RNA–Protein interactions for RNA: ENST00000569904.5

SCAMP2-212, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-212ENST00000569904 XPO1O14980 1071 aaKnown RBP13□□□□□ -0.33
SCAMP2-212ENST00000569904 NPC1O15118 1278 aa13□□□□□ -0.33
SCAMP2-212ENST00000569904 CHKAP35790 457 aa13□□□□□ -0.33
SCAMP2-212ENST00000569904 DGKGP49619 791 aa13□□□□□ -0.33
SCAMP2-212ENST00000569904 ZNF132P52740 706 aa13□□□□□ -0.33
SCAMP2-212ENST00000569904 PMS1P54277 932 aaKnown RBP13□□□□□ -0.33
SCAMP2-212ENST00000569904 CUL2Q13617 745 aa13□□□□□ -0.33
SCAMP2-212ENST00000569904 N4BP2L1Q5TBK1 243 aaPredicted RBP13□□□□□ -0.33
SCAMP2-212ENST00000569904 SLC23A3Q6PIS1 610 aa13□□□□□ -0.33
SCAMP2-212ENST00000569904 SLC36A4Q6YBV0 504 aa13□□□□□ -0.33
SCAMP2-212ENST00000569904 TPGS1Q6ZTW0 290 aa13□□□□□ -0.33
SCAMP2-212ENST00000569904 SYT12Q8IV01 421 aa13□□□□□ -0.33
SCAMP2-212ENST00000569904 SCML4Q8N228 414 aa13□□□□□ -0.33
SCAMP2-212ENST00000569904 CPXM2Q8N436 756 aa13□□□□□ -0.33
SCAMP2-212ENST00000569904 FRMD1Q8N878 549 aa13□□□□□ -0.33
SCAMP2-212ENST00000569904 IPO4Q8TEX9 1081 aaKnown RBP13□□□□□ -0.33
SCAMP2-212ENST00000569904 TSG101Q99816 390 aa13□□□□□ -0.33
SCAMP2-212ENST00000569904 CALCOCO1Q9P1Z2 691 aa13□□□□□ -0.33
SCAMP2-212ENST00000569904 BCCIPQ9P287 314 aaKnown RBP eCLIP13□□□□□ -0.33
SCAMP2-212ENST00000569904 PILRBQ9UKJ0 227 aa13□□□□□ -0.33
SCAMP2-212ENST00000569904 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.99□□□□□ -0.33
SCAMP2-212ENST00000569904 IGHV1OR15-9A0A0B4J2B8 117 aa12.99□□□□□ -0.33
SCAMP2-212ENST00000569904 C4orf47A7E2U8 309 aa12.99□□□□□ -0.33
SCAMP2-212ENST00000569904 PATE3B3GLJ2 98 aa12.99□□□□□ -0.33
SCAMP2-212ENST00000569904 AP5Z1O43299 807 aa12.99□□□□□ -0.33
SCAMP2-212ENST00000569904 ZNF217O75362 1048 aa12.99□□□□□ -0.33
SCAMP2-212ENST00000569904 SMC2O95347 1197 aa12.99□□□□□ -0.33
SCAMP2-212ENST00000569904 C7P10643 843 aa12.99□□□□□ -0.33
SCAMP2-212ENST00000569904 NDUFV2P19404 249 aa12.99□□□□□ -0.33
SCAMP2-212ENST00000569904 CSRP1P21291 193 aaKnown RBP12.99□□□□□ -0.33
SCAMP2-212ENST00000569904 CORO1AP31146 461 aaKnown RBP12.99□□□□□ -0.33
SCAMP2-212ENST00000569904 PTGER3P43115 390 aa12.99□□□□□ -0.33
SCAMP2-212ENST00000569904 DHPSP49366 369 aaPredicted RBP12.99□□□□□ -0.33
SCAMP2-212ENST00000569904 BCAT1P54687 386 aa12.99□□□□□ -0.33
SCAMP2-212ENST00000569904 SLC8A3P57103 927 aa12.99□□□□□ -0.33
SCAMP2-212ENST00000569904 YWHAGP61981 247 aaKnown RBP eCLIP12.99□□□□□ -0.33
SCAMP2-212ENST00000569904 IRX4P78413 519 aa12.99□□□□□ -0.33
SCAMP2-212ENST00000569904 NUCB2P80303 420 aa12.99□□□□□ -0.33
SCAMP2-212ENST00000569904 LMAN2Q12907 356 aa12.99□□□□□ -0.33
SCAMP2-212ENST00000569904 PKDCCQ504Y2 493 aa12.99□□□□□ -0.33
SCAMP2-212ENST00000569904 DAB2IPQ5VWQ8 1189 aa12.99□□□□□ -0.33
SCAMP2-212ENST00000569904 METTL3Q86U44 580 aaKnown RBP12.99□□□□□ -0.33
SCAMP2-212ENST00000569904 TMEFF1Q8IYR6 380 aa12.99□□□□□ -0.33
SCAMP2-212ENST00000569904 CHPFQ8IZ52 775 aa12.99□□□□□ -0.33
SCAMP2-212ENST00000569904 RBBP8NLQ8NC74 664 aaPredicted RBP12.99□□□□□ -0.33
SCAMP2-212ENST00000569904 KCTD13Q8WZ19 329 aa12.99□□□□□ -0.33
SCAMP2-212ENST00000569904 ACOX2Q99424 681 aa12.99□□□□□ -0.33
SCAMP2-212ENST00000569904 TMEM9BQ9NQ34 198 aa12.99□□□□□ -0.33
SCAMP2-212ENST00000569904 TMEM74BQ9NUR3 256 aa12.99□□□□□ -0.33
SCAMP2-212ENST00000569904 STOML2Q9UJZ1 356 aa12.99□□□□□ -0.33
SCAMP2-212ENST00000569904 TSPAN16Q9UKR8 245 aa12.99□□□□□ -0.33
SCAMP2-212ENST00000569904 ANGPTL2Q9UKU9 493 aa12.99□□□□□ -0.33
SCAMP2-212ENST00000569904 AGO1Q9UL18 857 aaKnown RBP12.99□□□□□ -0.33
SCAMP2-212ENST00000569904 KIAA1257Q9ULG3 409 aa12.99□□□□□ -0.33
SCAMP2-212ENST00000569904 EPG5Q9HCE0 2579 aa12.99□□□□□ -0.33
SCAMP2-212ENST00000569904 TPRP12270 2363 aaKnown RBP12.98□□□□□ -0.33
SCAMP2-212ENST00000569904 TRIM49BA6NDI0 452 aa12.98□□□□□ -0.33
SCAMP2-212ENST00000569904 ZBED1O96006 694 aa12.98□□□□□ -0.33
SCAMP2-212ENST00000569904 TBXAS1P24557 533 aaPredicted RBP12.98□□□□□ -0.33
SCAMP2-212ENST00000569904 PPP1R2P41236 205 aa12.98□□□□□ -0.33
SCAMP2-212ENST00000569904 TKTL1P51854 596 aa12.98□□□□□ -0.33
SCAMP2-212ENST00000569904 MFAP3P55082 362 aa12.98□□□□□ -0.33
SCAMP2-212ENST00000569904 YWHAEP62258 255 aaKnown RBP12.98□□□□□ -0.33
SCAMP2-212ENST00000569904 PDE4CQ08493 712 aa12.98□□□□□ -0.33
SCAMP2-212ENST00000569904 BST2Q10589 180 aaKnown RBP12.98□□□□□ -0.33
SCAMP2-212ENST00000569904 TRIP4Q15650 581 aaPredicted RBP12.98□□□□□ -0.33
SCAMP2-212ENST00000569904 DCAF17Q5H9S7 520 aaPredicted RBP12.98□□□□□ -0.33
SCAMP2-212ENST00000569904 TCERG1LQ5VWI1 586 aa12.98□□□□□ -0.33
SCAMP2-212ENST00000569904 LYSMD4Q5XG99 296 aa12.98□□□□□ -0.33
SCAMP2-212ENST00000569904 SDE2Q6IQ49 451 aa12.98□□□□□ -0.33
SCAMP2-212ENST00000569904 KIAA1211LQ6NV74 962 aa12.98□□□□□ -0.33
SCAMP2-212ENST00000569904 PIGKQ92643 395 aa12.98□□□□□ -0.33
SCAMP2-212ENST00000569904 SMARCE1Q969G3 411 aa12.98□□□□□ -0.33
SCAMP2-212ENST00000569904 PLD4Q96BZ4 506 aa12.98□□□□□ -0.33
SCAMP2-212ENST00000569904 PIWIL1Q96J94 861 aaKnown RBP12.98□□□□□ -0.33
SCAMP2-212ENST00000569904 CEP63Q96MT8 703 aa12.98□□□□□ -0.33
SCAMP2-212ENST00000569904 SLC2A11Q9BYW1 496 aa12.98□□□□□ -0.33
SCAMP2-212ENST00000569904 METTL14Q9HCE5 456 aaKnown RBP12.98□□□□□ -0.33
SCAMP2-212ENST00000569904 OLA1Q9NTK5 396 aaKnown RBP12.98□□□□□ -0.33
SCAMP2-212ENST00000569904 ARMCX3Q9UH62 379 aaPredicted RBP12.98□□□□□ -0.33
SCAMP2-212ENST00000569904 RASAL2Q9UJF2 1139 aa12.98□□□□□ -0.33
SCAMP2-212ENST00000569904 STRIP2Q9ULQ0 834 aa12.98□□□□□ -0.33
SCAMP2-212ENST00000569904 WASF3Q9UPY6 502 aa12.98□□□□□ -0.33
SCAMP2-212ENST00000569904 ASCC3Q8N3C0 2202 aaKnown RBP12.97□□□□□ -0.33
SCAMP2-212ENST00000569904 CHD8Q9HCK8 2581 aa12.97□□□□□ -0.33
SCAMP2-212ENST00000569904 UPK3BL1B0FP48 263 aa12.97□□□□□ -0.33
SCAMP2-212ENST00000569904 UPK3BL2E5RIL1 263 aa12.97□□□□□ -0.33
SCAMP2-212ENST00000569904 TULP2O00295 520 aa12.97□□□□□ -0.33
SCAMP2-212ENST00000569904 O00370 1275 aa12.97□□□□□ -0.33
SCAMP2-212ENST00000569904 MAP3K13O43283 966 aa12.97□□□□□ -0.33
SCAMP2-212ENST00000569904 LATS1O95835 1130 aa12.97□□□□□ -0.33
SCAMP2-212ENST00000569904 PAEPP09466 180 aa12.97□□□□□ -0.33
SCAMP2-212ENST00000569904 SETSIPP0DME0 302 aa12.97□□□□□ -0.33
SCAMP2-212ENST00000569904 VDRP11473 427 aa12.97□□□□□ -0.33
SCAMP2-212ENST00000569904 CEACAM1P13688 526 aa12.97□□□□□ -0.33
SCAMP2-212ENST00000569904 FMO5P49326 533 aa12.97□□□□□ -0.33
SCAMP2-212ENST00000569904 EFEMP1Q12805 493 aa12.97□□□□□ -0.33
SCAMP2-212ENST00000569904 EIF4HQ15056 248 aaKnown RBP12.97□□□□□ -0.33
SCAMP2-212ENST00000569904 E2F5Q15329 346 aa12.97□□□□□ -0.33
SCAMP2-212ENST00000569904 SGO2Q562F6 1265 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms