RNA–Protein interactions for RNA: ENST00000570117.5

TAF1C-222, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit C, human

APPRIS ALT2 TSL 2 BASIC

Gene TAF1C, Length 2,349 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF1C-222	ENST00000570117	DHX35	Q9H5Z1	703 aa	Known RBP	18.16	■□□□□ 0.5
TAF1C-222	ENST00000570117	UGT1A7	Q9HAW7	530 aa		18.16	■□□□□ 0.5
TAF1C-222	ENST00000570117	UGT1A10	Q9HAW8	530 aa		18.16	■□□□□ 0.5
TAF1C-222	ENST00000570117	UGT1A8	Q9HAW9	530 aa		18.16	■□□□□ 0.5
TAF1C-222	ENST00000570117	GTF2IRD1	Q9UHL9	959 aa		18.16	■□□□□ 0.5
TAF1C-222	ENST00000570117	DCTN4	Q9UJW0	460 aa		18.16	■□□□□ 0.5
TAF1C-222	ENST00000570117	MFHAS1	Q9Y4C4	1052 aa		18.16	■□□□□ 0.5
TAF1C-222	ENST00000570117	NR2E3	Q9Y5X4	410 aa		18.16	■□□□□ 0.5
TAF1C-222	ENST00000570117	RALGAPA2	Q2PPJ7	1873 aa		18.16	■□□□□ 0.5
TAF1C-222	ENST00000570117	PIR	O00625	290 aa		18.15	■□□□□ 0.5
TAF1C-222	ENST00000570117	ATP5H	O75947	161 aa		18.15	■□□□□ 0.5
TAF1C-222	ENST00000570117	INHBE	P58166	350 aa		18.15	■□□□□ 0.5
TAF1C-222	ENST00000570117	TAF1B	Q53T94	588 aa	Predicted RBP	18.15	■□□□□ 0.5
TAF1C-222	ENST00000570117	MPP5	Q8N3R9	675 aa		18.15	■□□□□ 0.5
TAF1C-222	ENST00000570117	MCU	Q8NE86	351 aa		18.15	■□□□□ 0.5
TAF1C-222	ENST00000570117	SIGLEC10	Q96LC7	697 aa		18.15	■□□□□ 0.5
TAF1C-222	ENST00000570117	EBF2	Q9HAK2	575 aa		18.15	■□□□□ 0.5
TAF1C-222	ENST00000570117	KCNK13	Q9HB14	408 aa		18.15	■□□□□ 0.5
TAF1C-222	ENST00000570117	TRIM49D1	C9J1S8	452 aa		18.15	■□□□□ 0.5
TAF1C-222	ENST00000570117	GCAT	O75600	419 aa		18.15	■□□□□ 0.5
TAF1C-222	ENST00000570117	LCP1	P13796	627 aa		18.15	■□□□□ 0.5
TAF1C-222	ENST00000570117	GRIA1	P42261	906 aa		18.15	■□□□□ 0.5
TAF1C-222	ENST00000570117	BST2	Q10589	180 aa	Known RBP	18.15	■□□□□ 0.5
TAF1C-222	ENST00000570117	PRKD1	Q15139	912 aa	Predicted RBP	18.15	■□□□□ 0.5
TAF1C-222	ENST00000570117	PARP6	Q2NL67	630 aa		18.15	■□□□□ 0.5
TAF1C-222	ENST00000570117	PRAMEF19	Q5SWL8	479 aa		18.15	■□□□□ 0.5
TAF1C-222	ENST00000570117	NOTUM	Q6P988	496 aa		18.15	■□□□□ 0.5
TAF1C-222	ENST00000570117	UNC5A	Q6ZN44	842 aa		18.15	■□□□□ 0.5
TAF1C-222	ENST00000570117	MTDH	Q86UE4	582 aa	Known RBP	18.15	■□□□□ 0.5
TAF1C-222	ENST00000570117	CTAGE3P	Q8IX95	158 aa		18.15	■□□□□ 0.5
TAF1C-222	ENST00000570117	CSPG4P5	Q96PW8	444 aa		18.15	■□□□□ 0.5
TAF1C-222	ENST00000570117	ZNF180	Q9UJW8	692 aa		18.15	■□□□□ 0.5
TAF1C-222	ENST00000570117	AP4E1	Q9UPM8	1137 aa		18.15	■□□□□ 0.5
TAF1C-222	ENST00000570117	TRDMT1	O14717	391 aa	Known RBP	18.14	■□□□□ 0.49
TAF1C-222	ENST00000570117	DARS	P14868	501 aa	Known RBP	18.14	■□□□□ 0.49
TAF1C-222	ENST00000570117	SPDYA	Q5MJ70	313 aa		18.14	■□□□□ 0.49
TAF1C-222	ENST00000570117	TTC39B	Q5VTQ0	682 aa	Predicted RBP	18.14	■□□□□ 0.49
TAF1C-222	ENST00000570117	ZNF449	Q6P9G9	518 aa		18.14	■□□□□ 0.49
TAF1C-222	ENST00000570117	KCNT2	Q6UVM3	1135 aa		18.14	■□□□□ 0.49
TAF1C-222	ENST00000570117	ARC	Q7LC44	396 aa		18.14	■□□□□ 0.49
TAF1C-222	ENST00000570117	PYROXD2	Q8N2H3	581 aa		18.14	■□□□□ 0.49
TAF1C-222	ENST00000570117	TMEM40	Q8WWA1	233 aa		18.14	■□□□□ 0.49
TAF1C-222	ENST00000570117	APOL6	Q9BWW8	343 aa		18.14	■□□□□ 0.49
TAF1C-222	ENST00000570117	FLRT1	Q9NZU1	646 aa		18.14	■□□□□ 0.49
TAF1C-222	ENST00000570117	USP3	Q9Y6I4	520 aa		18.14	■□□□□ 0.49
TAF1C-222	ENST00000570117	HMX2	A2RU54	273 aa		18.14	■□□□□ 0.49
TAF1C-222	ENST00000570117	RRN3P2	A6NIE6	340 aa		18.14	■□□□□ 0.49
TAF1C-222	ENST00000570117	FAM155A	B1AL88	458 aa	Predicted RBP	18.14	■□□□□ 0.49
TAF1C-222	ENST00000570117	RFPL1	O75677	317 aa		18.14	■□□□□ 0.49
TAF1C-222	ENST00000570117	APOE	P02649	317 aa		18.14	■□□□□ 0.49
TAF1C-222	ENST00000570117	EZR	P15311	586 aa	Known RBP	18.14	■□□□□ 0.49
TAF1C-222	ENST00000570117	BGN	P21810	368 aa		18.14	■□□□□ 0.49
TAF1C-222	ENST00000570117	GNL1	P36915	607 aa	Predicted RBP	18.14	■□□□□ 0.49
TAF1C-222	ENST00000570117	FBXO47	Q5MNV8	452 aa		18.14	■□□□□ 0.49
TAF1C-222	ENST00000570117	FYB2	Q5VWT5	728 aa		18.14	■□□□□ 0.49
TAF1C-222	ENST00000570117	NCBP2-AS2	Q69YL0	99 aa		18.14	■□□□□ 0.49
TAF1C-222	ENST00000570117	TRMT10B	Q6PF06	316 aa	Known RBP	18.14	■□□□□ 0.49
TAF1C-222	ENST00000570117	CLNK	Q7Z7G1	428 aa		18.14	■□□□□ 0.49
TAF1C-222	ENST00000570117	CDKL3	Q8IVW4	592 aa	Predicted RBP	18.14	■□□□□ 0.49
TAF1C-222	ENST00000570117	INPP5D	Q92835	1189 aa		18.14	■□□□□ 0.49
TAF1C-222	ENST00000570117	TTC17	Q96AE7	1141 aa		18.14	■□□□□ 0.49
TAF1C-222	ENST00000570117	SRPK1	Q96SB4	655 aa	Known RBP	18.14	■□□□□ 0.49
TAF1C-222	ENST00000570117	NCAPG	Q9BPX3	1015 aa		18.14	■□□□□ 0.49
TAF1C-222	ENST00000570117	TSSK1B	Q9BXA7	367 aa		18.14	■□□□□ 0.49
TAF1C-222	ENST00000570117	RNF39	Q9H2S5	420 aa		18.14	■□□□□ 0.49
TAF1C-222	ENST00000570117	DTL	Q9NZJ0	730 aa		18.14	■□□□□ 0.49
TAF1C-222	ENST00000570117	KLK14	Q9P0G3	267 aa		18.14	■□□□□ 0.49
TAF1C-222	ENST00000570117	DOCK3	Q8IZD9	2030 aa		18.13	■□□□□ 0.49
TAF1C-222	ENST00000570117	SMIM28	A0A1B0GU29	152 aa		18.13	■□□□□ 0.49
TAF1C-222	ENST00000570117	CSH1	P0DML2	217 aa		18.13	■□□□□ 0.49
TAF1C-222	ENST00000570117	CSH2	P0DML3	217 aa		18.13	■□□□□ 0.49
TAF1C-222	ENST00000570117	SMIM10L2A	P0DMW4	78 aa		18.13	■□□□□ 0.49
TAF1C-222	ENST00000570117	SMIM10L2B	P0DMW5	78 aa		18.13	■□□□□ 0.49
TAF1C-222	ENST00000570117	TROVE2	P10155	538 aa	Known RBP eCLIP	18.13	■□□□□ 0.49
TAF1C-222	ENST00000570117	SCNN1A	P37088	669 aa		18.13	■□□□□ 0.49
TAF1C-222	ENST00000570117	BCAT1	P54687	386 aa		18.13	■□□□□ 0.49
TAF1C-222	ENST00000570117	SNX16	P57768	344 aa		18.13	■□□□□ 0.49
TAF1C-222	ENST00000570117	MRPS5	P82675	430 aa	Known RBP	18.13	■□□□□ 0.49
TAF1C-222	ENST00000570117	SOX4	Q06945	474 aa	Predicted RBP	18.13	■□□□□ 0.49
TAF1C-222	ENST00000570117	LIMS2	Q7Z4I7	341 aa		18.13	■□□□□ 0.49
TAF1C-222	ENST00000570117	NDRG1	Q92597	394 aa	Known RBP	18.13	■□□□□ 0.49
TAF1C-222	ENST00000570117	QKI	Q96PU8	341 aa	Known RBP eCLIP	18.13	■□□□□ 0.49
TAF1C-222	ENST00000570117	UBQLN1	Q9UMX0	589 aa	Known RBP	18.13	■□□□□ 0.49
TAF1C-222	ENST00000570117	TLL2	Q9Y6L7	1015 aa		18.13	■□□□□ 0.49
TAF1C-222	ENST00000570117		A6NJR5	290 aa		18.12	■□□□□ 0.49
TAF1C-222	ENST00000570117	KPNA7	A9QM74	516 aa		18.12	■□□□□ 0.49
TAF1C-222	ENST00000570117	TRAFD1	O14545	582 aa	Predicted RBP	18.12	■□□□□ 0.49
TAF1C-222	ENST00000570117	SNRPA	P09012	282 aa	Known RBP	18.12	■□□□□ 0.49
TAF1C-222	ENST00000570117	AMPD1	P23109	780 aa		18.12	■□□□□ 0.49
TAF1C-222	ENST00000570117	TKT	P29401	623 aa	Known RBP	18.12	■□□□□ 0.49
TAF1C-222	ENST00000570117	SERPINB4	P48594	390 aa		18.12	■□□□□ 0.49
TAF1C-222	ENST00000570117	TLDC1	Q6P9B6	456 aa		18.12	■□□□□ 0.49
TAF1C-222	ENST00000570117	VPS52	Q8N1B4	723 aa		18.12	■□□□□ 0.49
TAF1C-222	ENST00000570117	SLC2A14	Q8TDB8	520 aa		18.12	■□□□□ 0.49
TAF1C-222	ENST00000570117	LRRC39	Q96DD0	335 aa		18.12	■□□□□ 0.49
TAF1C-222	ENST00000570117	GOLGA2P5	Q9HBQ8	144 aa		18.12	■□□□□ 0.49
TAF1C-222	ENST00000570117	ZFYVE28	Q9HCC9	887 aa		18.12	■□□□□ 0.49
TAF1C-222	ENST00000570117	ZFP69B	Q9UJL9	534 aa		18.12	■□□□□ 0.49
TAF1C-222	ENST00000570117	MBLAC1	A4D2B0	266 aa	Predicted RBP	18.12	■□□□□ 0.49
TAF1C-222	ENST00000570117	DLD	P09622	509 aa	Known RBP	18.12	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms