RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 IL17RCQ8NAC3 791 aa12.98□□□□□ -0.33
CTDNEP1-205ENST00000570828 NETO1Q8TDF5 533 aa12.98□□□□□ -0.33
CTDNEP1-205ENST00000570828 ZC3H10Q96K80 434 aaKnown RBP12.98□□□□□ -0.33
CTDNEP1-205ENST00000570828 CNOT6LQ96LI5 555 aaKnown RBP12.98□□□□□ -0.33
CTDNEP1-205ENST00000570828 NT5C1BQ96P26 610 aa12.98□□□□□ -0.33
CTDNEP1-205ENST00000570828 XPO6Q96QU8 1125 aaKnown RBP12.98□□□□□ -0.33
CTDNEP1-205ENST00000570828 TPSD1Q9BZJ3 242 aa12.98□□□□□ -0.33
CTDNEP1-205ENST00000570828 UBXN6Q9BZV1 441 aa12.98□□□□□ -0.33
CTDNEP1-205ENST00000570828 ARRDC1-AS1Q9H2J1 176 aa12.98□□□□□ -0.33
CTDNEP1-205ENST00000570828 LRRC4Q9HBW1 653 aa12.98□□□□□ -0.33
CTDNEP1-205ENST00000570828 POLMQ9NP87 494 aaPredicted RBP12.98□□□□□ -0.33
CTDNEP1-205ENST00000570828 DNAJC17Q9NVM6 304 aaKnown RBP12.98□□□□□ -0.33
CTDNEP1-205ENST00000570828 WDR35Q9P2L0 1181 aa12.98□□□□□ -0.33
CTDNEP1-205ENST00000570828 RASAL2Q9UJF2 1139 aa12.98□□□□□ -0.33
CTDNEP1-205ENST00000570828 STRIP2Q9ULQ0 834 aa12.98□□□□□ -0.33
CTDNEP1-205ENST00000570828 PCDHGA5Q9Y5G8 931 aa12.98□□□□□ -0.33
CTDNEP1-205ENST00000570828 NCOR2Q9Y618 2525 aa12.97□□□□□ -0.33
CTDNEP1-205ENST00000570828 A0A0A0MRY4 1105 aa12.97□□□□□ -0.33
CTDNEP1-205ENST00000570828 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.97□□□□□ -0.33
CTDNEP1-205ENST00000570828 ANTXRLA6NF34 631 aa12.97□□□□□ -0.33
CTDNEP1-205ENST00000570828 SGK1O00141 431 aa12.97□□□□□ -0.33
CTDNEP1-205ENST00000570828 XPO1O14980 1071 aaKnown RBP12.97□□□□□ -0.33
CTDNEP1-205ENST00000570828 DCLK1O15075 740 aa12.97□□□□□ -0.33
CTDNEP1-205ENST00000570828 CACNG3O60359 315 aa12.97□□□□□ -0.33
CTDNEP1-205ENST00000570828 STC2O76061 302 aa12.97□□□□□ -0.33
CTDNEP1-205ENST00000570828 RHOBTB1O94844 696 aa12.97□□□□□ -0.33
CTDNEP1-205ENST00000570828 GNA14O95837 355 aa12.97□□□□□ -0.33
CTDNEP1-205ENST00000570828 ZBED1O96006 694 aa12.97□□□□□ -0.33
CTDNEP1-205ENST00000570828 SETSIPP0DME0 302 aa12.97□□□□□ -0.33
CTDNEP1-205ENST00000570828 TYRP14679 529 aa12.97□□□□□ -0.33
CTDNEP1-205ENST00000570828 BMP6P22004 513 aa12.97□□□□□ -0.33
CTDNEP1-205ENST00000570828 KIR2DL1P43626 348 aaPredicted RBP12.97□□□□□ -0.33
CTDNEP1-205ENST00000570828 ATXN1P54253 815 aaKnown RBP12.97□□□□□ -0.33
CTDNEP1-205ENST00000570828 YWHAGP61981 247 aaKnown RBP eCLIP12.97□□□□□ -0.33
CTDNEP1-205ENST00000570828 COG7P83436 770 aa12.97□□□□□ -0.33
CTDNEP1-205ENST00000570828 PDE4CQ08493 712 aa12.97□□□□□ -0.33
CTDNEP1-205ENST00000570828 PLK5Q496M5 336 aa12.97□□□□□ -0.33
CTDNEP1-205ENST00000570828 AASDHQ4L235 1098 aaPredicted RBP12.97□□□□□ -0.33
CTDNEP1-205ENST00000570828 RAB41Q5JT25 222 aa12.97□□□□□ -0.33
CTDNEP1-205ENST00000570828 TMEM270Q6UE05 265 aa12.97□□□□□ -0.33
CTDNEP1-205ENST00000570828 TPGS1Q6ZTW0 290 aa12.97□□□□□ -0.33
CTDNEP1-205ENST00000570828 PACS2Q86VP3 889 aa12.97□□□□□ -0.33
CTDNEP1-205ENST00000570828 PPM1KQ8N3J5 372 aa12.97□□□□□ -0.33
CTDNEP1-205ENST00000570828 ZNF513Q8N8E2 541 aaPredicted RBP12.97□□□□□ -0.33
CTDNEP1-205ENST00000570828 C12orf50Q8NA57 414 aaPredicted RBP12.97□□□□□ -0.33
CTDNEP1-205ENST00000570828 MDGA1Q8NFP4 955 aa12.97□□□□□ -0.33
CTDNEP1-205ENST00000570828 BHMTQ93088 406 aa12.97□□□□□ -0.33
CTDNEP1-205ENST00000570828 IPO9Q96P70 1041 aaKnown RBP12.97□□□□□ -0.33
CTDNEP1-205ENST00000570828 RTKNQ9BST9 563 aa12.97□□□□□ -0.33
CTDNEP1-205ENST00000570828 ULBP1Q9BZM6 244 aa12.97□□□□□ -0.33
CTDNEP1-205ENST00000570828 ZDHHC4Q9NPG8 344 aa12.97□□□□□ -0.33
CTDNEP1-205ENST00000570828 MARK1Q9P0L2 795 aa12.97□□□□□ -0.33
CTDNEP1-205ENST00000570828 BCCIPQ9P287 314 aaKnown RBP eCLIP12.97□□□□□ -0.33
CTDNEP1-205ENST00000570828 KIAA1257Q9ULG3 409 aa12.97□□□□□ -0.33
CTDNEP1-205ENST00000570828 ZNF510Q9Y2H8 683 aa12.97□□□□□ -0.33
CTDNEP1-205ENST00000570828 TULP2O00295 520 aa12.96□□□□□ -0.33
CTDNEP1-205ENST00000570828 O00370 1275 aa12.96□□□□□ -0.33
CTDNEP1-205ENST00000570828 PMM2O15305 246 aa12.96□□□□□ -0.33
CTDNEP1-205ENST00000570828 P4HA2O15460 535 aa12.96□□□□□ -0.33
CTDNEP1-205ENST00000570828 HMBSP08397 361 aa12.96□□□□□ -0.33
CTDNEP1-205ENST00000570828 PAEPP09466 180 aa12.96□□□□□ -0.33
CTDNEP1-205ENST00000570828 VDRP11473 427 aa12.96□□□□□ -0.33
CTDNEP1-205ENST00000570828 MPLP40238 635 aa12.96□□□□□ -0.33
CTDNEP1-205ENST00000570828 STX17P56962 302 aa12.96□□□□□ -0.33
CTDNEP1-205ENST00000570828 ADIGQ0VDE8 80 aa12.96□□□□□ -0.33
CTDNEP1-205ENST00000570828 CCDC6Q16204 474 aa12.96□□□□□ -0.33
CTDNEP1-205ENST00000570828 EMC10Q5UCC4 262 aa12.96□□□□□ -0.33
CTDNEP1-205ENST00000570828 SIX6OS1Q8N1H7 587 aa12.96□□□□□ -0.33
CTDNEP1-205ENST00000570828 UBR7Q8N806 425 aa12.96□□□□□ -0.33
CTDNEP1-205ENST00000570828 SPACA7Q96KW9 195 aa12.96□□□□□ -0.33
CTDNEP1-205ENST00000570828 DCLK3Q9C098 648 aa12.96□□□□□ -0.33
CTDNEP1-205ENST00000570828 DUSP15Q9H1R2 295 aaPredicted RBP12.96□□□□□ -0.33
CTDNEP1-205ENST00000570828 MARCH2Q9P0N8 246 aa12.96□□□□□ -0.33
CTDNEP1-205ENST00000570828 INVSQ9Y283 1065 aa12.96□□□□□ -0.33
CTDNEP1-205ENST00000570828 PCDHB4Q9Y5E5 795 aa12.96□□□□□ -0.33
CTDNEP1-205ENST00000570828 TCRBV21S2A2A0A5A6 115 aa12.95□□□□□ -0.34
CTDNEP1-205ENST00000570828 MED19A0JLT2 244 aaPredicted RBP12.95□□□□□ -0.34
CTDNEP1-205ENST00000570828 TRIM24O15164 1050 aa12.95□□□□□ -0.34
CTDNEP1-205ENST00000570828 ADAM23O75077 832 aa12.95□□□□□ -0.34
CTDNEP1-205ENST00000570828 FGFR1OPO95684 399 aaKnown RBP12.95□□□□□ -0.34
CTDNEP1-205ENST00000570828 ZNF806P0C7X5 589 aa12.95□□□□□ -0.34
CTDNEP1-205ENST00000570828 HNRNPLP14866 589 aaKnown RBP eCLIP12.95□□□□□ -0.34
CTDNEP1-205ENST00000570828 CORO1AP31146 461 aaKnown RBP12.95□□□□□ -0.34
CTDNEP1-205ENST00000570828 CHKAP35790 457 aa12.95□□□□□ -0.34
CTDNEP1-205ENST00000570828 DGKGP49619 791 aa12.95□□□□□ -0.34
CTDNEP1-205ENST00000570828 UBE2HP62256 183 aa12.95□□□□□ -0.34
CTDNEP1-205ENST00000570828 PGBD3Q8N328 593 aa12.95□□□□□ -0.34
CTDNEP1-205ENST00000570828 TRIML1Q8N9V2 468 aa12.95□□□□□ -0.34
CTDNEP1-205ENST00000570828 UBA3Q8TBC4 463 aa12.95□□□□□ -0.34
CTDNEP1-205ENST00000570828 RNF139Q8WU17 664 aa12.95□□□□□ -0.34
CTDNEP1-205ENST00000570828 HMGB4Q8WW32 186 aa12.95□□□□□ -0.34
CTDNEP1-205ENST00000570828 VPS45Q9NRW7 570 aa12.95□□□□□ -0.34
CTDNEP1-205ENST00000570828 OLA1Q9NTK5 396 aaKnown RBP12.95□□□□□ -0.34
CTDNEP1-205ENST00000570828 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.95□□□□□ -0.34
CTDNEP1-205ENST00000570828 MYO16Q9Y6X6 1858 aa12.95□□□□□ -0.34
CTDNEP1-205ENST00000570828 SLC12A8A0AV02 714 aa12.94□□□□□ -0.34
CTDNEP1-205ENST00000570828 M0QYV0 167 aa12.94□□□□□ -0.34
CTDNEP1-205ENST00000570828 SLC30A4O14863 429 aa12.94□□□□□ -0.34
CTDNEP1-205ENST00000570828 ZBTB24O43167 697 aaPredicted RBP12.94□□□□□ -0.34
CTDNEP1-205ENST00000570828 GDF9O60383 454 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms