RNA–Protein interactions for RNA: ENST00000569801.5

SNX29-208, Transcript of sorting nexin 29, humanhuman

TSL 4

Gene SNX29, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-208ENST00000569801 ATL3Q6DD88 541 aa8.8□□□□□ -1
SNX29-208ENST00000569801 SYT13Q7L8C5 426 aa8.8□□□□□ -1
SNX29-208ENST00000569801 DPH6Q7L8W6 267 aa8.8□□□□□ -1
SNX29-208ENST00000569801 TRAPPC11Q7Z392 1133 aa8.8□□□□□ -1
SNX29-208ENST00000569801 SPATA2LQ8IUW3 424 aaPredicted RBP8.8□□□□□ -1
SNX29-208ENST00000569801 C12orf56Q8IXR9 622 aa8.8□□□□□ -1
SNX29-208ENST00000569801 FRMD1Q8N878 549 aa8.8□□□□□ -1
SNX29-208ENST00000569801 XXYLT1Q8NBI6 393 aa8.8□□□□□ -1
SNX29-208ENST00000569801 USP13Q92995 863 aaPredicted RBP8.8□□□□□ -1
SNX29-208ENST00000569801 MYLPFQ96A32 169 aa8.8□□□□□ -1
SNX29-208ENST00000569801 TRMT2BQ96GJ1 504 aaKnown RBP8.8□□□□□ -1
SNX29-208ENST00000569801 FUBP3Q96I24 572 aaKnown RBP eCLIP8.8□□□□□ -1
SNX29-208ENST00000569801 MYRFLQ96LU7 910 aa8.8□□□□□ -1
SNX29-208ENST00000569801 CGRRF1Q99675 332 aa8.8□□□□□ -1
SNX29-208ENST00000569801 FAM83CQ9BQN1 747 aa8.8□□□□□ -1
SNX29-208ENST00000569801 MRPL45Q9BRJ2 306 aaKnown RBP8.8□□□□□ -1
SNX29-208ENST00000569801 UNKQ9C0B0 810 aaKnown RBP8.8□□□□□ -1
SNX29-208ENST00000569801 CRTAC1Q9NQ79 661 aa8.8□□□□□ -1
SNX29-208ENST00000569801 SERTAD1Q9UHV2 236 aa8.8□□□□□ -1
SNX29-208ENST00000569801 ZMYM5Q9UJ78 669 aa8.8□□□□□ -1
SNX29-208ENST00000569801 CFAP45Q9UL16 551 aa8.8□□□□□ -1
SNX29-208ENST00000569801 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.8□□□□□ -1
SNX29-208ENST00000569801 R3HCC1Q9Y3T6 440 aaKnown RBP8.8□□□□□ -1
SNX29-208ENST00000569801 ARHGEF17Q96PE2 2063 aaPredicted RBP8.8□□□□□ -1
SNX29-208ENST00000569801 RP1L1Q8IWN7 2480 aaPredicted RBP8.8□□□□□ -1
SNX29-208ENST00000569801 RTTNQ86VV8 2226 aa8.8□□□□□ -1
SNX29-208ENST00000569801 BSNQ9UPA5 3926 aa8.79□□□□□ -1
SNX29-208ENST00000569801 ACTN4O43707 911 aaKnown RBP8.79□□□□□ -1
SNX29-208ENST00000569801 SIX3O95343 332 aaPredicted RBP8.79□□□□□ -1
SNX29-208ENST00000569801 DDAH2O95865 285 aa8.79□□□□□ -1
SNX29-208ENST00000569801 TNNI1P19237 187 aa8.79□□□□□ -1
SNX29-208ENST00000569801 AVPR1AP37288 418 aa8.79□□□□□ -1
SNX29-208ENST00000569801 MAGEA11P43364 429 aa8.79□□□□□ -1
SNX29-208ENST00000569801 UQCRFS1P47985 274 aa8.79□□□□□ -1
SNX29-208ENST00000569801 CD97P48960 835 aa8.79□□□□□ -1
SNX29-208ENST00000569801 CASP4P49662 377 aa8.79□□□□□ -1
SNX29-208ENST00000569801 STK4Q13043 487 aa8.79□□□□□ -1
SNX29-208ENST00000569801 KNOP1Q1ED39 458 aaKnown RBP8.79□□□□□ -1
SNX29-208ENST00000569801 TRIM68Q6AZZ1 485 aa8.79□□□□□ -1
SNX29-208ENST00000569801 HS2ST1Q7LGA3 356 aa8.79□□□□□ -1
SNX29-208ENST00000569801 MON1AQ86VX9 555 aa8.79□□□□□ -1
SNX29-208ENST00000569801 C12orf40Q86WS4 652 aa8.79□□□□□ -1
SNX29-208ENST00000569801 SCN4BQ8IWT1 228 aa8.79□□□□□ -1
SNX29-208ENST00000569801 SLC34A3Q8N130 599 aa8.79□□□□□ -1
SNX29-208ENST00000569801 KIAA0895Q8NCT3 520 aa8.79□□□□□ -1
SNX29-208ENST00000569801 TSTD1Q8NFU3 115 aa8.79□□□□□ -1
SNX29-208ENST00000569801 PLEKHO2Q8TD55 490 aa8.79□□□□□ -1
SNX29-208ENST00000569801 ZNF516Q92618 1163 aa8.79□□□□□ -1
SNX29-208ENST00000569801 MRPS31Q92665 395 aaKnown RBP8.79□□□□□ -1
SNX29-208ENST00000569801 CHFRQ96EP1 664 aa8.79□□□□□ -1
SNX29-208ENST00000569801 PAGE5Q96GU1 130 aa8.79□□□□□ -1
SNX29-208ENST00000569801 ZNF578Q96N58 590 aaPredicted RBP8.79□□□□□ -1
SNX29-208ENST00000569801 SLC22A12Q96S37 553 aa8.79□□□□□ -1
SNX29-208ENST00000569801 MMS19Q96T76 1030 aa8.79□□□□□ -1
SNX29-208ENST00000569801 IL21RQ9HBE5 538 aa8.79□□□□□ -1
SNX29-208ENST00000569801 HPS4Q9NQG7 708 aa8.79□□□□□ -1
SNX29-208ENST00000569801 CDH9Q9ULB4 789 aa8.79□□□□□ -1
SNX29-208ENST00000569801 BTBD3Q9Y2F9 522 aa8.79□□□□□ -1
SNX29-208ENST00000569801 ZDHHC9Q9Y397 364 aa8.79□□□□□ -1
SNX29-208ENST00000569801 NBEAL2Q6ZNJ1 2754 aa8.79□□□□□ -1
SNX29-208ENST00000569801 THADAQ6YHU6 1953 aa8.79□□□□□ -1
SNX29-208ENST00000569801 MYO16Q9Y6X6 1858 aa8.79□□□□□ -1
SNX29-208ENST00000569801 KIAA1549LQ6ZVL6 1849 aa8.78□□□□□ -1
SNX29-208ENST00000569801 A0A1B0GVL5 298 aa8.78□□□□□ -1
SNX29-208ENST00000569801 OTOL1A6NHN0 477 aaPredicted RBP8.78□□□□□ -1
SNX29-208ENST00000569801 FLRT2O43155 660 aa8.78□□□□□ -1
SNX29-208ENST00000569801 HNRNPRO43390 633 aaKnown RBP8.78□□□□□ -1
SNX29-208ENST00000569801 EXOC3O60645 756 aa8.78□□□□□ -1
SNX29-208ENST00000569801 TACC1O75410 805 aa8.78□□□□□ -1
SNX29-208ENST00000569801 STAU1O95793 577 aaKnown RBP8.78□□□□□ -1
SNX29-208ENST00000569801 PDGFRBP09619 1106 aa8.78□□□□□ -1
SNX29-208ENST00000569801 SLFN14P0C7P3 912 aa8.78□□□□□ -1
SNX29-208ENST00000569801 PFKFB1P16118 471 aa8.78□□□□□ -1
SNX29-208ENST00000569801 USP46P62068 366 aa8.78□□□□□ -1
SNX29-208ENST00000569801 RUNX3Q13761 415 aa8.78□□□□□ -1
SNX29-208ENST00000569801 ZNF268Q14587 947 aaPredicted RBP8.78□□□□□ -1
SNX29-208ENST00000569801 PLEKHG6Q3KR16 790 aa8.78□□□□□ -1
SNX29-208ENST00000569801 ITPRIPL2Q3MIP1 535 aa8.78□□□□□ -1
SNX29-208ENST00000569801 ARL13BQ3SXY8 428 aa8.78□□□□□ -1
SNX29-208ENST00000569801 KMT5BQ4FZB7 885 aa8.78□□□□□ -1
SNX29-208ENST00000569801 SPDYCQ5MJ68 293 aa8.78□□□□□ -1
SNX29-208ENST00000569801 ANO7Q6IWH7 933 aa8.78□□□□□ -1
SNX29-208ENST00000569801 FSTL4Q6MZW2 842 aa8.78□□□□□ -1
SNX29-208ENST00000569801 C4orf50Q6ZRC1 276 aa8.78□□□□□ -1
SNX29-208ENST00000569801 CEP57L1Q8IYX8 460 aa8.78□□□□□ -1
SNX29-208ENST00000569801 DEFB119Q8N690 84 aa8.78□□□□□ -1
SNX29-208ENST00000569801 OR6B3Q8NGW1 331 aa8.78□□□□□ -1
SNX29-208ENST00000569801 MYCBPAPQ8TBZ2 947 aa8.78□□□□□ -1
SNX29-208ENST00000569801 PCED1BQ96HM7 432 aa8.78□□□□□ -1
SNX29-208ENST00000569801 XYLT2Q9H1B5 865 aa8.78□□□□□ -1
SNX29-208ENST00000569801 DPEP3Q9H4B8 488 aa8.78□□□□□ -1
SNX29-208ENST00000569801 EBF3Q9H4W6 596 aa8.78□□□□□ -1
SNX29-208ENST00000569801 KIF9Q9HAQ2 790 aa8.78□□□□□ -1
SNX29-208ENST00000569801 TRPC7Q9HCX4 862 aa8.78□□□□□ -1
SNX29-208ENST00000569801 GKN1Q9NS71 199 aa8.78□□□□□ -1
SNX29-208ENST00000569801 TDP1Q9NUW8 608 aa8.78□□□□□ -1
SNX29-208ENST00000569801 THG1LQ9NWX6 298 aaKnown RBP8.78□□□□□ -1
SNX29-208ENST00000569801 CGNQ9P2M7 1197 aaKnown RBP8.78□□□□□ -1
SNX29-208ENST00000569801 MAGEC2Q9UBF1 373 aaPredicted RBP8.78□□□□□ -1
SNX29-208ENST00000569801 UXTQ9UBK9 157 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms