RNA–Protein interactions for RNA: ENST00000568903.5

TNRC6A-215, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 943 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-215ENST00000568903 KLF16Q9BXK1 252 aaPredicted RBP10.35□□□□□ -0.75
TNRC6A-215ENST00000568903 MMRN2Q9H8L6 949 aa10.35□□□□□ -0.75
TNRC6A-215ENST00000568903 MAGEF1Q9HAY2 307 aa10.35□□□□□ -0.75
TNRC6A-215ENST00000568903 CSNK1G1Q9HCP0 422 aa10.35□□□□□ -0.75
TNRC6A-215ENST00000568903 SPHK2Q9NRA0 654 aa10.35□□□□□ -0.75
TNRC6A-215ENST00000568903 EHD2Q9NZN4 543 aa10.35□□□□□ -0.75
TNRC6A-215ENST00000568903 BCCIPQ9P287 314 aaKnown RBP eCLIP10.35□□□□□ -0.75
TNRC6A-215ENST00000568903 ANGPTL2Q9UKU9 493 aa10.35□□□□□ -0.75
TNRC6A-215ENST00000568903 SH3BP1Q9Y3L3 701 aa10.35□□□□□ -0.75
TNRC6A-215ENST00000568903 RAD54BQ9Y620 910 aa10.35□□□□□ -0.75
TNRC6A-215ENST00000568903 NUP205Q92621 2012 aa10.34□□□□□ -0.75
TNRC6A-215ENST00000568903 A0A1W2PQF6 199 aa10.34□□□□□ -0.75
TNRC6A-215ENST00000568903 A0A1W2PQH9 124 aa10.34□□□□□ -0.75
TNRC6A-215ENST00000568903 C1QTNF9BB2RNN3 333 aa10.34□□□□□ -0.75
TNRC6A-215ENST00000568903 WASH3PC4AMC7 463 aa10.34□□□□□ -0.75
TNRC6A-215ENST00000568903 KHNYNO15037 678 aaKnown RBP10.34□□□□□ -0.75
TNRC6A-215ENST00000568903 TLR5O60602 858 aa10.34□□□□□ -0.75
TNRC6A-215ENST00000568903 ASS1P00966 412 aaKnown RBP10.34□□□□□ -0.75
TNRC6A-215ENST00000568903 C1QTNF9P0C862 333 aa10.34□□□□□ -0.75
TNRC6A-215ENST00000568903 GABRG2P18507 467 aa10.34□□□□□ -0.75
TNRC6A-215ENST00000568903 CD58P19256 250 aa10.34□□□□□ -0.75
TNRC6A-215ENST00000568903 ITPKAP23677 461 aa10.34□□□□□ -0.75
TNRC6A-215ENST00000568903 EIF2DP41214 584 aaKnown RBP10.34□□□□□ -0.75
TNRC6A-215ENST00000568903 TNFRSF4P43489 277 aa10.34□□□□□ -0.75
TNRC6A-215ENST00000568903 GCLMP48507 274 aa10.34□□□□□ -0.75
TNRC6A-215ENST00000568903 GAD2Q05329 585 aa10.34□□□□□ -0.75
TNRC6A-215ENST00000568903 FOXC1Q12948 553 aa10.34□□□□□ -0.75
TNRC6A-215ENST00000568903 SGSM1Q2NKQ1 1148 aa10.34□□□□□ -0.75
TNRC6A-215ENST00000568903 C4orf48Q5BLP8 95 aa10.34□□□□□ -0.75
TNRC6A-215ENST00000568903 C10orf76Q5T2E6 689 aa10.34□□□□□ -0.75
TNRC6A-215ENST00000568903 CLEC20AQ6ZU45 233 aa10.34□□□□□ -0.75
TNRC6A-215ENST00000568903 SCD5Q86SK9 330 aa10.34□□□□□ -0.75
TNRC6A-215ENST00000568903 SLC9A9Q8IVB4 645 aa10.34□□□□□ -0.75
TNRC6A-215ENST00000568903 SPNS2Q8IVW8 549 aa10.34□□□□□ -0.75
TNRC6A-215ENST00000568903 CEP57L1Q8IYX8 460 aa10.34□□□□□ -0.75
TNRC6A-215ENST00000568903 ZNF513Q8N8E2 541 aaPredicted RBP10.34□□□□□ -0.75
TNRC6A-215ENST00000568903 PDZD8Q8NEN9 1154 aa10.34□□□□□ -0.75
TNRC6A-215ENST00000568903 DEFB124Q8NES8 71 aa10.34□□□□□ -0.75
TNRC6A-215ENST00000568903 OVCA2Q8WZ82 227 aa10.34□□□□□ -0.75
TNRC6A-215ENST00000568903 DDX1Q92499 740 aaKnown RBP10.34□□□□□ -0.75
TNRC6A-215ENST00000568903 TNIP3Q96KP6 325 aa10.34□□□□□ -0.75
TNRC6A-215ENST00000568903 CD248Q9HCU0 757 aa10.34□□□□□ -0.75
TNRC6A-215ENST00000568903 EXOC1Q9NV70 894 aa10.34□□□□□ -0.75
TNRC6A-215ENST00000568903 PLK2Q9NYY3 685 aa10.34□□□□□ -0.75
TNRC6A-215ENST00000568903 TBC1D14Q9P2M4 693 aa10.34□□□□□ -0.75
TNRC6A-215ENST00000568903 CGNQ9P2M7 1197 aaKnown RBP10.34□□□□□ -0.75
TNRC6A-215ENST00000568903 WASF3Q9UPY6 502 aa10.34□□□□□ -0.75
TNRC6A-215ENST00000568903 HPSEQ9Y251 543 aa10.34□□□□□ -0.75
TNRC6A-215ENST00000568903 GON4LQ3T8J9 2241 aa10.34□□□□□ -0.75
TNRC6A-215ENST00000568903 NEDD8-MDP1E9PL57 170 aa10.33□□□□□ -0.76
TNRC6A-215ENST00000568903 HOXC11O43248 304 aaPredicted RBP10.33□□□□□ -0.76
TNRC6A-215ENST00000568903 KLKB1P03952 638 aa10.33□□□□□ -0.76
TNRC6A-215ENST00000568903 RPN1P04843 607 aaKnown RBP10.33□□□□□ -0.76
TNRC6A-215ENST00000568903 CISD3P0C7P0 127 aa10.33□□□□□ -0.76
TNRC6A-215ENST00000568903 ACO1P21399 889 aaKnown RBP10.33□□□□□ -0.76
TNRC6A-215ENST00000568903 PIK3CAP42336 1068 aa10.33□□□□□ -0.76
TNRC6A-215ENST00000568903 NDUFA8P51970 172 aa10.33□□□□□ -0.76
TNRC6A-215ENST00000568903 SHC2P98077 582 aa10.33□□□□□ -0.76
TNRC6A-215ENST00000568903 ZNF394Q53GI3 561 aa10.33□□□□□ -0.76
TNRC6A-215ENST00000568903 TRIM61Q5EBN2 209 aa10.33□□□□□ -0.76
TNRC6A-215ENST00000568903 EOGTQ5NDL2 527 aa10.33□□□□□ -0.76
TNRC6A-215ENST00000568903 HTR3DQ70Z44 454 aa10.33□□□□□ -0.76
TNRC6A-215ENST00000568903 DDX42Q86XP3 938 aaKnown RBP eCLIP10.33□□□□□ -0.76
TNRC6A-215ENST00000568903 DEPDC4Q8N2C3 294 aa10.33□□□□□ -0.76
TNRC6A-215ENST00000568903 TERB1Q8NA31 727 aa10.33□□□□□ -0.76
TNRC6A-215ENST00000568903 NDRG1Q92597 394 aaKnown RBP10.33□□□□□ -0.76
TNRC6A-215ENST00000568903 SEMA4DQ92854 862 aa10.33□□□□□ -0.76
TNRC6A-215ENST00000568903 CYFIP2Q96F07 1278 aa10.33□□□□□ -0.76
TNRC6A-215ENST00000568903 NACA2Q9H009 215 aa10.33□□□□□ -0.76
TNRC6A-215ENST00000568903 TMEM9BQ9NQ34 198 aa10.33□□□□□ -0.76
TNRC6A-215ENST00000568903 DNAJC17Q9NVM6 304 aaKnown RBP10.33□□□□□ -0.76
TNRC6A-215ENST00000568903 CALCOCO1Q9P1Z2 691 aa10.33□□□□□ -0.76
TNRC6A-215ENST00000568903 DEC1Q9P2X7 70 aa10.33□□□□□ -0.76
TNRC6A-215ENST00000568903 MYO18AQ92614 2054 aaKnown RBP10.32□□□□□ -0.76
TNRC6A-215ENST00000568903 PDXKO00764 312 aa10.32□□□□□ -0.76
TNRC6A-215ENST00000568903 ALDH1A2O94788 518 aa10.32□□□□□ -0.76
TNRC6A-215ENST00000568903 FAM200BP0CF97 657 aa10.32□□□□□ -0.76
TNRC6A-215ENST00000568903 RARGP13631 454 aa10.32□□□□□ -0.76
TNRC6A-215ENST00000568903 HOXB2P14652 356 aa10.32□□□□□ -0.76
TNRC6A-215ENST00000568903 TYRP14679 529 aa10.32□□□□□ -0.76
TNRC6A-215ENST00000568903 ENGP17813 658 aa10.32□□□□□ -0.76
TNRC6A-215ENST00000568903 CMA1P23946 247 aa10.32□□□□□ -0.76
TNRC6A-215ENST00000568903 RPIAP49247 311 aa10.32□□□□□ -0.76
TNRC6A-215ENST00000568903 TUBP50607 506 aa10.32□□□□□ -0.76
TNRC6A-215ENST00000568903 VAMP7P51809 220 aa10.32□□□□□ -0.76
TNRC6A-215ENST00000568903 AP3M2P53677 418 aa10.32□□□□□ -0.76
TNRC6A-215ENST00000568903 FAM193AP78312 1265 aa10.32□□□□□ -0.76
TNRC6A-215ENST00000568903 ZNF252P-AS1Q0IIN9 211 aa10.32□□□□□ -0.76
TNRC6A-215ENST00000568903 PPP1R26Q5T8A7 1209 aaPredicted RBP10.32□□□□□ -0.76
TNRC6A-215ENST00000568903 BTBD8Q5XKL5 378 aa10.32□□□□□ -0.76
TNRC6A-215ENST00000568903 LPCAT2Q7L5N7 544 aa10.32□□□□□ -0.76
TNRC6A-215ENST00000568903 SLC41A1Q8IVJ1 513 aa10.32□□□□□ -0.76
TNRC6A-215ENST00000568903 HSCBQ8IWL3 235 aa10.32□□□□□ -0.76
TNRC6A-215ENST00000568903 SMYD4Q8IYR2 804 aaPredicted RBP10.32□□□□□ -0.76
TNRC6A-215ENST00000568903 KIAA1958Q8N8K9 716 aa10.32□□□□□ -0.76
TNRC6A-215ENST00000568903 GOLGA5Q8TBA6 731 aa10.32□□□□□ -0.76
TNRC6A-215ENST00000568903 TMEM174Q8WUU8 243 aa10.32□□□□□ -0.76
TNRC6A-215ENST00000568903 HNRNPABQ99729 332 aaKnown RBP10.32□□□□□ -0.76
TNRC6A-215ENST00000568903 BBS2Q9BXC9 721 aa10.32□□□□□ -0.76
TNRC6A-215ENST00000568903 GOLPH3LQ9H4A5 285 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms