RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 KLHL3Q9UH77 587 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 MAFFQ9ULX9 164 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 SCAF8Q9UPN6 1271 aaKnown RBP8.37□□□□□ -1.07
TCF4-246ENST00000570287 EXOC7Q9UPT5 735 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 GMEB1Q9Y692 573 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 PARP14Q460N5 1801 aa8.37□□□□□ -1.07
TCF4-246ENST00000570287 PABPN1LA6NDY0 278 aaKnown RBP8.36□□□□□ -1.07
TCF4-246ENST00000570287 FOXN3O00409 490 aaPredicted RBP8.36□□□□□ -1.07
TCF4-246ENST00000570287 ATP9AO75110 1047 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 UPP2O95045 317 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 ASLP04424 464 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 PEX5P50542 639 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 RNASE9P60153 205 aaKnown RBP8.36□□□□□ -1.07
TCF4-246ENST00000570287 DLG4P78352 724 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 PPATQ06203 517 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 PPP3CAQ08209 521 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 CLN3Q13286 438 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 UGCGQ16739 394 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 ZC3H12BQ5HYM0 836 aaKnown RBP8.36□□□□□ -1.07
TCF4-246ENST00000570287 DCAF15Q66K64 600 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 LIX1LQ8IVB5 337 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 UBLCP1Q8WVY7 318 aaPredicted RBP8.36□□□□□ -1.07
TCF4-246ENST00000570287 MAIP1Q8WWC4 291 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 TRIM63Q969Q1 353 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 VMP1Q96GC9 406 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 AGPAT1Q99943 283 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 FAM192AQ9GZU8 254 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 GOLPH3Q9H4A6 298 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 UBE2TQ9NPD8 197 aaPredicted RBP8.36□□□□□ -1.07
TCF4-246ENST00000570287 RASSF1Q9NS23 344 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 TTC7AQ9ULT0 858 aaPredicted RBP8.36□□□□□ -1.07
TCF4-246ENST00000570287 ZMYND8Q9ULU4 1186 aaPredicted RBP8.36□□□□□ -1.07
TCF4-246ENST00000570287 NOC2LQ9Y3T9 749 aaKnown RBP8.36□□□□□ -1.07
TCF4-246ENST00000570287 DOCK1Q14185 1865 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 ATE1O95260 518 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 CCNE2O96020 404 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 EGFRP00533 1210 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 PEX2P28328 305 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 CCND2P30279 289 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 GBP1P32455 592 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 OAZ1P54368 228 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 PEX3P56589 373 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 BACE1P56817 501 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 SLC9A5Q14940 896 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 XKR9Q5GH70 373 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 C1orf220Q5T0J3 134 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 ITPRIPL1Q6GPH6 555 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 VSIG10LQ86VR7 867 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 CHTF18Q8WVB6 975 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 TMEM237Q96Q45 408 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 SLITRK6Q9H5Y7 841 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 PDP2Q9P2J9 529 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 RPL26L1Q9UNX3 145 aaKnown RBP8.36□□□□□ -1.07
TCF4-246ENST00000570287 INVSQ9Y283 1065 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 A0A087WV62 115 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 MEIS3P2A8K0S8 358 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 SLC16A4O15374 487 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 DKC1O60832 514 aaKnown RBP eCLIP8.36□□□□□ -1.07
TCF4-246ENST00000570287 UNC5CO95185 931 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 AGTP01019 485 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 HADHBP55084 474 aaKnown RBP8.36□□□□□ -1.07
TCF4-246ENST00000570287 SEMA5AQ13591 1074 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 NLRX1Q86UT6 975 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 RHOT2Q8IXI1 618 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 KLHL7Q8IXQ5 586 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 FITM2Q8N6M3 262 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 ATP8B4Q8TF62 1192 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 RAB3IPQ96QF0 476 aaPredicted RBP8.36□□□□□ -1.07
TCF4-246ENST00000570287 PRMT1Q99873 361 aaKnown RBP8.36□□□□□ -1.07
TCF4-246ENST00000570287 SLC39A3Q9BRY0 314 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 LRMDAQ9H2I8 198 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 C17orf75Q9HAS0 396 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 TMEM165Q9HC07 324 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 RNF146Q9NTX7 359 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 HACL1Q9UJ83 578 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 ZNF112Q9UJU3 913 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 COQ6Q9Y2Z9 468 aa8.36□□□□□ -1.07
TCF4-246ENST00000570287 FAM25EA8MYX2 175 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 LRRN2O75325 713 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 DNTTP04053 509 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 SHBGP04278 402 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 XPAP23025 273 aaPredicted RBP8.35□□□□□ -1.07
TCF4-246ENST00000570287 GCLMP48507 274 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 MXI1P50539 228 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 GALNT1Q10472 559 aaPredicted RBP8.35□□□□□ -1.07
TCF4-246ENST00000570287 ACVR2BQ13705 512 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 BAATQ14032 418 aaPredicted RBP8.35□□□□□ -1.07
TCF4-246ENST00000570287 DBN1Q16643 649 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 RNF220Q5VTB9 566 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 TMEM154Q6P9G4 183 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 PDZD4Q76G19 769 aaPredicted RBP8.35□□□□□ -1.07
TCF4-246ENST00000570287 ARHGEF19Q8IW93 802 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 SCYL3Q8IZE3 742 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 NKAIN3Q8N8D7 197 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 ANKLE1Q8NAG6 615 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 DEPTORQ8TB45 409 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 PRR14Q9BWN1 585 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 RNF38Q9H0F5 515 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 GPRC5CQ9NQ84 441 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 FAM114A2Q9NRY5 505 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms