RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 BCKDHBP21953 392 aa9.36□□□□□ -0.91
NPLOC4-204ENST00000570324 P2RY2P41231 377 aa9.36□□□□□ -0.91
NPLOC4-204ENST00000570324 DPP6P42658 865 aa9.36□□□□□ -0.91
NPLOC4-204ENST00000570324 HARS2P49590 506 aaKnown RBP9.36□□□□□ -0.91
NPLOC4-204ENST00000570324 ARID5AQ03989 594 aa9.36□□□□□ -0.91
NPLOC4-204ENST00000570324 PDE4CQ08493 712 aa9.36□□□□□ -0.91
NPLOC4-204ENST00000570324 ADIGQ0VDE8 80 aa9.36□□□□□ -0.91
NPLOC4-204ENST00000570324 STARD3Q14849 445 aa9.36□□□□□ -0.91
NPLOC4-204ENST00000570324 RAB41Q5JT25 222 aa9.36□□□□□ -0.91
NPLOC4-204ENST00000570324 DAB2IPQ5VWQ8 1189 aa9.36□□□□□ -0.91
NPLOC4-204ENST00000570324 TCEAL6Q6IPX3 200 aa9.36□□□□□ -0.91
NPLOC4-204ENST00000570324 TMEM270Q6UE05 265 aa9.36□□□□□ -0.91
NPLOC4-204ENST00000570324 SLC36A4Q6YBV0 504 aa9.36□□□□□ -0.91
NPLOC4-204ENST00000570324 CREBRFQ8IUR6 639 aa9.36□□□□□ -0.91
NPLOC4-204ENST00000570324 DENND1CQ8IV53 801 aa9.36□□□□□ -0.91
NPLOC4-204ENST00000570324 ZC3H3Q8IXZ2 948 aaKnown RBP9.36□□□□□ -0.91
NPLOC4-204ENST00000570324 ELOA2Q8IYF1 753 aaPredicted RBP9.36□□□□□ -0.91
NPLOC4-204ENST00000570324 TMEFF1Q8IYR6 380 aa9.36□□□□□ -0.91
NPLOC4-204ENST00000570324 PHTF2Q8N3S3 785 aa9.36□□□□□ -0.91
NPLOC4-204ENST00000570324 SPATA20Q8TB22 786 aa9.36□□□□□ -0.91
NPLOC4-204ENST00000570324 UBA3Q8TBC4 463 aa9.36□□□□□ -0.91
NPLOC4-204ENST00000570324 DDI1Q8WTU0 396 aa9.36□□□□□ -0.91
NPLOC4-204ENST00000570324 NELFBQ8WX92 580 aa9.36□□□□□ -0.91
NPLOC4-204ENST00000570324 GOLGA1Q92805 767 aa9.36□□□□□ -0.91
NPLOC4-204ENST00000570324 TCEAL3Q969E4 200 aa9.36□□□□□ -0.91
NPLOC4-204ENST00000570324 PLD4Q96BZ4 506 aa9.36□□□□□ -0.91
NPLOC4-204ENST00000570324 NUSAP1Q9BXS6 441 aaKnown RBP9.36□□□□□ -0.91
NPLOC4-204ENST00000570324 ULBP1Q9BZM6 244 aa9.36□□□□□ -0.91
NPLOC4-204ENST00000570324 ABCC13Q9NSE7 274 aa9.36□□□□□ -0.91
NPLOC4-204ENST00000570324 CTNND2Q9UQB3 1225 aa9.36□□□□□ -0.91
NPLOC4-204ENST00000570324 STARD13Q9Y3M8 1113 aa9.36□□□□□ -0.91
NPLOC4-204ENST00000570324 MYO15AQ9UKN7 3530 aa9.36□□□□□ -0.91
NPLOC4-204ENST00000570324 SDK1Q7Z5N4 2213 aa9.35□□□□□ -0.91
NPLOC4-204ENST00000570324 P4HA2O15460 535 aa9.35□□□□□ -0.91
NPLOC4-204ENST00000570324 AP5Z1O43299 807 aa9.35□□□□□ -0.91
NPLOC4-204ENST00000570324 GREM1O60565 184 aa9.35□□□□□ -0.91
NPLOC4-204ENST00000570324 NDUFS2O75306 463 aa9.35□□□□□ -0.91
NPLOC4-204ENST00000570324 ZNF217O75362 1048 aa9.35□□□□□ -0.91
NPLOC4-204ENST00000570324 PAEPP09466 180 aa9.35□□□□□ -0.91
NPLOC4-204ENST00000570324 HNRNPLP14866 589 aaKnown RBP eCLIP9.35□□□□□ -0.91
NPLOC4-204ENST00000570324 STX17P56962 302 aa9.35□□□□□ -0.91
NPLOC4-204ENST00000570324 RPL6Q02878 288 aaKnown RBP9.35□□□□□ -0.91
NPLOC4-204ENST00000570324 STILQ15468 1287 aa9.35□□□□□ -0.91
NPLOC4-204ENST00000570324 EGFLAMQ63HQ2 1017 aa9.35□□□□□ -0.91
NPLOC4-204ENST00000570324 Q6ZNB5 142 aa9.35□□□□□ -0.91
NPLOC4-204ENST00000570324 TOGARAM2Q6ZUX3 1019 aa9.35□□□□□ -0.91
NPLOC4-204ENST00000570324 FMNL3Q8IVF7 1028 aa9.35□□□□□ -0.91
NPLOC4-204ENST00000570324 OLIG1Q8TAK6 271 aa9.35□□□□□ -0.91
NPLOC4-204ENST00000570324 ERLEC1Q96DZ1 483 aa9.35□□□□□ -0.91
NPLOC4-204ENST00000570324 TMEM9BQ9NQ34 198 aa9.35□□□□□ -0.91
NPLOC4-204ENST00000570324 RXFP3Q9NSD7 469 aa9.35□□□□□ -0.91
NPLOC4-204ENST00000570324 CACNA2D2Q9NY47 1150 aa9.35□□□□□ -0.91
NPLOC4-204ENST00000570324 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.35□□□□□ -0.91
NPLOC4-204ENST00000570324 ZNF292O60281 2723 aa9.35□□□□□ -0.91
NPLOC4-204ENST00000570324 C4orf47A7E2U8 309 aa9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 PRRT4C9JH25 899 aa9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 M0QYV0 167 aa9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 TULP2O00295 520 aa9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 O00370 1275 aa9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 GFRA2O00451 464 aa9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 SYNCRIPO60506 623 aaKnown RBP9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 TSPAN3O60637 253 aa9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 GADD45BO75293 160 aaPredicted RBP9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 KLKB1P03952 638 aa9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 ADRB1P08588 477 aa9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 KRT5P13647 590 aa9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 CD44P16070 742 aaKnown RBP9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 GABRG2P18507 467 aa9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 RGS7P49802 495 aa9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 ATXN3P54252 364 aaPredicted RBP9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 KCNH2Q12809 1159 aa9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 LMAN2Q12907 356 aa9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 PAK1Q13153 545 aa9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 MORC3Q14149 939 aa9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 MAP7D1Q3KQU3 841 aa9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 UAP1L1Q3KQV9 507 aa9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 MPPE1Q53F39 396 aa9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 TRIM61Q5EBN2 209 aa9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 SPDYCQ5MJ68 293 aa9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 BSPRYQ5W0U4 402 aa9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 LYSMD4Q5XG99 296 aa9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 PM20D1Q6GTS8 502 aa9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 LCLAT1Q6UWP7 414 aa9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 KIAA1324Q6UXG2 1013 aaKnown RBP9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 RRAGAQ7L523 313 aa9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 ANKS1BQ7Z6G8 1248 aa9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 SYT12Q8IV01 421 aa9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 DEFB119Q8N690 84 aa9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 FRMD1Q8N878 549 aa9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 EHBP1Q8NDI1 1231 aa9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 IPO4Q8TEX9 1081 aaKnown RBP9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 KCTD13Q8WZ19 329 aa9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 NDRG1Q92597 394 aaKnown RBP9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 EDEM1Q92611 657 aa9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 ACOX2Q99424 681 aa9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 SRRTQ9BXP5 876 aaKnown RBP9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 CIPCQ9C0C6 399 aa9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 CNGB3Q9NQW8 809 aa9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 CALCOCO1Q9P1Z2 691 aa9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 AGO1Q9UL18 857 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms