RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 ZNF217O75362 1048 aa12.71□□□□□ -0.37
CAPN3-220ENST00000569827 STC2O76061 302 aa12.71□□□□□ -0.37
CAPN3-220ENST00000569827 KLKB1P03952 638 aa12.71□□□□□ -0.37
CAPN3-220ENST00000569827 SYPP08247 313 aa12.71□□□□□ -0.37
CAPN3-220ENST00000569827 TRIM49P0CI25 452 aa12.71□□□□□ -0.37
CAPN3-220ENST00000569827 TRIM49CP0CI26 452 aa12.71□□□□□ -0.37
CAPN3-220ENST00000569827 CD58P19256 250 aa12.71□□□□□ -0.37
CAPN3-220ENST00000569827 IL12RB1P42701 662 aa12.71□□□□□ -0.37
CAPN3-220ENST00000569827 C1orf220Q5T0J3 134 aa12.71□□□□□ -0.37
CAPN3-220ENST00000569827 CEP135Q66GS9 1140 aa12.71□□□□□ -0.37
CAPN3-220ENST00000569827 Q6ZNB5 142 aa12.71□□□□□ -0.37
CAPN3-220ENST00000569827 NUDT18Q6ZVK8 323 aa12.71□□□□□ -0.37
CAPN3-220ENST00000569827 SCD5Q86SK9 330 aa12.71□□□□□ -0.37
CAPN3-220ENST00000569827 SLCO6A1Q86UG4 719 aa12.71□□□□□ -0.37
CAPN3-220ENST00000569827 FAM124AQ86V42 546 aa12.71□□□□□ -0.37
CAPN3-220ENST00000569827 MDM1Q8TC05 714 aa12.71□□□□□ -0.37
CAPN3-220ENST00000569827 KCNV2Q8TDN2 545 aa12.71□□□□□ -0.37
CAPN3-220ENST00000569827 SORCS1Q8WY21 1168 aa12.71□□□□□ -0.37
CAPN3-220ENST00000569827 ZNF419Q96HQ0 510 aaPredicted RBP12.71□□□□□ -0.37
CAPN3-220ENST00000569827 FBXO44Q9H4M3 255 aa12.71□□□□□ -0.37
CAPN3-220ENST00000569827 APOBEC3GQ9HC16 384 aaKnown RBP12.71□□□□□ -0.37
CAPN3-220ENST00000569827 CSNK1G1Q9HCP0 422 aa12.71□□□□□ -0.37
CAPN3-220ENST00000569827 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.71□□□□□ -0.37
CAPN3-220ENST00000569827 MARK1Q9P0L2 795 aa12.71□□□□□ -0.37
CAPN3-220ENST00000569827 WDR35Q9P2L0 1181 aa12.71□□□□□ -0.37
CAPN3-220ENST00000569827 SERTAD1Q9UHV2 236 aa12.71□□□□□ -0.37
CAPN3-220ENST00000569827 RASAL2Q9UJF2 1139 aa12.71□□□□□ -0.37
CAPN3-220ENST00000569827 SCML2Q9UQR0 700 aa12.71□□□□□ -0.37
CAPN3-220ENST00000569827 PCDHB9Q9Y5E1 797 aa12.71□□□□□ -0.37
CAPN3-220ENST00000569827 TDRD6O60522 2096 aaKnown RBP12.7□□□□□ -0.38
CAPN3-220ENST00000569827 GOLGA8CPA6NN73 597 aa12.7□□□□□ -0.38
CAPN3-220ENST00000569827 ASS1P00966 412 aaKnown RBP12.7□□□□□ -0.38
CAPN3-220ENST00000569827 NCAM1P13591 858 aa12.7□□□□□ -0.38
CAPN3-220ENST00000569827 PRKCHP24723 683 aa12.7□□□□□ -0.38
CAPN3-220ENST00000569827 CD6P30203 668 aa12.7□□□□□ -0.38
CAPN3-220ENST00000569827 MFAP3P55082 362 aa12.7□□□□□ -0.38
CAPN3-220ENST00000569827 SNRPFP62306 86 aaKnown RBP12.7□□□□□ -0.38
CAPN3-220ENST00000569827 BNC1Q01954 994 aa12.7□□□□□ -0.38
CAPN3-220ENST00000569827 EFEMP1Q12805 493 aa12.7□□□□□ -0.38
CAPN3-220ENST00000569827 ZACNQ401N2 412 aa12.7□□□□□ -0.38
CAPN3-220ENST00000569827 PREPLQ4J6C6 727 aaPredicted RBP12.7□□□□□ -0.38
CAPN3-220ENST00000569827 ZNF394Q53GI3 561 aa12.7□□□□□ -0.38
CAPN3-220ENST00000569827 DCAF12L1Q5VU92 463 aa12.7□□□□□ -0.38
CAPN3-220ENST00000569827 SV2AQ7L0J3 742 aa12.7□□□□□ -0.38
CAPN3-220ENST00000569827 PROSER1Q86XN7 944 aa12.7□□□□□ -0.38
CAPN3-220ENST00000569827 CRYBG2Q8N1P7 616 aa12.7□□□□□ -0.38
CAPN3-220ENST00000569827 ZNF366Q8N895 744 aa12.7□□□□□ -0.38
CAPN3-220ENST00000569827 CYFIP2Q96F07 1278 aa12.7□□□□□ -0.38
CAPN3-220ENST00000569827 ZNF396Q96N95 335 aaPredicted RBP12.7□□□□□ -0.38
CAPN3-220ENST00000569827 PRDM16Q9HAZ2 1276 aa12.7□□□□□ -0.38
CAPN3-220ENST00000569827 COMMD8Q9NX08 183 aa12.7□□□□□ -0.38
CAPN3-220ENST00000569827 PCDHA7Q9UN72 937 aa12.7□□□□□ -0.38
CAPN3-220ENST00000569827 FNDC3AQ9Y2H6 1198 aaKnown RBP12.7□□□□□ -0.38
CAPN3-220ENST00000569827 YEATS4O95619 227 aa12.69□□□□□ -0.38
CAPN3-220ENST00000569827 NR3C1P04150 777 aa12.69□□□□□ -0.38
CAPN3-220ENST00000569827 CAPNS1P04632 268 aa12.69□□□□□ -0.38
CAPN3-220ENST00000569827 HLA-EP13747 358 aa12.69□□□□□ -0.38
CAPN3-220ENST00000569827 GCLMP48507 274 aa12.69□□□□□ -0.38
CAPN3-220ENST00000569827 CLDN10P78369 228 aa12.69□□□□□ -0.38
CAPN3-220ENST00000569827 GOLGA8FQ08AF8 430 aa12.69□□□□□ -0.38
CAPN3-220ENST00000569827 GOLGA8DPQ0D2H9 430 aa12.69□□□□□ -0.38
CAPN3-220ENST00000569827 STARD3Q14849 445 aa12.69□□□□□ -0.38
CAPN3-220ENST00000569827 ZNF423Q2M1K9 1284 aa12.69□□□□□ -0.38
CAPN3-220ENST00000569827 SGSM1Q2NKQ1 1148 aa12.69□□□□□ -0.38
CAPN3-220ENST00000569827 COL28A1Q2UY09 1125 aa12.69□□□□□ -0.38
CAPN3-220ENST00000569827 KMT5BQ4FZB7 885 aa12.69□□□□□ -0.38
CAPN3-220ENST00000569827 SYCP2LQ5T4T6 812 aa12.69□□□□□ -0.38
CAPN3-220ENST00000569827 FYB2Q5VWT5 728 aa12.69□□□□□ -0.38
CAPN3-220ENST00000569827 LAYNQ6UX15 382 aa12.69□□□□□ -0.38
CAPN3-220ENST00000569827 RABEPKQ7Z6M1 372 aa12.69□□□□□ -0.38
CAPN3-220ENST00000569827 TAS1R2Q8TE23 839 aa12.69□□□□□ -0.38
CAPN3-220ENST00000569827 SETD7Q8WTS6 366 aaKnown RBP12.69□□□□□ -0.38
CAPN3-220ENST00000569827 SNX19Q92543 992 aa12.69□□□□□ -0.38
CAPN3-220ENST00000569827 NDRG1Q92597 394 aaKnown RBP12.69□□□□□ -0.38
CAPN3-220ENST00000569827 DUSP9Q99956 384 aaKnown RBP12.69□□□□□ -0.38
CAPN3-220ENST00000569827 KCTD10Q9H3F6 313 aa12.69□□□□□ -0.38
CAPN3-220ENST00000569827 EXOC1Q9NV70 894 aa12.69□□□□□ -0.38
CAPN3-220ENST00000569827 DMAC2Q9NW81 257 aa12.69□□□□□ -0.38
CAPN3-220ENST00000569827 WSB2Q9NYS7 404 aaPredicted RBP12.69□□□□□ -0.38
CAPN3-220ENST00000569827 EIF2B4Q9UI10 523 aaKnown RBP12.69□□□□□ -0.38
CAPN3-220ENST00000569827 DNMT3LQ9UJW3 386 aa12.69□□□□□ -0.38
CAPN3-220ENST00000569827 H0Y626 953 aa12.68□□□□□ -0.38
CAPN3-220ENST00000569827 K7ELQ4 463 aaPredicted RBP12.68□□□□□ -0.38
CAPN3-220ENST00000569827 TRIM16O95361 564 aa12.68□□□□□ -0.38
CAPN3-220ENST00000569827 P4HA1P13674 534 aa12.68□□□□□ -0.38
CAPN3-220ENST00000569827 GNSP15586 552 aa12.68□□□□□ -0.38
CAPN3-220ENST00000569827 CORO1AP31146 461 aaKnown RBP12.68□□□□□ -0.38
CAPN3-220ENST00000569827 PLA2G4AP47712 749 aa12.68□□□□□ -0.38
CAPN3-220ENST00000569827 ME1P48163 572 aa12.68□□□□□ -0.38
CAPN3-220ENST00000569827 TPMTP51580 245 aa12.68□□□□□ -0.38
CAPN3-220ENST00000569827 KIF11P52732 1056 aa12.68□□□□□ -0.38
CAPN3-220ENST00000569827 AP3M2P53677 418 aa12.68□□□□□ -0.38
CAPN3-220ENST00000569827 ZNF234Q14588 700 aa12.68□□□□□ -0.38
CAPN3-220ENST00000569827 ACAP1Q15027 740 aa12.68□□□□□ -0.38
CAPN3-220ENST00000569827 CCDC157Q569K6 752 aa12.68□□□□□ -0.38
CAPN3-220ENST00000569827 WDR45BQ5MNZ6 344 aa12.68□□□□□ -0.38
CAPN3-220ENST00000569827 PPP1R26Q5T8A7 1209 aaPredicted RBP12.68□□□□□ -0.38
CAPN3-220ENST00000569827 RESP18Q5W5W9 173 aa12.68□□□□□ -0.38
CAPN3-220ENST00000569827 TMPRSS6Q8IU80 811 aa12.68□□□□□ -0.38
CAPN3-220ENST00000569827 DENND1CQ8IV53 801 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms