0.17
CCDC40-205ENST00000571028 ZSWIM1Q9BR11 485 aa14□□□□□ -0.17
CCDC40-205ENST00000571028 DUSP16Q9BY84 665 aa14□□□□□ -0.17
CCDC40-205ENST00000571028 PDCL3Q9H2J4 239 aa14□□□□□ -0.17
CCDC40-205ENST00000571028 KIAA1257Q9ULG3 409 aa14□□□□□ -0.17
CCDC40-205ENST00000571028 CNTN6Q9UQ52 1028 aa14□□□□□ -0.17
CCDC40-205ENST00000571028 A0A1W2PQC6 194 aa13.99□□□□□ -0.17
CCDC40-205ENST00000571028 F8VZ95 297 aa13.99□□□□□ -0.17
CCDC40-205ENST00000571028 O00370 1275 aa13.99□□□□□ -0.17
CCDC40-205ENST00000571028 AP5Z1O43299 807 aa13.99□□□□□ -0.17
CCDC40-205ENST00000571028 MED7O43513 233 aa13.99□□□□□ -0.17
CCDC40-205ENST00000571028 ABL1P00519 1130 aa13.99□□□□□ -0.17
CCDC40-205ENST00000571028 ARSAP15289 507 aa13.99□□□□□ -0.17
CCDC40-205ENST00000571028 DDX6P26196 483 aaKnown RBP eCLIP13.99□□□□□ -0.17
CCDC40-205ENST00000571028 CLCN1P35523 988 aa13.99□□□□□ -0.17
CCDC40-205ENST00000571028 SOX5P35711 763 aa13.99□□□□□ -0.17
CCDC40-205ENST00000571028 SLC8A3P57103 927 aa13.99□□□□□ -0.17
CCDC40-205ENST00000571028 PDE4CQ08493 712 aa13.99□□□□□ -0.17
CCDC40-205ENST00000571028 CNGA2Q16280 664 aa13.99□□□□□ -0.17
CCDC40-205ENST00000571028 ANO7Q6IWH7 933 aa13.99□□□□□ -0.17
CCDC40-205ENST00000571028 DENND1BQ6P3S1 775 aa13.99□□□□□ -0.17
CCDC40-205ENST00000571028 CLEC20AQ6ZU45 233 aa13.99□□□□□ -0.17
CCDC40-205ENST00000571028 DENND5BQ6ZUT9 1274 aa13.99□□□□□ -0.17
CCDC40-205ENST00000571028 PASD1Q8IV76 773 aa13.99□□□□□ -0.17
CCDC40-205ENST00000571028 FAM71AQ8IYT1 594 aa13.99□□□□□ -0.17
CCDC40-205ENST00000571028 HDDC3Q8N4P3 179 aa13.99□□□□□ -0.17
CCDC40-205ENST00000571028 MAB21L3Q8N8X9 362 aa13.99□□□□□ -0.17
CCDC40-205ENST00000571028 CD101Q93033 1021 aa13.99□□□□□ -0.17
CCDC40-205ENST00000571028 SPACA7Q96KW9 195 aa13.99□□□□□ -0.17
CCDC40-205ENST00000571028 SLC46A2Q9BY10 475 aa13.99□□□□□ -0.17
CCDC40-205ENST00000571028 TDP1Q9NUW8 608 aa13.99□□□□□ -0.17
CCDC40-205ENST00000571028 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.99□□□□□ -0.17
CCDC40-205ENST00000571028 SPAARA0A1B0GVQ0 90 aa13.98□□□□□ -0.17
CCDC40-205ENST00000571028 OTOL1A6NHN0 477 aaPredicted RBP13.98□□□□□ -0.17
CCDC40-205ENST00000571028 TULP2O00295 520 aa13.98□□□□□ -0.17
CCDC40-205ENST00000571028 PIK3R2O00459 728 aa13.98□□□□□ -0.17
CCDC40-205ENST00000571028 MAP3K13O43283 966 aa13.98□□□□□ -0.17
CCDC40-205ENST00000571028 RGS7P49802 495 aa13.98□□□□□ -0.17
CCDC40-205ENST00000571028 SLC5A3P53794 718 aa13.98□□□□□ -0.17
CCDC40-205ENST00000571028 BCAT1P54687 386 aa13.98□□□□□ -0.17
CCDC40-205ENST00000571028 USP46P62068 366 aa13.98□□□□□ -0.17
CCDC40-205ENST00000571028 BST2Q10589 180 aaKnown RBP13.98□□□□□ -0.17
CCDC40-205ENST00000571028 C19orf48Q6RUI8 117 aa13.98□□□□□ -0.17
CCDC40-205ENST00000571028 LCLAT1Q6UWP7 414 aa13.98□□□□□ -0.17
CCDC40-205ENST00000571028 GPRIN1Q7Z2K8 1008 aa13.98□□□□□ -0.17
CCDC40-205ENST00000571028 PROSER1Q86XN7 944 aa13.98□□□□□ -0.17
CCDC40-205ENST00000571028 NUP93Q8N1F7 819 aa13.98□□□□□ -0.17
CCDC40-205ENST00000571028 ANKRD52Q8NB46 1076 aa13.98□□□□□ -0.17
CCDC40-205ENST00000571028 SCAMP5Q8TAC9 235 aa13.98□□□□□ -0.17
CCDC40-205ENST00000571028 ZNF606Q8WXB4 792 aa13.98□□□□□ -0.17
CCDC40-205ENST00000571028 MRPS31Q92665 395 aaKnown RBP13.98□□□□□ -0.17
CCDC40-205ENST00000571028 SPATA17Q96L03 361 aa13.98□□□□□ -0.17
CCDC40-205ENST00000571028 FBRSL1Q9HCM7 1045 aaKnown RBP13.98□□□□□ -0.17
CCDC40-205ENST00000571028 EVLQ9UI08 416 aaPredicted RBP13.98□□□□□ -0.17
CCDC40-205ENST00000571028 CCL26Q9Y258 94 aa13.98□□□□□ -0.17
CCDC40-205ENST00000571028 SPAG17Q6Q759 2223 aa13.98□□□□□ -0.17
CCDC40-205ENST00000571028 ALDH1A2O94788 518 aa13.97□□□□□ -0.17
CCDC40-205ENST00000571028 HMGA1P17096 107 aaKnown RBP13.97□□□□□ -0.17
CCDC40-205ENST00000571028 YWHAQP27348 245 aa13.97□□□□□ -0.17
CCDC40-205ENST00000571028 GJA4P35212 333 aa13.97□□□□□ -0.17
CCDC40-205ENST00000571028 KRT9P35527 623 aa13.97□□□□□ -0.17
CCDC40-205ENST00000571028 IFNAR2P48551 515 aa13.97□□□□□ -0.17
CCDC40-205ENST00000571028 PDE6CP51160 858 aa13.97□□□□□ -0.17
CCDC40-205ENST00000571028 JAM2P57087 298 aa13.97□□□□□ -0.17
CCDC40-205ENST00000571028 BPIFB4P59827 614 aa13.97□□□□□ -0.17
CCDC40-205ENST00000571028 NR1H3Q13133 447 aa13.97□□□□□ -0.17
CCDC40-205ENST00000571028 ARMCX6Q7L4S7 300 aa13.97□□□□□ -0.17
CCDC40-205ENST00000571028 LPCAT2Q7L5N7 544 aa13.97□□□□□ -0.17
CCDC40-205ENST00000571028 PDZD3Q86UT5 571 aa13.97□□□□□ -0.17
CCDC40-205ENST00000571028 PIGZQ86VD9 579 aa13.97□□□□□ -0.17
CCDC40-205ENST00000571028 SLC20A1Q8WUM9 679 aa13.97□□□□□ -0.17
CCDC40-205ENST00000571028 USP13Q92995 863 aaPredicted RBP13.97□□□□□ -0.17
CCDC40-205ENST00000571028 ATP2A3Q93084 1043 aa13.97□□□□□ -0.17
CCDC40-205ENST00000571028 FBXO32Q969P5 355 aa13.97□□□□□ -0.17
CCDC40-205ENST00000571028 IL21Q9HBE4 155 aa13.97□□□□□ -0.17
CCDC40-205ENST00000571028 CSNK1G1Q9HCP0 422 aa13.97□□□□□ -0.17
CCDC40-205ENST00000571028 ST7Q9NRC1 585 aa13.97□□□□□ -0.17
CCDC40-205ENST00000571028 SEPT11Q9NVA2 429 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms