RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 MTMR3Q13615 1198 aa23.41■■□□□ 1.34
VCPKMT-205ENST00000569518 NECAB2Q7Z6G3 386 aa23.41■■□□□ 1.34
VCPKMT-205ENST00000569518 SCN4BQ8IWT1 228 aa23.41■■□□□ 1.34
VCPKMT-205ENST00000569518 BBOF1Q8ND07 529 aa23.41■■□□□ 1.34
VCPKMT-205ENST00000569518 ZNF689Q96CS4 500 aaPredicted RBP23.41■■□□□ 1.34
VCPKMT-205ENST00000569518 SH3GL2Q99962 352 aa23.41■■□□□ 1.34
VCPKMT-205ENST00000569518 OXCT2Q9BYC2 517 aaPredicted RBP23.41■■□□□ 1.34
VCPKMT-205ENST00000569518 TMPRSS4Q9NRS4 437 aa23.41■■□□□ 1.34
VCPKMT-205ENST00000569518 COX16Q9P0S2 106 aa23.41■■□□□ 1.34
VCPKMT-205ENST00000569518 H7C4K7 107 aa23.4■■□□□ 1.34
VCPKMT-205ENST00000569518 I6L893 689 aaPredicted RBP23.4■■□□□ 1.34
VCPKMT-205ENST00000569518 SGK1O00141 431 aa23.4■■□□□ 1.34
VCPKMT-205ENST00000569518 VNN2O95498 520 aa23.4■■□□□ 1.34
VCPKMT-205ENST00000569518 ZSCAN5DPP0CG00 497 aa23.4■■□□□ 1.34
VCPKMT-205ENST00000569518 RBP3P10745 1247 aa23.4■■□□□ 1.34
VCPKMT-205ENST00000569518 ETS1P14921 441 aa23.4■■□□□ 1.34
VCPKMT-205ENST00000569518 CSF2RAP15509 400 aa23.4■■□□□ 1.34
VCPKMT-205ENST00000569518 ADRA1BP35368 520 aa23.4■■□□□ 1.34
VCPKMT-205ENST00000569518 ALDH7A1P49419 539 aaKnown RBP23.4■■□□□ 1.34
VCPKMT-205ENST00000569518 GDF10P55107 478 aa23.4■■□□□ 1.34
VCPKMT-205ENST00000569518 GPR17Q13304 367 aa23.4■■□□□ 1.34
VCPKMT-205ENST00000569518 ANKS3Q6ZW76 656 aa23.4■■□□□ 1.34
VCPKMT-205ENST00000569518 TTC9BQ8N6N2 239 aa23.4■■□□□ 1.34
VCPKMT-205ENST00000569518 ATAD1Q8NBU5 361 aa23.4■■□□□ 1.34
VCPKMT-205ENST00000569518 PGLYRP2Q96PD5 576 aa23.4■■□□□ 1.34
VCPKMT-205ENST00000569518 VN1R3Q9BXE9 311 aa23.4■■□□□ 1.34
VCPKMT-205ENST00000569518 ADAM7Q9H2U9 754 aa23.4■■□□□ 1.34
VCPKMT-205ENST00000569518 C10orf88Q9H8K7 445 aa23.4■■□□□ 1.34
VCPKMT-205ENST00000569518 AAASQ9NRG9 546 aa23.4■■□□□ 1.34
VCPKMT-205ENST00000569518 DDIT4Q9NX09 232 aa23.4■■□□□ 1.34
VCPKMT-205ENST00000569518 FBXW11Q9UKB1 542 aa23.4■■□□□ 1.34
VCPKMT-205ENST00000569518 F9P00740 461 aa23.4■■□□□ 1.34
VCPKMT-205ENST00000569518 IGLV3-25P01717 112 aa23.4■■□□□ 1.34
VCPKMT-205ENST00000569518 CXCR3P49682 368 aa23.4■■□□□ 1.34
VCPKMT-205ENST00000569518 GPR15P49685 360 aa23.4■■□□□ 1.34
VCPKMT-205ENST00000569518 YWHAGP61981 247 aaKnown RBP eCLIP23.4■■□□□ 1.34
VCPKMT-205ENST00000569518 P3H1Q32P28 736 aa23.4■■□□□ 1.34
VCPKMT-205ENST00000569518 C1orf228Q6PIY5 440 aa23.4■■□□□ 1.34
VCPKMT-205ENST00000569518 SCD5Q86SK9 330 aa23.4■■□□□ 1.34
VCPKMT-205ENST00000569518 TAC4Q86UU9 113 aa23.4■■□□□ 1.34
VCPKMT-205ENST00000569518 EPB41L4BQ9H329 900 aa23.4■■□□□ 1.34
VCPKMT-205ENST00000569518 FAM204AQ9H8W3 233 aa23.4■■□□□ 1.34
VCPKMT-205ENST00000569518 ANLNQ9NQW6 1124 aa23.4■■□□□ 1.34
VCPKMT-205ENST00000569518 ATP8A1Q9Y2Q0 1164 aa23.4■■□□□ 1.34
VCPKMT-205ENST00000569518 MTMR11A4FU01 709 aa23.39■■□□□ 1.33
VCPKMT-205ENST00000569518 GOT1P17174 413 aa23.39■■□□□ 1.33
VCPKMT-205ENST00000569518 CAPN2P17655 700 aa23.39■■□□□ 1.33
VCPKMT-205ENST00000569518 PGFP49763 221 aa23.39■■□□□ 1.33
VCPKMT-205ENST00000569518 FAM193AP78312 1265 aa23.39■■□□□ 1.33
VCPKMT-205ENST00000569518 DEFB103AP81534 67 aa23.39■■□□□ 1.33
VCPKMT-205ENST00000569518 EIF4EBP2Q13542 120 aaPredicted RBP23.39■■□□□ 1.33
VCPKMT-205ENST00000569518 DDR2Q16832 855 aa23.39■■□□□ 1.33
VCPKMT-205ENST00000569518 IZUMO3Q5VZ72 239 aa23.39■■□□□ 1.33
VCPKMT-205ENST00000569518 HIBCHQ6NVY1 386 aaPredicted RBP23.39■■□□□ 1.33
VCPKMT-205ENST00000569518 UNC45BQ8IWX7 931 aa23.39■■□□□ 1.33
VCPKMT-205ENST00000569518 DQX1Q8TE96 717 aaKnown RBP23.39■■□□□ 1.33
VCPKMT-205ENST00000569518 RIN2Q8WYP3 895 aaPredicted RBP23.39■■□□□ 1.33
VCPKMT-205ENST00000569518 IGSF21Q96ID5 467 aa23.39■■□□□ 1.33
VCPKMT-205ENST00000569518 PRDM5Q9NQX1 630 aaPredicted RBP23.39■■□□□ 1.33
VCPKMT-205ENST00000569518 IL37Q9NZH6 218 aa23.39■■□□□ 1.33
VCPKMT-205ENST00000569518 ANAPC5Q9UJX4 755 aa23.39■■□□□ 1.33
VCPKMT-205ENST00000569518 ZNF638Q14966 1978 aaKnown RBP23.39■■□□□ 1.33
VCPKMT-205ENST00000569518 H0YGN5 161 aa23.38■■□□□ 1.33
VCPKMT-205ENST00000569518 AMHP03971 560 aa23.38■■□□□ 1.33
VCPKMT-205ENST00000569518 CPB1P15086 417 aa23.38■■□□□ 1.33
VCPKMT-205ENST00000569518 ZFXP17010 805 aaPredicted RBP23.38■■□□□ 1.33
VCPKMT-205ENST00000569518 SMARCB1Q12824 385 aa23.38■■□□□ 1.33
VCPKMT-205ENST00000569518 SEMA3BQ13214 749 aa23.38■■□□□ 1.33
VCPKMT-205ENST00000569518 HSP90B2PQ58FF3 399 aa23.38■■□□□ 1.33
VCPKMT-205ENST00000569518 EFHC2Q5JST6 749 aa23.38■■□□□ 1.33
VCPKMT-205ENST00000569518 MFSD5Q6N075 450 aa23.38■■□□□ 1.33
VCPKMT-205ENST00000569518 NUP93Q8N1F7 819 aa23.38■■□□□ 1.33
VCPKMT-205ENST00000569518 RNF139Q8WU17 664 aa23.38■■□□□ 1.33
VCPKMT-205ENST00000569518 PRDM16Q9HAZ2 1276 aa23.38■■□□□ 1.33
VCPKMT-205ENST00000569518 ABCC13Q9NSE7 274 aa23.38■■□□□ 1.33
VCPKMT-205ENST00000569518 SCML2Q9UQR0 700 aa23.38■■□□□ 1.33
VCPKMT-205ENST00000569518 PLAAQ9Y263 795 aa23.38■■□□□ 1.33
VCPKMT-205ENST00000569518 NFS1Q9Y697 457 aa23.38■■□□□ 1.33
VCPKMT-205ENST00000569518 DNALI1O14645 258 aaPredicted RBP23.38■■□□□ 1.33
VCPKMT-205ENST00000569518 ARL4AP40617 200 aa23.38■■□□□ 1.33
VCPKMT-205ENST00000569518 CTCFP49711 727 aaPredicted RBP23.38■■□□□ 1.33
VCPKMT-205ENST00000569518 WDR5P61964 334 aaKnown RBP23.38■■□□□ 1.33
VCPKMT-205ENST00000569518 ROR1Q01973 937 aa23.38■■□□□ 1.33
VCPKMT-205ENST00000569518 GPS1Q13098 491 aa23.38■■□□□ 1.33
VCPKMT-205ENST00000569518 SDHAF4Q5VUM1 108 aa23.38■■□□□ 1.33
VCPKMT-205ENST00000569518 PRSS55Q6UWB4 352 aaPredicted RBP23.38■■□□□ 1.33
VCPKMT-205ENST00000569518 LRIG3Q6UXM1 1119 aa23.38■■□□□ 1.33
VCPKMT-205ENST00000569518 SPPL2BQ8TCT7 592 aa23.38■■□□□ 1.33
VCPKMT-205ENST00000569518 ARHGEF4Q9NR80 690 aa23.38■■□□□ 1.33
VCPKMT-205ENST00000569518 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.38■■□□□ 1.33
VCPKMT-205ENST00000569518 GREB1Q4ZG55 1949 aa23.37■■□□□ 1.33
VCPKMT-205ENST00000569518 EFCAB14O75071 495 aa23.37■■□□□ 1.33
VCPKMT-205ENST00000569518 IFNB1P01574 187 aa23.37■■□□□ 1.33
VCPKMT-205ENST00000569518 PMS2P54278 862 aa23.37■■□□□ 1.33
VCPKMT-205ENST00000569518 IFRD2Q12894 506 aaPredicted RBP23.37■■□□□ 1.33
VCPKMT-205ENST00000569518 SLMAPQ14BN4 828 aa23.37■■□□□ 1.33
VCPKMT-205ENST00000569518 NCBP2-AS2Q69YL0 99 aa23.37■■□□□ 1.33
VCPKMT-205ENST00000569518 RNF19BQ6ZMZ0 732 aa23.37■■□□□ 1.33
VCPKMT-205ENST00000569518 TMCO2Q7Z6W1 182 aaPredicted RBP23.37■■□□□ 1.33
VCPKMT-205ENST00000569518 ZC3H18Q86VM9 953 aaKnown RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms