RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 GEN1Q17RS7 908 aa11.04□□□□□ -0.64
CTDNEP1-202ENST00000570380 TBC1D25Q3MII6 688 aa11.04□□□□□ -0.64
CTDNEP1-202ENST00000570380 PKDCCQ504Y2 493 aa11.04□□□□□ -0.64
CTDNEP1-202ENST00000570380 PRAMEF14Q5SWL7 426 aa11.04□□□□□ -0.64
CTDNEP1-202ENST00000570380 CCDC83Q8IWF9 413 aa11.04□□□□□ -0.64
CTDNEP1-202ENST00000570380 OR5B17Q8NGF7 314 aa11.04□□□□□ -0.64
CTDNEP1-202ENST00000570380 BIRC7Q96CA5 298 aa11.04□□□□□ -0.64
CTDNEP1-202ENST00000570380 CNDP2Q96KP4 475 aaKnown RBP11.04□□□□□ -0.64
CTDNEP1-202ENST00000570380 MMS19Q96T76 1030 aa11.04□□□□□ -0.64
CTDNEP1-202ENST00000570380 ORAI3Q9BRQ5 295 aa11.04□□□□□ -0.64
CTDNEP1-202ENST00000570380 STRA6Q9BX79 667 aa11.04□□□□□ -0.64
CTDNEP1-202ENST00000570380 KLF16Q9BXK1 252 aaPredicted RBP11.04□□□□□ -0.64
CTDNEP1-202ENST00000570380 NACA2Q9H009 215 aa11.04□□□□□ -0.64
CTDNEP1-202ENST00000570380 CPNE5Q9HCH3 593 aa11.04□□□□□ -0.64
CTDNEP1-202ENST00000570380 INTS13Q9NVM9 706 aa11.04□□□□□ -0.64
CTDNEP1-202ENST00000570380 FAM92AA1XBS5 289 aa11.03□□□□□ -0.64
CTDNEP1-202ENST00000570380 NPC1O15118 1278 aa11.03□□□□□ -0.64
CTDNEP1-202ENST00000570380 TLR5O60602 858 aa11.03□□□□□ -0.64
CTDNEP1-202ENST00000570380 TSPAN3O60637 253 aa11.03□□□□□ -0.64
CTDNEP1-202ENST00000570380 TBX18O95935 607 aa11.03□□□□□ -0.64
CTDNEP1-202ENST00000570380 LDHAP00338 332 aaKnown RBP11.03□□□□□ -0.64
CTDNEP1-202ENST00000570380 PRKCHP24723 683 aa11.03□□□□□ -0.64
CTDNEP1-202ENST00000570380 NEK4P51957 841 aa11.03□□□□□ -0.64
CTDNEP1-202ENST00000570380 MFAP3P55082 362 aa11.03□□□□□ -0.64
CTDNEP1-202ENST00000570380 CDH8P55286 799 aa11.03□□□□□ -0.64
CTDNEP1-202ENST00000570380 ZNF234Q14588 700 aa11.03□□□□□ -0.64
CTDNEP1-202ENST00000570380 ARHGAP40Q5TG30 622 aa11.03□□□□□ -0.64
CTDNEP1-202ENST00000570380 SFR1Q86XK3 245 aa11.03□□□□□ -0.64
CTDNEP1-202ENST00000570380 OR6B3Q8NGW1 331 aa11.03□□□□□ -0.64
CTDNEP1-202ENST00000570380 TSC1Q92574 1164 aa11.03□□□□□ -0.64
CTDNEP1-202ENST00000570380 TTC9Q92623 222 aa11.03□□□□□ -0.64
CTDNEP1-202ENST00000570380 RAD54LQ92698 747 aa11.03□□□□□ -0.64
CTDNEP1-202ENST00000570380 HVCN1Q96D96 273 aa11.03□□□□□ -0.64
CTDNEP1-202ENST00000570380 NAF1Q96HR8 494 aaKnown RBP11.03□□□□□ -0.64
CTDNEP1-202ENST00000570380 ANKRD36BP1Q96IX9 119 aa11.03□□□□□ -0.64
CTDNEP1-202ENST00000570380 LGMNQ99538 433 aa11.03□□□□□ -0.64
CTDNEP1-202ENST00000570380 SNX25Q9H3E2 840 aa11.03□□□□□ -0.64
CTDNEP1-202ENST00000570380 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.03□□□□□ -0.64
CTDNEP1-202ENST00000570380 SLC27A6Q9Y2P4 619 aa11.03□□□□□ -0.64
CTDNEP1-202ENST00000570380 R3HCC1Q9Y3T6 440 aaKnown RBP11.03□□□□□ -0.64
CTDNEP1-202ENST00000570380 DFNA5O60443 496 aa11.02□□□□□ -0.65
CTDNEP1-202ENST00000570380 TACC1O75410 805 aa11.02□□□□□ -0.65
CTDNEP1-202ENST00000570380 KRT10P13645 584 aa11.02□□□□□ -0.65
CTDNEP1-202ENST00000570380 GARTP22102 1010 aa11.02□□□□□ -0.65
CTDNEP1-202ENST00000570380 CD27P26842 260 aa11.02□□□□□ -0.65
CTDNEP1-202ENST00000570380 SLC5A3P53794 718 aa11.02□□□□□ -0.65
CTDNEP1-202ENST00000570380 TMPRSS3P57727 454 aa11.02□□□□□ -0.65
CTDNEP1-202ENST00000570380 SHBQ15464 509 aa11.02□□□□□ -0.65
CTDNEP1-202ENST00000570380 PAQR9Q6ZVX9 377 aa11.02□□□□□ -0.65
CTDNEP1-202ENST00000570380 ADAT2Q7Z6V5 191 aaKnown RBP11.02□□□□□ -0.65
CTDNEP1-202ENST00000570380 RBBP8NLQ8NC74 664 aaPredicted RBP11.02□□□□□ -0.65
CTDNEP1-202ENST00000570380 SAP25Q8TEE9 199 aa11.02□□□□□ -0.65
CTDNEP1-202ENST00000570380 NOC3LQ8WTT2 800 aaKnown RBP11.02□□□□□ -0.65
CTDNEP1-202ENST00000570380 CALML4Q96GE6 196 aa11.02□□□□□ -0.65
CTDNEP1-202ENST00000570380 LLPHQ9BRT6 129 aaKnown RBP11.02□□□□□ -0.65
CTDNEP1-202ENST00000570380 CBWD1Q9BRT8 395 aa11.02□□□□□ -0.65
CTDNEP1-202ENST00000570380 LSM7Q9UK45 103 aaKnown RBP11.02□□□□□ -0.65
CTDNEP1-202ENST00000570380 UBR5O95071 2799 aaPredicted RBP11.01□□□□□ -0.65
CTDNEP1-202ENST00000570380 DOCK9Q9BZ29 2069 aa11.01□□□□□ -0.65
CTDNEP1-202ENST00000570380 SLC26A4O43511 780 aa11.01□□□□□ -0.65
CTDNEP1-202ENST00000570380 FSBPO95073 299 aa11.01□□□□□ -0.65
CTDNEP1-202ENST00000570380 SEMA4FO95754 770 aa11.01□□□□□ -0.65
CTDNEP1-202ENST00000570380 TNNC2P02585 160 aa11.01□□□□□ -0.65
CTDNEP1-202ENST00000570380 ITGAVP06756 1048 aa11.01□□□□□ -0.65
CTDNEP1-202ENST00000570380 EPHX1P07099 455 aa11.01□□□□□ -0.65
CTDNEP1-202ENST00000570380 GLDCP23378 1020 aa11.01□□□□□ -0.65
CTDNEP1-202ENST00000570380 DDIT3P35638 169 aa11.01□□□□□ -0.65
CTDNEP1-202ENST00000570380 UBA7P41226 1012 aa11.01□□□□□ -0.65
CTDNEP1-202ENST00000570380 CSRP3P50461 194 aa11.01□□□□□ -0.65
CTDNEP1-202ENST00000570380 L1TD1Q5T7N2 865 aaKnown RBP11.01□□□□□ -0.65
CTDNEP1-202ENST00000570380 FYB2Q5VWT5 728 aa11.01□□□□□ -0.65
CTDNEP1-202ENST00000570380 ARL6IP4Q66PJ3 421 aaKnown RBP11.01□□□□□ -0.65
CTDNEP1-202ENST00000570380 Q6ZNB5 142 aa11.01□□□□□ -0.65
CTDNEP1-202ENST00000570380 CACTIN-AS1Q8N1I8 211 aa11.01□□□□□ -0.65
CTDNEP1-202ENST00000570380 EID2Q8N6I1 236 aa11.01□□□□□ -0.65
CTDNEP1-202ENST00000570380 FAM184AQ8NB25 1140 aa11.01□□□□□ -0.65
CTDNEP1-202ENST00000570380 B3GALNT2Q8NCR0 500 aa11.01□□□□□ -0.65
CTDNEP1-202ENST00000570380 ZNF248Q8NDW4 579 aa11.01□□□□□ -0.65
CTDNEP1-202ENST00000570380 OR2T3Q8NH03 318 aa11.01□□□□□ -0.65
CTDNEP1-202ENST00000570380 UCMAQ8WVF2 138 aa11.01□□□□□ -0.65
CTDNEP1-202ENST00000570380 SORCS1Q8WY21 1168 aa11.01□□□□□ -0.65
CTDNEP1-202ENST00000570380 PIWIL1Q96J94 861 aaKnown RBP11.01□□□□□ -0.65
CTDNEP1-202ENST00000570380 ACCSQ96QU6 501 aa11.01□□□□□ -0.65
CTDNEP1-202ENST00000570380 ELF4Q99607 663 aaPredicted RBP11.01□□□□□ -0.65
CTDNEP1-202ENST00000570380 LHX5Q9H2C1 402 aa11.01□□□□□ -0.65
CTDNEP1-202ENST00000570380 PCIF1Q9H4Z3 704 aa11.01□□□□□ -0.65
CTDNEP1-202ENST00000570380 COMMD8Q9NX08 183 aa11.01□□□□□ -0.65
CTDNEP1-202ENST00000570380 ELOVL2Q9NXB9 296 aa11.01□□□□□ -0.65
CTDNEP1-202ENST00000570380 TBC1D7Q9P0N9 293 aa11.01□□□□□ -0.65
CTDNEP1-202ENST00000570380 EXOC7Q9UPT5 735 aa11.01□□□□□ -0.65
CTDNEP1-202ENST00000570380 CLCA2Q9UQC9 943 aa11.01□□□□□ -0.65
CTDNEP1-202ENST00000570380 UNC79Q9P2D8 2635 aa11.01□□□□□ -0.65
CTDNEP1-202ENST00000570380 BOD1L1Q8NFC6 3051 aa11□□□□□ -0.65
CTDNEP1-202ENST00000570380 VILLO15195 856 aa11□□□□□ -0.65
CTDNEP1-202ENST00000570380 CST3P01034 146 aaPredicted RBP11□□□□□ -0.65
CTDNEP1-202ENST00000570380 PENKP01210 267 aaPredicted RBP11□□□□□ -0.65
CTDNEP1-202ENST00000570380 WNT1P04628 370 aa11□□□□□ -0.65
CTDNEP1-202ENST00000570380 IGHV4-34P06331 123 aa11□□□□□ -0.65
CTDNEP1-202ENST00000570380 FAM163BP0C2L3 166 aa11□□□□□ -0.65
CTDNEP1-202ENST00000570380 C7P10643 843 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms