RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 HASPINQ8TF76 798 aa4.85□□□□□ -1.63
NUP88-202ENST00000570937 REPS1Q96D71 796 aa4.85□□□□□ -1.63
NUP88-202ENST00000570937 PPP1R9BQ96SB3 815 aa4.85□□□□□ -1.63
NUP88-202ENST00000570937 FSD1LQ9BXM9 530 aa4.85□□□□□ -1.63
NUP88-202ENST00000570937 TRIM5Q9C035 493 aa4.85□□□□□ -1.63
NUP88-202ENST00000570937 BTBD1Q9H0C5 482 aa4.85□□□□□ -1.63
NUP88-202ENST00000570937 DHX36Q9H2U1 1008 aaKnown RBP4.85□□□□□ -1.63
NUP88-202ENST00000570937 SACM1LQ9NTJ5 587 aa4.85□□□□□ -1.63
NUP88-202ENST00000570937 TMOD3Q9NYL9 352 aa4.85□□□□□ -1.63
NUP88-202ENST00000570937 COL20A1Q9P218 1284 aa4.85□□□□□ -1.63
NUP88-202ENST00000570937 PADI4Q9UM07 663 aa4.85□□□□□ -1.63
NUP88-202ENST00000570937 CDY1Q9Y6F8 540 aa4.85□□□□□ -1.63
NUP88-202ENST00000570937 MEGF6O75095 1541 aa4.85□□□□□ -1.63
NUP88-202ENST00000570937 PEAK1Q9H792 1746 aa4.84□□□□□ -1.63
NUP88-202ENST00000570937 NCAPD2Q15021 1401 aa4.84□□□□□ -1.63
NUP88-202ENST00000570937 KDRP35968 1356 aa4.84□□□□□ -1.63
NUP88-202ENST00000570937 LOC102723971A0A1B0GUV8 181 aa4.84□□□□□ -1.63
NUP88-202ENST00000570937 TARM1B6A8C7 271 aa4.84□□□□□ -1.63
NUP88-202ENST00000570937 JTBO76095 146 aa4.84□□□□□ -1.63
NUP88-202ENST00000570937 HNRNPCP07910 306 aaKnown RBP eCLIP4.84□□□□□ -1.63
NUP88-202ENST00000570937 HMOX1P09601 288 aa4.84□□□□□ -1.63
NUP88-202ENST00000570937 MRPS21P82921 87 aaKnown RBP4.84□□□□□ -1.63
NUP88-202ENST00000570937 CERCAMQ5T4B2 595 aa4.84□□□□□ -1.63
NUP88-202ENST00000570937 DEPDC1Q5TB30 811 aa4.84□□□□□ -1.63
NUP88-202ENST00000570937 SUMO4Q6EEV6 95 aa4.84□□□□□ -1.63
NUP88-202ENST00000570937 DGKHQ86XP1 1220 aa4.84□□□□□ -1.63
NUP88-202ENST00000570937 WDR75Q8IWA0 830 aaKnown RBP4.84□□□□□ -1.63
NUP88-202ENST00000570937 IZUMO1Q8IYV9 350 aa4.84□□□□□ -1.63
NUP88-202ENST00000570937 PPP2R3CQ969Q6 453 aa4.84□□□□□ -1.63
NUP88-202ENST00000570937 R3HDM4Q96D70 268 aa4.84□□□□□ -1.63
NUP88-202ENST00000570937 DDX21Q9NR30 783 aaKnown RBP eCLIP4.84□□□□□ -1.63
NUP88-202ENST00000570937 ADARB2Q9NS39 739 aaKnown RBP4.84□□□□□ -1.63
NUP88-202ENST00000570937 DNMT3BQ9UBC3 853 aaKnown RBP4.84□□□□□ -1.63
NUP88-202ENST00000570937 SERGEFQ9UGK8 458 aa4.84□□□□□ -1.63
NUP88-202ENST00000570937 CCNL1Q9UK58 526 aaPredicted RBP4.84□□□□□ -1.63
NUP88-202ENST00000570937 OGDHLQ9ULD0 1010 aa4.84□□□□□ -1.63
NUP88-202ENST00000570937 SNX14Q9Y5W7 946 aa4.84□□□□□ -1.63
NUP88-202ENST00000570937 WNK3Q9BYP7 1800 aa4.83□□□□□ -1.64
NUP88-202ENST00000570937 QSOX1O00391 747 aa4.83□□□□□ -1.64
NUP88-202ENST00000570937 PARNO95453 639 aaKnown RBP4.83□□□□□ -1.64
NUP88-202ENST00000570937 PRKCBP05771 671 aa4.83□□□□□ -1.64
NUP88-202ENST00000570937 DLDP09622 509 aaKnown RBP4.83□□□□□ -1.64
NUP88-202ENST00000570937 ZKSCAN1P17029 563 aaPredicted RBP4.83□□□□□ -1.64
NUP88-202ENST00000570937 ZNF37AP17032 561 aaPredicted RBP4.83□□□□□ -1.64
NUP88-202ENST00000570937 PRKAG1P54619 331 aa4.83□□□□□ -1.64
NUP88-202ENST00000570937 BCAT1P54687 386 aa4.83□□□□□ -1.64
NUP88-202ENST00000570937 TPTEP56180 551 aa4.83□□□□□ -1.64
NUP88-202ENST00000570937 RPS16P62249 146 aaKnown RBP4.83□□□□□ -1.64
NUP88-202ENST00000570937 TFF2Q03403 129 aa4.83□□□□□ -1.64
NUP88-202ENST00000570937 CCNIQ14094 377 aa4.83□□□□□ -1.64
NUP88-202ENST00000570937 NPY5RQ15761 445 aa4.83□□□□□ -1.64
NUP88-202ENST00000570937 SLC15A2Q16348 729 aa4.83□□□□□ -1.64
NUP88-202ENST00000570937 PTCHD3Q3KNS1 767 aa4.83□□□□□ -1.64
NUP88-202ENST00000570937 TBC1D25Q3MII6 688 aa4.83□□□□□ -1.64
NUP88-202ENST00000570937 C3orf38Q5JPI3 329 aa4.83□□□□□ -1.64
NUP88-202ENST00000570937 Q6ZWC4 215 aa4.83□□□□□ -1.64
NUP88-202ENST00000570937 SLC29A4Q7RTT9 530 aa4.83□□□□□ -1.64
NUP88-202ENST00000570937 KRT78Q8N1N4 520 aa4.83□□□□□ -1.64
NUP88-202ENST00000570937 LRRC71Q8N4P6 559 aa4.83□□□□□ -1.64
NUP88-202ENST00000570937 SEMA6DQ8NFY4 1073 aa4.83□□□□□ -1.64
NUP88-202ENST00000570937 TTC17Q96AE7 1141 aa4.83□□□□□ -1.64
NUP88-202ENST00000570937 THAP7Q9BT49 309 aaPredicted RBP4.83□□□□□ -1.64
NUP88-202ENST00000570937 ZNF287Q9HBT7 754 aa4.83□□□□□ -1.64
NUP88-202ENST00000570937 GBA2Q9HCG7 927 aaPredicted RBP4.83□□□□□ -1.64
NUP88-202ENST00000570937 TFCP2L1Q9NZI6 479 aa4.83□□□□□ -1.64
NUP88-202ENST00000570937 ADAMTS5Q9UNA0 930 aa4.83□□□□□ -1.64
NUP88-202ENST00000570937 FRMD4BQ9Y2L6 1034 aa4.83□□□□□ -1.64
NUP88-202ENST00000570937 MAPK8IP3Q9UPT6 1336 aa4.82□□□□□ -1.64
NUP88-202ENST00000570937 LINC01548A6NM66 108 aa4.82□□□□□ -1.64
NUP88-202ENST00000570937 MAP4K4O95819 1239 aaPredicted RBP4.82□□□□□ -1.64
NUP88-202ENST00000570937 PRKCGP05129 697 aa4.82□□□□□ -1.64
NUP88-202ENST00000570937 NPSP0C0P6 89 aa4.82□□□□□ -1.64
NUP88-202ENST00000570937 TXNP10599 105 aaKnown RBP4.82□□□□□ -1.64
NUP88-202ENST00000570937 IL1R1P14778 569 aa4.82□□□□□ -1.64
NUP88-202ENST00000570937 ENGP17813 658 aa4.82□□□□□ -1.64
NUP88-202ENST00000570937 CTGFP29279 349 aa4.82□□□□□ -1.64
NUP88-202ENST00000570937 PRKAR2BP31323 418 aa4.82□□□□□ -1.64
NUP88-202ENST00000570937 PDE1AP54750 535 aa4.82□□□□□ -1.64
NUP88-202ENST00000570937 FOXF2Q12947 444 aa4.82□□□□□ -1.64
NUP88-202ENST00000570937 CYP1B1Q16678 543 aa4.82□□□□□ -1.64
NUP88-202ENST00000570937 LY6KQ17RY6 165 aa4.82□□□□□ -1.64
NUP88-202ENST00000570937 MTHFSDQ2M296 383 aaKnown RBP4.82□□□□□ -1.64
NUP88-202ENST00000570937 PCID2Q5JVF3 399 aa4.82□□□□□ -1.64
NUP88-202ENST00000570937 SLC9A4Q6AI14 798 aa4.82□□□□□ -1.64
NUP88-202ENST00000570937 CAND1Q86VP6 1230 aaKnown RBP4.82□□□□□ -1.64
NUP88-202ENST00000570937 SPARTQ8N0X7 666 aa4.82□□□□□ -1.64
NUP88-202ENST00000570937 XAGE5Q8WWM1 108 aa4.82□□□□□ -1.64
NUP88-202ENST00000570937 PIGBQ92521 554 aa4.82□□□□□ -1.64
NUP88-202ENST00000570937 C8orf48Q96LL4 319 aa4.82□□□□□ -1.64
NUP88-202ENST00000570937 C17orf80Q9BSJ5 609 aa4.82□□□□□ -1.64
NUP88-202ENST00000570937 NUP62CLQ9H1M0 184 aa4.82□□□□□ -1.64
NUP88-202ENST00000570937 RGPD2P0DJD1 1756 aa4.81□□□□□ -1.64
NUP88-202ENST00000570937 PALLDQ8WX93 1383 aa4.81□□□□□ -1.64
NUP88-202ENST00000570937 TNS1Q9HBL0 1735 aaKnown RBP4.81□□□□□ -1.64
NUP88-202ENST00000570937 NHSQ6T4R5 1651 aa4.81□□□□□ -1.64
NUP88-202ENST00000570937 CGB1A6NKQ9 187 aa4.81□□□□□ -1.64
NUP88-202ENST00000570937 M0R3H8 397 aa4.81□□□□□ -1.64
NUP88-202ENST00000570937 FOXN3O00409 490 aaPredicted RBP4.81□□□□□ -1.64
NUP88-202ENST00000570937 CD3EAPO15446 510 aaKnown RBP4.81□□□□□ -1.64
NUP88-202ENST00000570937 ANP32CO43423 234 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms