RNA–Protein interactions for RNA: ENST00000570546.5

CIITA-204, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 5,342 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-204ENST00000570546 INSRRP14616 1297 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 PTK2BQ14289 1009 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 SPANXN3Q5MJ09 141 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 TDRD10Q5VZ19 366 aaKnown RBP15.79■□□□□ 0.12
CIITA-204ENST00000570546 SCUBE3Q8IX30 993 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 TNIP2Q8NFZ5 429 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 GANCQ8TET4 914 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 ALG3Q92685 438 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 AKT1S1Q96B36 256 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 ASB7Q9H672 318 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 FSCN2O14926 492 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 RBL1P28749 1068 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 SLC45A4Q5BKX6 768 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 SNX31Q8N9S9 440 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 AGAP11Q8TF27 550 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 L3MBTL3Q96JM7 780 aaPredicted RBP15.79■□□□□ 0.12
CIITA-204ENST00000570546 CPNE1Q99829 537 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 CINPQ9BW66 212 aaPredicted RBP15.79■□□□□ 0.12
CIITA-204ENST00000570546 MRIQ9BWK5 157 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 APOL5Q9BWW9 433 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 TTYH3Q9C0H2 523 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 TMEM134Q9H6X4 195 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 NCKIPSDQ9NZQ3 722 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 CAMTA1Q9Y6Y1 1673 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 UNC5CO95185 931 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 ALBP02768 609 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 SLC6A3Q01959 620 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 SLC20A2Q08357 652 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 ATP13A4Q4VNC1 1196 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 THEMIS2Q5TEJ8 643 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 KYQ8NBH2 561 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 STKLD1Q8NE28 680 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 HIC2Q96JB3 615 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 LRCH1Q9Y2L9 728 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 SIGLEC16A6NMB1 481 aa15.78■□□□□ 0.12
CIITA-204ENST00000570546 WNT10BO00744 389 aa15.78■□□□□ 0.12
CIITA-204ENST00000570546 PRPF4O43172 522 aaKnown RBP eCLIP15.78■□□□□ 0.12
CIITA-204ENST00000570546 SLURP2P0DP57 97 aa15.78■□□□□ 0.12
CIITA-204ENST00000570546 NCKAP1LP55160 1127 aa15.78■□□□□ 0.12
CIITA-204ENST00000570546 CSHL1Q14406 222 aa15.78■□□□□ 0.12
CIITA-204ENST00000570546 ZCCHC23Q6ZST2 131 aa15.78■□□□□ 0.12
CIITA-204ENST00000570546 TRAPPC12Q8WVT3 735 aa15.78■□□□□ 0.12
CIITA-204ENST00000570546 USP13Q92995 863 aaPredicted RBP15.78■□□□□ 0.12
CIITA-204ENST00000570546 ZNF333Q96JL9 665 aa15.78■□□□□ 0.12
CIITA-204ENST00000570546 TEX12Q9BXU0 123 aa15.78■□□□□ 0.12
CIITA-204ENST00000570546 ZNF229Q9UJW7 825 aa15.78■□□□□ 0.12
CIITA-204ENST00000570546 ATP5BP06576 529 aaKnown RBP15.78■□□□□ 0.12
CIITA-204ENST00000570546 NME5P56597 212 aa15.78■□□□□ 0.12
CIITA-204ENST00000570546 ADRM1Q16186 407 aa15.78■□□□□ 0.12
CIITA-204ENST00000570546 PREPLQ4J6C6 727 aaPredicted RBP15.78■□□□□ 0.12
CIITA-204ENST00000570546 SGO1Q5FBB7 561 aa15.78■□□□□ 0.12
CIITA-204ENST00000570546 PWWP2AQ96N64 755 aa15.78■□□□□ 0.12
CIITA-204ENST00000570546 CATSPER2Q96P56 530 aa15.78■□□□□ 0.12
CIITA-204ENST00000570546 WDR70Q9NW82 654 aa15.78■□□□□ 0.12
CIITA-204ENST00000570546 FARP1Q9Y4F1 1045 aaPredicted RBP15.78■□□□□ 0.12
CIITA-204ENST00000570546 BCL9LQ86UU0 1499 aa15.78■□□□□ 0.12
CIITA-204ENST00000570546 E5RJQ4 531 aa15.78■□□□□ 0.12
CIITA-204ENST00000570546 OPLAHO14841 1288 aa15.78■□□□□ 0.12
CIITA-204ENST00000570546 DEAF1O75398 565 aaPredicted RBP15.78■□□□□ 0.12
CIITA-204ENST00000570546 RBP1P09455 135 aa15.78■□□□□ 0.12
CIITA-204ENST00000570546 KCNJ2P63252 427 aa15.78■□□□□ 0.12
CIITA-204ENST00000570546 GDPD5Q8WTR4 605 aa15.78■□□□□ 0.12
CIITA-204ENST00000570546 GPR63Q9BZJ6 419 aa15.78■□□□□ 0.12
CIITA-204ENST00000570546 MMADHCQ9H3L0 296 aaPredicted RBP15.78■□□□□ 0.12
CIITA-204ENST00000570546 ERVK-5Q9HDB9 667 aa15.78■□□□□ 0.12
CIITA-204ENST00000570546 ETNK2Q9NVF9 386 aa15.78■□□□□ 0.12
CIITA-204ENST00000570546 KCNK4Q9NYG8 393 aa15.78■□□□□ 0.12
CIITA-204ENST00000570546 TRMT6Q9UJA5 497 aaKnown RBP15.78■□□□□ 0.12
CIITA-204ENST00000570546 VPS9D1Q9Y2B5 631 aa15.78■□□□□ 0.12
CIITA-204ENST00000570546 FMN2Q9NZ56 1722 aa15.78■□□□□ 0.12
CIITA-204ENST00000570546 CHADO15335 359 aa15.78■□□□□ 0.12
CIITA-204ENST00000570546 DAB2P98082 770 aa15.78■□□□□ 0.12
CIITA-204ENST00000570546 TCHHL1Q5QJ38 904 aaPredicted RBP15.78■□□□□ 0.12
CIITA-204ENST00000570546 PHF13Q86YI8 300 aaPredicted RBP15.78■□□□□ 0.12
CIITA-204ENST00000570546 REPS2Q8NFH8 660 aa15.78■□□□□ 0.12
CIITA-204ENST00000570546 RBBP8Q99708 897 aa15.78■□□□□ 0.12
CIITA-204ENST00000570546 MOSPD1Q9UJG1 213 aa15.78■□□□□ 0.12
CIITA-204ENST00000570546 PCDHAC2Q9Y5I4 1007 aa15.78■□□□□ 0.12
CIITA-204ENST00000570546 ADGRA3Q8IWK6 1321 aa15.78■□□□□ 0.12
CIITA-204ENST00000570546 PCYT1AP49585 367 aa15.77■□□□□ 0.12
CIITA-204ENST00000570546 HARS2P49590 506 aaKnown RBP15.77■□□□□ 0.12
CIITA-204ENST00000570546 QPCTQ16769 361 aa15.77■□□□□ 0.12
CIITA-204ENST00000570546 SYTL3Q4VX76 610 aa15.77■□□□□ 0.12
CIITA-204ENST00000570546 NPNTQ6UXI9 565 aa15.77■□□□□ 0.12
CIITA-204ENST00000570546 ERO1BQ86YB8 467 aa15.77■□□□□ 0.12
CIITA-204ENST00000570546 HACD1B0YJ81 288 aa15.77■□□□□ 0.12
CIITA-204ENST00000570546 RNF103O00237 685 aa15.77■□□□□ 0.12
CIITA-204ENST00000570546 FKBP9O95302 570 aa15.77■□□□□ 0.12
CIITA-204ENST00000570546 GLRA2P23416 452 aa15.77■□□□□ 0.12
CIITA-204ENST00000570546 AKT1P31749 480 aa15.77■□□□□ 0.12
CIITA-204ENST00000570546 MMP13P45452 471 aa15.77■□□□□ 0.12
CIITA-204ENST00000570546 TGFB2P61812 414 aa15.77■□□□□ 0.12
CIITA-204ENST00000570546 ADIGQ0VDE8 80 aa15.77■□□□□ 0.12
CIITA-204ENST00000570546 FKBP9P1Q75LS8 142 aa15.77■□□□□ 0.12
CIITA-204ENST00000570546 KCNMB4Q86W47 210 aa15.77■□□□□ 0.12
CIITA-204ENST00000570546 PLD3Q8IV08 490 aa15.77■□□□□ 0.12
CIITA-204ENST00000570546 POU5F2Q8N7G0 328 aa15.77■□□□□ 0.12
CIITA-204ENST00000570546 SH3KBP1Q96B97 665 aa15.77■□□□□ 0.12
CIITA-204ENST00000570546 ZBED2Q9BTP6 218 aa15.77■□□□□ 0.12
CIITA-204ENST00000570546 ATXN2Q99700 1313 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms