RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 ZNF516Q92618 1163 aa13.15□□□□□ -0.3
SNX29-207ENST00000568949 CCDC127Q96BQ5 260 aa13.15□□□□□ -0.3
SNX29-207ENST00000568949 CRELD1Q96HD1 420 aa13.15□□□□□ -0.3
SNX29-207ENST00000568949 SMOQ99835 787 aa13.15□□□□□ -0.3
SNX29-207ENST00000568949 OSGEPQ9NPF4 335 aa13.15□□□□□ -0.3
SNX29-207ENST00000568949 KRT82Q9NSB4 513 aa13.15□□□□□ -0.3
SNX29-207ENST00000568949 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.15□□□□□ -0.3
SNX29-207ENST00000568949 SMC3Q9UQE7 1217 aa13.15□□□□□ -0.3
SNX29-207ENST00000568949 BTBD3Q9Y2F9 522 aa13.15□□□□□ -0.3
SNX29-207ENST00000568949 CLIC4Q9Y696 253 aa13.15□□□□□ -0.3
SNX29-207ENST00000568949 NUMA1Q14980 2115 aa13.15□□□□□ -0.3
SNX29-207ENST00000568949 FAM149AA5PLN7 773 aa13.14□□□□□ -0.31
SNX29-207ENST00000568949 GOLGA8CPA6NN73 597 aa13.14□□□□□ -0.31
SNX29-207ENST00000568949 ATXN7O15265 892 aaPredicted RBP13.14□□□□□ -0.31
SNX29-207ENST00000568949 EIF3DO15371 548 aaKnown RBP eCLIP13.14□□□□□ -0.31
SNX29-207ENST00000568949 PENKP01210 267 aaPredicted RBP13.14□□□□□ -0.31
SNX29-207ENST00000568949 ACADMP11310 421 aa13.14□□□□□ -0.31
SNX29-207ENST00000568949 GRK6P43250 576 aa13.14□□□□□ -0.31
SNX29-207ENST00000568949 CSNK1EP49674 416 aaKnown RBP13.14□□□□□ -0.31
SNX29-207ENST00000568949 MFAP3P55082 362 aa13.14□□□□□ -0.31
SNX29-207ENST00000568949 SNRPFP62306 86 aaKnown RBP13.14□□□□□ -0.31
SNX29-207ENST00000568949 ORC1Q13415 861 aa13.14□□□□□ -0.31
SNX29-207ENST00000568949 TEAD4Q15561 434 aa13.14□□□□□ -0.31
SNX29-207ENST00000568949 KIF19Q2TAC6 998 aa13.14□□□□□ -0.31
SNX29-207ENST00000568949 XXYLT1Q8NBI6 393 aa13.14□□□□□ -0.31
SNX29-207ENST00000568949 LSM14AQ8ND56 463 aaKnown RBP13.14□□□□□ -0.31
SNX29-207ENST00000568949 ZNF507Q8TCN5 953 aa13.14□□□□□ -0.31
SNX29-207ENST00000568949 BHMTQ93088 406 aa13.14□□□□□ -0.31
SNX29-207ENST00000568949 SMYD3Q9H7B4 428 aa13.14□□□□□ -0.31
SNX29-207ENST00000568949 AGPAT3Q9NRZ7 376 aa13.14□□□□□ -0.31
SNX29-207ENST00000568949 PLK2Q9NYY3 685 aa13.14□□□□□ -0.31
SNX29-207ENST00000568949 DNMT3LQ9UJW3 386 aa13.14□□□□□ -0.31
SNX29-207ENST00000568949 SCML2Q9UQR0 700 aa13.14□□□□□ -0.31
SNX29-207ENST00000568949 ZNF510Q9Y2H8 683 aa13.14□□□□□ -0.31
SNX29-207ENST00000568949 SNX11Q9Y5W9 270 aa13.14□□□□□ -0.31
SNX29-207ENST00000568949 TMEM131Q92545 1883 aa13.13□□□□□ -0.31
SNX29-207ENST00000568949 PAPSS1O43252 624 aaPredicted RBP13.13□□□□□ -0.31
SNX29-207ENST00000568949 TGFB1I1O43294 461 aa13.13□□□□□ -0.31
SNX29-207ENST00000568949 PHACTR2O75167 634 aa13.13□□□□□ -0.31
SNX29-207ENST00000568949 BEST1O76090 585 aa13.13□□□□□ -0.31
SNX29-207ENST00000568949 PRB1P04280 392 aa13.13□□□□□ -0.31
SNX29-207ENST00000568949 C7P10643 843 aa13.13□□□□□ -0.31
SNX29-207ENST00000568949 HLA-EP13747 358 aa13.13□□□□□ -0.31
SNX29-207ENST00000568949 GRIA4P48058 902 aa13.13□□□□□ -0.31
SNX29-207ENST00000568949 COPAP53621 1224 aa13.13□□□□□ -0.31
SNX29-207ENST00000568949 CDH8P55286 799 aa13.13□□□□□ -0.31
SNX29-207ENST00000568949 MAP3K7CLP57077 242 aa13.13□□□□□ -0.31
SNX29-207ENST00000568949 EIF4HQ15056 248 aaKnown RBP13.13□□□□□ -0.31
SNX29-207ENST00000568949 GEN1Q17RS7 908 aa13.13□□□□□ -0.31
SNX29-207ENST00000568949 ZNF667Q5HYK9 610 aa13.13□□□□□ -0.31
SNX29-207ENST00000568949 EPM2AIP1Q7L775 607 aaPredicted RBP13.13□□□□□ -0.31
SNX29-207ENST00000568949 TMPRSS12Q86WS5 348 aa13.13□□□□□ -0.31
SNX29-207ENST00000568949 CRYBG2Q8N1P7 616 aa13.13□□□□□ -0.31
SNX29-207ENST00000568949 ZNF276Q8N554 614 aa13.13□□□□□ -0.31
SNX29-207ENST00000568949 IGSF8Q969P0 613 aa13.13□□□□□ -0.31
SNX29-207ENST00000568949 P2RY11Q96G91 374 aa13.13□□□□□ -0.31
SNX29-207ENST00000568949 CLIC6Q96NY7 704 aa13.13□□□□□ -0.31
SNX29-207ENST00000568949 LRRC27Q9C0I9 530 aa13.13□□□□□ -0.31
SNX29-207ENST00000568949 GZF1Q9H116 711 aaPredicted RBP13.13□□□□□ -0.31
SNX29-207ENST00000568949 OSER1Q9NX31 292 aa13.13□□□□□ -0.31
SNX29-207ENST00000568949 ANKRD6Q9Y2G4 727 aa13.13□□□□□ -0.31
SNX29-207ENST00000568949 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.13□□□□□ -0.31
SNX29-207ENST00000568949 TIMM44O43615 452 aa13.12□□□□□ -0.31
SNX29-207ENST00000568949 C1QL1O75973 258 aa13.12□□□□□ -0.31
SNX29-207ENST00000568949 STC2O76061 302 aa13.12□□□□□ -0.31
SNX29-207ENST00000568949 RARGP13631 454 aa13.12□□□□□ -0.31
SNX29-207ENST00000568949 CHKAP35790 457 aa13.12□□□□□ -0.31
SNX29-207ENST00000568949 CCT8P50990 548 aa13.12□□□□□ -0.31
SNX29-207ENST00000568949 ZNF234Q14588 700 aa13.12□□□□□ -0.31
SNX29-207ENST00000568949 BMT2Q1RMZ1 405 aa13.12□□□□□ -0.31
SNX29-207ENST00000568949 ZNF699Q32M78 642 aa13.12□□□□□ -0.31
SNX29-207ENST00000568949 INAVAQ3KP66 663 aa13.12□□□□□ -0.31
SNX29-207ENST00000568949 FYB2Q5VWT5 728 aa13.12□□□□□ -0.31
SNX29-207ENST00000568949 ANKS1BQ7Z6G8 1248 aa13.12□□□□□ -0.31
SNX29-207ENST00000568949 TADA2BQ86TJ2 420 aa13.12□□□□□ -0.31
SNX29-207ENST00000568949 ACOT1Q86TX2 421 aa13.12□□□□□ -0.31
SNX29-207ENST00000568949 PIP4K2CQ8TBX8 421 aa13.12□□□□□ -0.31
SNX29-207ENST00000568949 SLC2A14Q8TDB8 520 aa13.12□□□□□ -0.31
SNX29-207ENST00000568949 HPS3Q969F9 1004 aa13.12□□□□□ -0.31
SNX29-207ENST00000568949 NXPE2Q96DL1 559 aa13.12□□□□□ -0.31
SNX29-207ENST00000568949 PIWIL1Q96J94 861 aaKnown RBP13.12□□□□□ -0.31
SNX29-207ENST00000568949 DCBLD2Q96PD2 775 aa13.12□□□□□ -0.31
SNX29-207ENST00000568949 SDCBP2Q9H190 292 aa13.12□□□□□ -0.31
SNX29-207ENST00000568949 TNMDQ9H2S6 317 aa13.12□□□□□ -0.31
SNX29-207ENST00000568949 PRORYQ9H606 182 aa13.12□□□□□ -0.31
SNX29-207ENST00000568949 NMUR1Q9HB89 426 aa13.12□□□□□ -0.31
SNX29-207ENST00000568949 PNPLA8Q9NP80 782 aa13.12□□□□□ -0.31
SNX29-207ENST00000568949 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.12□□□□□ -0.31
SNX29-207ENST00000568949 ELOVL2Q9NXB9 296 aa13.12□□□□□ -0.31
SNX29-207ENST00000568949 PCDHGA1Q9Y5H4 931 aa13.12□□□□□ -0.31
SNX29-207ENST00000568949 PCDHA5Q9Y5H7 936 aa13.12□□□□□ -0.31
SNX29-207ENST00000568949 MORC2Q9Y6X9 1032 aaPredicted RBP13.12□□□□□ -0.31
SNX29-207ENST00000568949 A0A087X0B3 334 aa13.11□□□□□ -0.31
SNX29-207ENST00000568949 CLIC2O15247 247 aa13.11□□□□□ -0.31
SNX29-207ENST00000568949 CYP26A1O43174 497 aa13.11□□□□□ -0.31
SNX29-207ENST00000568949 DFNA5O60443 496 aa13.11□□□□□ -0.31
SNX29-207ENST00000568949 KLKB1P03952 638 aa13.11□□□□□ -0.31
SNX29-207ENST00000568949 CDK4P11802 303 aa13.11□□□□□ -0.31
SNX29-207ENST00000568949 CCDC130P13994 396 aa13.11□□□□□ -0.31
SNX29-207ENST00000568949 PRKCHP24723 683 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms