RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 CSTF3Q12996 717 aaKnown RBP6.91□□□□□ -1.3
SMG1-217ENST00000569764 ZNF321PQ8N8H1 164 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 DIS3LQ8TF46 1054 aaKnown RBP6.91□□□□□ -1.3
SMG1-217ENST00000569764 NR1H4Q96RI1 486 aaPredicted RBP6.91□□□□□ -1.3
SMG1-217ENST00000569764 TAAR1Q96RJ0 339 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 UPF3AQ9H1J1 476 aaKnown RBP6.91□□□□□ -1.3
SMG1-217ENST00000569764 TMEM60Q9H2L4 133 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 ATP13A3Q9H7F0 1226 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 TMEM161AQ9NX61 479 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 ADGRE2Q9UHX3 823 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 BRCA1P38398 1863 aaKnown RBP6.91□□□□□ -1.3
SMG1-217ENST00000569764 FER1L6Q2WGJ9 1857 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 NFASCO94856 1347 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.91□□□□□ -1.3
SMG1-217ENST00000569764 NCF1BA6NI72 391 aaPredicted RBP6.91□□□□□ -1.3
SMG1-217ENST00000569764 PP2D1A8MPX8 630 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 NCF1CA8MVU1 366 aaPredicted RBP6.91□□□□□ -1.3
SMG1-217ENST00000569764 APOL1O14791 398 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 ASGR2P07307 311 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 TFEBP19484 476 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 GJA5P36382 358 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 PNPLA4P41247 253 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 RALGDSQ12967 914 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 GRIK3Q13003 919 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 COTL1Q14019 142 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 ABRAXAS1Q6UWZ7 409 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 PIK3AP1Q6ZUJ8 805 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 TRMT11Q7Z4G4 463 aaKnown RBP6.91□□□□□ -1.3
SMG1-217ENST00000569764 ARHGAP22Q7Z5H3 698 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 SLC22A9Q8IVM8 553 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 TMEM192Q8IY95 271 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 FBXO30Q8TB52 745 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 HSPH1Q92598 858 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 ANKRD36BP1Q96IX9 119 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 GDAP1L1Q96MZ0 367 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 C19orf43Q9BQ61 176 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 SNX25Q9H3E2 840 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 PLEKHA4Q9H4M7 779 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 OSGEPQ9NPF4 335 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 TTC34A8MYJ7 566 aa6.9□□□□□ -1.3
SMG1-217ENST00000569764 MASP2O00187 686 aa6.9□□□□□ -1.3
SMG1-217ENST00000569764 AP1G1O43747 822 aa6.9□□□□□ -1.3
SMG1-217ENST00000569764 ABLIM3O94929 683 aa6.9□□□□□ -1.3
SMG1-217ENST00000569764 KRT1P04264 644 aa6.9□□□□□ -1.3
SMG1-217ENST00000569764 GLAP06280 429 aa6.9□□□□□ -1.3
SMG1-217ENST00000569764 S100A9P06702 114 aaKnown RBP6.9□□□□□ -1.3
SMG1-217ENST00000569764 SOX6P35712 828 aa6.9□□□□□ -1.3
SMG1-217ENST00000569764 LONP1P36776 959 aaKnown RBP6.9□□□□□ -1.3
SMG1-217ENST00000569764 DDR2Q16832 855 aa6.9□□□□□ -1.3
SMG1-217ENST00000569764 PAN2Q504Q3 1202 aaKnown RBP6.9□□□□□ -1.3
SMG1-217ENST00000569764 VSIG10LQ86VR7 867 aa6.9□□□□□ -1.3
SMG1-217ENST00000569764 AFAP1L2Q8N4X5 818 aa6.9□□□□□ -1.3
SMG1-217ENST00000569764 P2RX5Q93086 422 aa6.9□□□□□ -1.3
SMG1-217ENST00000569764 TUBGCP3Q96CW5 907 aa6.9□□□□□ -1.3
SMG1-217ENST00000569764 PPP1R36Q96LQ0 422 aa6.9□□□□□ -1.3
SMG1-217ENST00000569764 SEMA3GQ9NS98 782 aa6.9□□□□□ -1.3
SMG1-217ENST00000569764 RHBDL2Q9NX52 303 aa6.9□□□□□ -1.3
SMG1-217ENST00000569764 GJD2Q9UKL4 321 aa6.9□□□□□ -1.3
SMG1-217ENST00000569764 PCDHA4Q9UN74 947 aa6.9□□□□□ -1.3
SMG1-217ENST00000569764 KIF13BQ9NQT8 1826 aa6.9□□□□□ -1.3
SMG1-217ENST00000569764 SF3B1O75533 1304 aaKnown RBP eCLIP6.9□□□□□ -1.34e-7■■■■■ 133.7
SMG1-217ENST00000569764 POLR2DO15514 142 aaKnown RBP6.9□□□□□ -1.3
SMG1-217ENST00000569764 DDX3YO15523 660 aaKnown RBP6.9□□□□□ -1.3
SMG1-217ENST00000569764 ACTN4O43707 911 aaKnown RBP6.9□□□□□ -1.3
SMG1-217ENST00000569764 SMIM10L2AP0DMW4 78 aa6.9□□□□□ -1.3
SMG1-217ENST00000569764 SMIM10L2BP0DMW5 78 aa6.9□□□□□ -1.3
SMG1-217ENST00000569764 TROVE2P10155 538 aaKnown RBP eCLIP6.9□□□□□ -1.3
SMG1-217ENST00000569764 POU2F1P14859 743 aa6.9□□□□□ -1.3
SMG1-217ENST00000569764 PAMP19021 973 aa6.9□□□□□ -1.3
SMG1-217ENST00000569764 PCSK1P29120 753 aa6.9□□□□□ -1.3
SMG1-217ENST00000569764 GPR85P60893 370 aa6.9□□□□□ -1.3
SMG1-217ENST00000569764 NOP14P78316 857 aaKnown RBP6.9□□□□□ -1.3
SMG1-217ENST00000569764 CCL14Q16627 93 aa6.9□□□□□ -1.3
SMG1-217ENST00000569764 SWI5Q1ZZU3 235 aa6.9□□□□□ -1.3
SMG1-217ENST00000569764 USP41Q3LFD5 358 aa6.9□□□□□ -1.3
SMG1-217ENST00000569764 MAMDC2Q7Z304 686 aaPredicted RBP6.9□□□□□ -1.3
SMG1-217ENST00000569764 AOPEPQ8N6M6 819 aa6.9□□□□□ -1.3
SMG1-217ENST00000569764 ANKRD53Q8N9V6 530 aa6.9□□□□□ -1.3
SMG1-217ENST00000569764 KCTD6Q8NC69 237 aa6.9□□□□□ -1.3
SMG1-217ENST00000569764 DHRS4Q9BTZ2 278 aa6.9□□□□□ -1.3
SMG1-217ENST00000569764 RBCK1Q9BYM8 510 aa6.9□□□□□ -1.3
SMG1-217ENST00000569764 FAM107BQ9H098 131 aa6.9□□□□□ -1.3
SMG1-217ENST00000569764 CARD9Q9H257 536 aa6.9□□□□□ -1.3
SMG1-217ENST00000569764 C17orf75Q9HAS0 396 aa6.9□□□□□ -1.3
SMG1-217ENST00000569764 HECAQ9UBI9 543 aaPredicted RBP6.9□□□□□ -1.3
SMG1-217ENST00000569764 SERTAD1Q9UHV2 236 aa6.9□□□□□ -1.3
SMG1-217ENST00000569764 PCDHA5Q9Y5H7 936 aa6.9□□□□□ -1.3
SMG1-217ENST00000569764 CDY2AQ9Y6F7 541 aa6.9□□□□□ -1.3
SMG1-217ENST00000569764 K7EPI3 171 aa6.9□□□□□ -1.31
SMG1-217ENST00000569764 FSBPO95073 299 aa6.9□□□□□ -1.31
SMG1-217ENST00000569764 MOCS3O95396 460 aa6.9□□□□□ -1.31
SMG1-217ENST00000569764 HOXA13P31271 388 aaPredicted RBP6.9□□□□□ -1.31
SMG1-217ENST00000569764 ETV3P41162 512 aa6.9□□□□□ -1.31
SMG1-217ENST00000569764 STARD3Q14849 445 aa6.9□□□□□ -1.31
SMG1-217ENST00000569764 KIAA1755Q5JYT7 1200 aa6.9□□□□□ -1.31
SMG1-217ENST00000569764 SV2BQ7L1I2 683 aa6.9□□□□□ -1.31
SMG1-217ENST00000569764 LIX1LQ8IVB5 337 aa6.9□□□□□ -1.31
SMG1-217ENST00000569764 PPP1R35Q8TAP8 253 aa6.9□□□□□ -1.31
SMG1-217ENST00000569764 SMARCE1Q969G3 411 aa6.9□□□□□ -1.31
SMG1-217ENST00000569764 ACDQ96AP0 544 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms