RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 ELF2Q15723 593 aa15.12■□□□□ 0.01
CMTM3-215ENST00000568477 USP39Q53GS9 565 aaKnown RBP15.12■□□□□ 0.01
CMTM3-215ENST00000568477 TMEM92Q6UXU6 159 aa15.12■□□□□ 0.01
CMTM3-215ENST00000568477 BHLHA9Q7RTU4 235 aa15.12■□□□□ 0.01
CMTM3-215ENST00000568477 C11orf74Q86VG3 221 aa15.12■□□□□ 0.01
CMTM3-215ENST00000568477 RASSF3Q86WH2 238 aa15.12■□□□□ 0.01
CMTM3-215ENST00000568477 SCML4Q8N228 414 aa15.12■□□□□ 0.01
CMTM3-215ENST00000568477 ZNF513Q8N8E2 541 aaPredicted RBP15.12■□□□□ 0.01
CMTM3-215ENST00000568477 MLKLQ8NB16 471 aa15.12■□□□□ 0.01
CMTM3-215ENST00000568477 RNF139Q8WU17 664 aa15.12■□□□□ 0.01
CMTM3-215ENST00000568477 BHMTQ93088 406 aa15.12■□□□□ 0.01
CMTM3-215ENST00000568477 ZC3H10Q96K80 434 aaKnown RBP15.12■□□□□ 0.01
CMTM3-215ENST00000568477 KREMEN1Q96MU8 473 aa15.12■□□□□ 0.01
CMTM3-215ENST00000568477 TPSD1Q9BZJ3 242 aa15.12■□□□□ 0.01
CMTM3-215ENST00000568477 CLSTN2Q9H4D0 955 aa15.12■□□□□ 0.01
CMTM3-215ENST00000568477 POLMQ9NP87 494 aaPredicted RBP15.12■□□□□ 0.01
CMTM3-215ENST00000568477 ZDHHC4Q9NPG8 344 aa15.12■□□□□ 0.01
CMTM3-215ENST00000568477 CNGB3Q9NQW8 809 aa15.12■□□□□ 0.01
CMTM3-215ENST00000568477 DLL3Q9NYJ7 618 aa15.12■□□□□ 0.01
CMTM3-215ENST00000568477 CDV3Q9UKY7 258 aaKnown RBP15.12■□□□□ 0.01
CMTM3-215ENST00000568477 RALGAPA1Q6GYQ0 2036 aa15.11■□□□□ 0.01
CMTM3-215ENST00000568477 YJEFN3A6XGL0 299 aa15.11■□□□□ 0.01
CMTM3-215ENST00000568477 E7ENQ6 273 aa15.11■□□□□ 0.01
CMTM3-215ENST00000568477 DCLK1O15075 740 aa15.11■□□□□ 0.01
CMTM3-215ENST00000568477 RHOBTB1O94844 696 aa15.11■□□□□ 0.01
CMTM3-215ENST00000568477 KRT5P13647 590 aa15.11■□□□□ 0.01
CMTM3-215ENST00000568477 LCP1P13796 627 aa15.11■□□□□ 0.01
CMTM3-215ENST00000568477 HNRNPLP14866 589 aaKnown RBP eCLIP15.11■□□□□ 0.01
CMTM3-215ENST00000568477 CHKAP35790 457 aa15.11■□□□□ 0.01
CMTM3-215ENST00000568477 DGKGP49619 791 aa15.11■□□□□ 0.01
CMTM3-215ENST00000568477 RGS7P49802 495 aa15.11■□□□□ 0.01
CMTM3-215ENST00000568477 DAOAP59103 153 aa15.11■□□□□ 0.01
CMTM3-215ENST00000568477 PLK5Q496M5 336 aa15.11■□□□□ 0.01
CMTM3-215ENST00000568477 BSPRYQ5W0U4 402 aa15.11■□□□□ 0.01
CMTM3-215ENST00000568477 PRR23CQ6ZRP0 262 aa15.11■□□□□ 0.01
CMTM3-215ENST00000568477 DGLUCYQ7Z3D6 616 aa15.11■□□□□ 0.01
CMTM3-215ENST00000568477 CREBRFQ8IUR6 639 aa15.11■□□□□ 0.01
CMTM3-215ENST00000568477 MDGA1Q8NFP4 955 aa15.11■□□□□ 0.01
CMTM3-215ENST00000568477 SLC35F5Q8WV83 523 aa15.11■□□□□ 0.01
CMTM3-215ENST00000568477 PLD4Q96BZ4 506 aa15.11■□□□□ 0.01
CMTM3-215ENST00000568477 ZSWIM1Q9BR11 485 aa15.11■□□□□ 0.01
CMTM3-215ENST00000568477 ARRDC1-AS1Q9H2J1 176 aa15.11■□□□□ 0.01
CMTM3-215ENST00000568477 HBS1LQ9Y450 684 aaKnown RBP15.11■□□□□ 0.01
CMTM3-215ENST00000568477 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.11■□□□□ 0.01
CMTM3-215ENST00000568477 EML5Q05BV3 1969 aa15.11■□□□□ 0.01
CMTM3-215ENST00000568477 ADAM23O75077 832 aa15.1■□□□□ 0.01
CMTM3-215ENST00000568477 PENKP01210 267 aaPredicted RBP15.1■□□□□ 0.01
CMTM3-215ENST00000568477 CALCAP01258 141 aa15.1■□□□□ 0.01
CMTM3-215ENST00000568477 CYBBP04839 570 aa15.1■□□□□ 0.01
CMTM3-215ENST00000568477 GBP1P32455 592 aa15.1■□□□□ 0.01
CMTM3-215ENST00000568477 TPD52L1Q16890 204 aaPredicted RBP15.1■□□□□ 0.01
CMTM3-215ENST00000568477 PMF1Q6P1K2 205 aa15.1■□□□□ 0.01
CMTM3-215ENST00000568477 DENND1CQ8IV53 801 aa15.1■□□□□ 0.01
CMTM3-215ENST00000568477 FMNL3Q8IVF7 1028 aa15.1■□□□□ 0.01
CMTM3-215ENST00000568477 IRGQQ8WZA9 623 aa15.1■□□□□ 0.01
CMTM3-215ENST00000568477 EDEM1Q92611 657 aa15.1■□□□□ 0.01
CMTM3-215ENST00000568477 MED15Q96RN5 788 aa15.1■□□□□ 0.01
CMTM3-215ENST00000568477 DUSP15Q9H1R2 295 aaPredicted RBP15.1■□□□□ 0.01
CMTM3-215ENST00000568477 UBE2TQ9NPD8 197 aaPredicted RBP15.1■□□□□ 0.01
CMTM3-215ENST00000568477 ABCC13Q9NSE7 274 aa15.1■□□□□ 0.01
CMTM3-215ENST00000568477 PLK2Q9NYY3 685 aa15.1■□□□□ 0.01
CMTM3-215ENST00000568477 BCCIPQ9P287 314 aaKnown RBP eCLIP15.1■□□□□ 0.01
CMTM3-215ENST00000568477 AGO1Q9UL18 857 aaKnown RBP15.1■□□□□ 0.01
CMTM3-215ENST00000568477 CNTN6Q9UQ52 1028 aa15.1■□□□□ 0.01
CMTM3-215ENST00000568477 STARD13Q9Y3M8 1113 aa15.1■□□□□ 0.01
CMTM3-215ENST00000568477 PCDHGA5Q9Y5G8 931 aa15.1■□□□□ 0.01
CMTM3-215ENST00000568477 NCOR2Q9Y618 2525 aa15.1■□□□□ 0.01
CMTM3-215ENST00000568477 TCRBV21S2A2A0A5A6 115 aa15.09■□□□□ 0.01
CMTM3-215ENST00000568477 NTSR1P30989 418 aa15.09■□□□□ 0.01
CMTM3-215ENST00000568477 HARS2P49590 506 aaKnown RBP15.09■□□□□ 0.01
CMTM3-215ENST00000568477 MFAP3P55082 362 aa15.09■□□□□ 0.01
CMTM3-215ENST00000568477 TRIP4Q15650 581 aaPredicted RBP15.09■□□□□ 0.01
CMTM3-215ENST00000568477 EGFLAMQ63HQ2 1017 aa15.09■□□□□ 0.01
CMTM3-215ENST00000568477 GBP6Q6ZN66 633 aa15.09■□□□□ 0.01
CMTM3-215ENST00000568477 TOGARAM2Q6ZUX3 1019 aa15.09■□□□□ 0.01
CMTM3-215ENST00000568477 ENOSF1Q7L5Y1 443 aa15.09■□□□□ 0.01
CMTM3-215ENST00000568477 CHPFQ8IZ52 775 aa15.09■□□□□ 0.01
CMTM3-215ENST00000568477 CPXM2Q8N436 756 aa15.09■□□□□ 0.01
CMTM3-215ENST00000568477 GPT2Q8TD30 523 aa15.09■□□□□ 0.01
CMTM3-215ENST00000568477 NETO1Q8TDF5 533 aa15.09■□□□□ 0.01
CMTM3-215ENST00000568477 HMGB4Q8WW32 186 aa15.09■□□□□ 0.01
CMTM3-215ENST00000568477 GOLGA1Q92805 767 aa15.09■□□□□ 0.01
CMTM3-215ENST00000568477 HSFY1Q96LI6 401 aa15.09■□□□□ 0.01
CMTM3-215ENST00000568477 FAM81BQ96LP2 452 aa15.09■□□□□ 0.01
CMTM3-215ENST00000568477 CRACR2AQ9BSW2 395 aa15.09■□□□□ 0.01
CMTM3-215ENST00000568477 INVSQ9Y283 1065 aa15.09■□□□□ 0.01
CMTM3-215ENST00000568477 DCHS1Q96JQ0 3298 aa15.09■□□□□ 0.01
CMTM3-215ENST00000568477 PRRT4C9JH25 899 aa15.08■□□□□ 0
CMTM3-215ENST00000568477 PIK3R2O00459 728 aa15.08■□□□□ 0
CMTM3-215ENST00000568477 GABBR2O75899 941 aa15.08■□□□□ 0
CMTM3-215ENST00000568477 FBXO21O94952 628 aa15.08■□□□□ 0
CMTM3-215ENST00000568477 CISD3P0C7P0 127 aa15.08■□□□□ 0
CMTM3-215ENST00000568477 HOXB2P14652 356 aa15.08■□□□□ 0
CMTM3-215ENST00000568477 MPLP40238 635 aa15.08■□□□□ 0
CMTM3-215ENST00000568477 WASP42768 502 aa15.08■□□□□ 0
CMTM3-215ENST00000568477 MTIF2P46199 727 aaKnown RBP15.08■□□□□ 0
CMTM3-215ENST00000568477 CCDC6Q16204 474 aa15.08■□□□□ 0
CMTM3-215ENST00000568477 FYB2Q5VWT5 728 aa15.08■□□□□ 0
CMTM3-215ENST00000568477 SDE2Q6IQ49 451 aa15.08■□□□□ 0
CMTM3-215ENST00000568477 MSANTD2Q6P1R3 559 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms