RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	APIP	Q96GX9	242 aa		4.04	□□□□□ -1.76
UBR1-209	ENST00000569243	FAM227B	Q96M60	508 aa		4.04	□□□□□ -1.76
UBR1-209	ENST00000569243	STK31	Q9BXU1	1019 aa		4.04	□□□□□ -1.76
UBR1-209	ENST00000569243	RNF26	Q9BY78	433 aa	Predicted RBP	4.04	□□□□□ -1.76
UBR1-209	ENST00000569243	NUAK2	Q9H093	628 aa		4.04	□□□□□ -1.76
UBR1-209	ENST00000569243	FAM234A	Q9H0X4	552 aa		4.04	□□□□□ -1.76
UBR1-209	ENST00000569243	CHST8	Q9H2A9	424 aa		4.04	□□□□□ -1.76
UBR1-209	ENST00000569243	TMEM8A	Q9HCN3	771 aa		4.04	□□□□□ -1.76
UBR1-209	ENST00000569243	COL20A1	Q9P218	1284 aa		4.04	□□□□□ -1.76
UBR1-209	ENST00000569243	HDAC9	Q9UKV0	1011 aa		4.04	□□□□□ -1.76
UBR1-209	ENST00000569243	SLC27A6	Q9Y2P4	619 aa		4.04	□□□□□ -1.76
UBR1-209	ENST00000569243	TTBK1	Q5TCY1	1321 aa	Predicted RBP	4.03	□□□□□ -1.76
UBR1-209	ENST00000569243	IGLV5-39	A0A0G2JS06	123 aa		4.03	□□□□□ -1.76
UBR1-209	ENST00000569243	AGPS	O00116	658 aa		4.03	□□□□□ -1.76
UBR1-209	ENST00000569243	TLX3	O43711	291 aa	Predicted RBP	4.03	□□□□□ -1.76
UBR1-209	ENST00000569243	PLAU	P00749	431 aa		4.03	□□□□□ -1.76
UBR1-209	ENST00000569243	IL1R1	P14778	569 aa		4.03	□□□□□ -1.76
UBR1-209	ENST00000569243	TBXAS1	P24557	533 aa	Predicted RBP	4.03	□□□□□ -1.76
UBR1-209	ENST00000569243	RBL1	P28749	1068 aa		4.03	□□□□□ -1.76
UBR1-209	ENST00000569243	IL6ST	P40189	918 aa	Predicted RBP	4.03	□□□□□ -1.76
UBR1-209	ENST00000569243	JAK3	P52333	1124 aa		4.03	□□□□□ -1.76
UBR1-209	ENST00000569243	SLC12A2	P55011	1212 aa		4.03	□□□□□ -1.76
UBR1-209	ENST00000569243	CCDC15	Q0P6D6	951 aa		4.03	□□□□□ -1.76
UBR1-209	ENST00000569243	UBAP2	Q5T6F2	1119 aa	Known RBP	4.03	□□□□□ -1.76
UBR1-209	ENST00000569243	FAM57B	Q71RH2	274 aa		4.03	□□□□□ -1.76
UBR1-209	ENST00000569243	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	4.03	□□□□□ -1.76
UBR1-209	ENST00000569243	TUBB6	Q9BUF5	446 aa		4.03	□□□□□ -1.76
UBR1-209	ENST00000569243	SELENOO	Q9BVL4	669 aa		4.03	□□□□□ -1.76
UBR1-209	ENST00000569243	ZBTB40	Q9NUA8	1239 aa		4.03	□□□□□ -1.76
UBR1-209	ENST00000569243	ASAP1	Q9ULH1	1129 aa		4.03	□□□□□ -1.76
UBR1-209	ENST00000569243	THRAP3	Q9Y2W1	955 aa	Known RBP	4.03	□□□□□ -1.76
UBR1-209	ENST00000569243	TRIP12	Q14669	1992 aa	Predicted RBP	4.02	□□□□□ -1.77
UBR1-209	ENST00000569243	RAB27B	O00194	218 aa		4.02	□□□□□ -1.77
UBR1-209	ENST00000569243	FGF2	P09038	288 aa		4.02	□□□□□ -1.77
UBR1-209	ENST00000569243	TMIGD3	P0DMS9	266 aa	Predicted RBP	4.02	□□□□□ -1.77
UBR1-209	ENST00000569243	TMEM225B	P0DP42	221 aa		4.02	□□□□□ -1.77
UBR1-209	ENST00000569243	CYP19A1	P11511	503 aa	Predicted RBP	4.02	□□□□□ -1.77
UBR1-209	ENST00000569243	MYF5	P13349	255 aa		4.02	□□□□□ -1.77
UBR1-209	ENST00000569243	ZKSCAN1	P17029	563 aa	Predicted RBP	4.02	□□□□□ -1.77
UBR1-209	ENST00000569243	DGKQ	P52824	942 aa		4.02	□□□□□ -1.77
UBR1-209	ENST00000569243	HILS1	P60008	231 aa		4.02	□□□□□ -1.77
UBR1-209	ENST00000569243	KRTAP10-12	P60413	245 aa		4.02	□□□□□ -1.77
UBR1-209	ENST00000569243	RPS16	P62249	146 aa	Known RBP	4.02	□□□□□ -1.77
UBR1-209	ENST00000569243	STK3	Q13188	491 aa		4.02	□□□□□ -1.77
UBR1-209	ENST00000569243	NFE2	Q16621	373 aa	Predicted RBP	4.02	□□□□□ -1.77
UBR1-209	ENST00000569243	PLEKHG6	Q3KR16	790 aa		4.02	□□□□□ -1.77
UBR1-209	ENST00000569243	FAM102B	Q5T8I3	360 aa		4.02	□□□□□ -1.77
UBR1-209	ENST00000569243	MANEAL	Q5VSG8	457 aa		4.02	□□□□□ -1.77
UBR1-209	ENST00000569243	KRTAP5-2	Q701N4	177 aa		4.02	□□□□□ -1.77
UBR1-209	ENST00000569243	TMPRSS12	Q86WS5	348 aa		4.02	□□□□□ -1.77
UBR1-209	ENST00000569243	COL23A1	Q86Y22	540 aa	Predicted RBP	4.02	□□□□□ -1.77
UBR1-209	ENST00000569243	PELI3	Q8N2H9	469 aa		4.02	□□□□□ -1.77
UBR1-209	ENST00000569243	THOC3	Q96J01	351 aa	Known RBP	4.02	□□□□□ -1.77
UBR1-209	ENST00000569243	STRBP	Q96SI9	672 aa	Known RBP	4.02	□□□□□ -1.77
UBR1-209	ENST00000569243	TM2D2	Q9BX73	214 aa		4.02	□□□□□ -1.77
UBR1-209	ENST00000569243	USP29	Q9HBJ7	922 aa		4.02	□□□□□ -1.77
UBR1-209	ENST00000569243	ZNF287	Q9HBT7	754 aa		4.02	□□□□□ -1.77
UBR1-209	ENST00000569243	MID2	Q9UJV3	735 aa		4.02	□□□□□ -1.77
UBR1-209	ENST00000569243	SIRT4	Q9Y6E7	314 aa	Predicted RBP	4.02	□□□□□ -1.77
UBR1-209	ENST00000569243	EVPL	Q92817	2033 aa		4.02	□□□□□ -1.77
UBR1-209	ENST00000569243	SPATA31A5	Q5VU36	1347 aa		4.01	□□□□□ -1.77
UBR1-209	ENST00000569243	SPATA31A7	Q8IWB4	1347 aa		4.01	□□□□□ -1.77
UBR1-209	ENST00000569243	CKAP5	Q14008	2032 aa		4.01	□□□□□ -1.77
UBR1-209	ENST00000569243	C2CD4B	A6NLJ0	364 aa		4.01	□□□□□ -1.77
UBR1-209	ENST00000569243	GOLIM4	O00461	696 aa		4.01	□□□□□ -1.77
UBR1-209	ENST00000569243	SPTLC2	O15270	562 aa		4.01	□□□□□ -1.77
UBR1-209	ENST00000569243	PRPF4	O43172	522 aa	Known RBP eCLIP	4.01	□□□□□ -1.77
UBR1-209	ENST00000569243	T-ENOL	P0DO92	83 aa		4.01	□□□□□ -1.77
UBR1-209	ENST00000569243	RPS6KB1	P23443	525 aa		4.01	□□□□□ -1.77
UBR1-209	ENST00000569243	DUSP1	P28562	367 aa		4.01	□□□□□ -1.77
UBR1-209	ENST00000569243	ALDH7A1	P49419	539 aa	Known RBP	4.01	□□□□□ -1.77
UBR1-209	ENST00000569243	PGGT1B	P53609	377 aa		4.01	□□□□□ -1.77
UBR1-209	ENST00000569243	WDR5	P61964	334 aa	Known RBP	4.01	□□□□□ -1.77
UBR1-209	ENST00000569243	ACOX1	Q15067	660 aa		4.01	□□□□□ -1.77
UBR1-209	ENST00000569243	C3orf38	Q5JPI3	329 aa		4.01	□□□□□ -1.77
UBR1-209	ENST00000569243	MANEA	Q5SRI9	462 aa		4.01	□□□□□ -1.77
UBR1-209	ENST00000569243	RNF220	Q5VTB9	566 aa		4.01	□□□□□ -1.77
UBR1-209	ENST00000569243	PDXDC1	Q6P996	788 aa		4.01	□□□□□ -1.77
UBR1-209	ENST00000569243	CLEC9A	Q6UXN8	241 aa		4.01	□□□□□ -1.77
UBR1-209	ENST00000569243	CHST15	Q7LFX5	561 aa	Predicted RBP	4.01	□□□□□ -1.77
UBR1-209	ENST00000569243	FOXP4	Q8IVH2	680 aa	Predicted RBP	4.01	□□□□□ -1.77
UBR1-209	ENST00000569243	TCEAL8	Q8IYN2	117 aa		4.01	□□□□□ -1.77
UBR1-209	ENST00000569243	DCP1B	Q8IZD4	617 aa	Known RBP	4.01	□□□□□ -1.77
UBR1-209	ENST00000569243	LRTOMT	Q8WZ04	291 aa		4.01	□□□□□ -1.77
UBR1-209	ENST00000569243	FCRL5	Q96RD9	977 aa		4.01	□□□□□ -1.77
UBR1-209	ENST00000569243	MLXIP	Q9HAP2	919 aa		4.01	□□□□□ -1.77
UBR1-209	ENST00000569243	AGO4	Q9HCK5	861 aa	Known RBP	4.01	□□□□□ -1.77
UBR1-209	ENST00000569243	VPS45	Q9NRW7	570 aa		4.01	□□□□□ -1.77
UBR1-209	ENST00000569243	ARL8B	Q9NVJ2	186 aa		4.01	□□□□□ -1.77
UBR1-209	ENST00000569243	TMEM45A	Q9NWC5	275 aa		4.01	□□□□□ -1.77
UBR1-209	ENST00000569243	OGDHL	Q9ULD0	1010 aa		4.01	□□□□□ -1.77
UBR1-209	ENST00000569243	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	4	□□□□□ -1.77
UBR1-209	ENST00000569243	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	4	□□□□□ -1.77
UBR1-209	ENST00000569243	PRAMEF2	O60811	474 aa		4	□□□□□ -1.77
UBR1-209	ENST00000569243	SGPL1	O95470	568 aa		4	□□□□□ -1.77
UBR1-209	ENST00000569243	MBP	P02686	304 aa	Predicted RBP	4	□□□□□ -1.77
UBR1-209	ENST00000569243	HTR7	P34969	479 aa		4	□□□□□ -1.77
UBR1-209	ENST00000569243	MTAP	Q13126	283 aa		4	□□□□□ -1.77
UBR1-209	ENST00000569243	KCNJ12	Q14500	433 aa		4	□□□□□ -1.77
UBR1-209	ENST00000569243	KRT71	Q3SY84	523 aa		4	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms