RNA–Protein interactions for RNA: ENST00000567880.5

TCF4-236, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-236ENST00000567880 RBM41Q96IZ5 413 aaKnown RBP10.88□□□□□ -0.67
TCF4-236ENST00000567880 KLHL5Q96PQ7 755 aa10.88□□□□□ -0.67
TCF4-236ENST00000567880 SLITRK1Q96PX8 696 aa10.88□□□□□ -0.67
TCF4-236ENST00000567880 SNRNP25Q9BV90 132 aaKnown RBP10.88□□□□□ -0.67
TCF4-236ENST00000567880 TRIM62Q9BVG3 475 aa10.88□□□□□ -0.67
TCF4-236ENST00000567880 HEMGNQ9BXL5 484 aa10.88□□□□□ -0.67
TCF4-236ENST00000567880 NKX2-4Q9H2Z4 354 aa10.88□□□□□ -0.67
TCF4-236ENST00000567880 RBM12Q9NTZ6 932 aaKnown RBP10.88□□□□□ -0.67
TCF4-236ENST00000567880 PIGVQ9NUD9 493 aa10.88□□□□□ -0.67
TCF4-236ENST00000567880 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.88□□□□□ -0.67
TCF4-236ENST00000567880 OSER1Q9NX31 292 aa10.88□□□□□ -0.67
TCF4-236ENST00000567880 SFMBT1Q9UHJ3 866 aa10.88□□□□□ -0.67
TCF4-236ENST00000567880 INSL5Q9Y5Q6 135 aa10.88□□□□□ -0.67
TCF4-236ENST00000567880 COL4A4P53420 1690 aaPredicted RBP10.87□□□□□ -0.67
TCF4-236ENST00000567880 TRANK1O15050 2925 aa10.87□□□□□ -0.67
TCF4-236ENST00000567880 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.87□□□□□ -0.67
TCF4-236ENST00000567880 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.87□□□□□ -0.67
TCF4-236ENST00000567880 TCRBV7S2A1N4TA0A589 114 aa10.87□□□□□ -0.67
TCF4-236ENST00000567880 TLDC2A0PJX2 215 aa10.87□□□□□ -0.67
TCF4-236ENST00000567880 KRIT1O00522 736 aa10.87□□□□□ -0.67
TCF4-236ENST00000567880 TADA3O75528 432 aa10.87□□□□□ -0.67
TCF4-236ENST00000567880 RB1P06400 928 aa10.87□□□□□ -0.67
TCF4-236ENST00000567880 RALAP11233 206 aa10.87□□□□□ -0.67
TCF4-236ENST00000567880 FAM193AP78312 1265 aa10.87□□□□□ -0.67
TCF4-236ENST00000567880 UBE3AQ05086 875 aa10.87□□□□□ -0.67
TCF4-236ENST00000567880 VEPH1Q14D04 833 aa10.87□□□□□ -0.67
TCF4-236ENST00000567880 ZC3H12AQ5D1E8 599 aaKnown RBP10.87□□□□□ -0.67
TCF4-236ENST00000567880 MFSD7Q6UXD7 560 aa10.87□□□□□ -0.67
TCF4-236ENST00000567880 ANKS1BQ7Z6G8 1248 aa10.87□□□□□ -0.67
TCF4-236ENST00000567880 TAC4Q86UU9 113 aa10.87□□□□□ -0.67
TCF4-236ENST00000567880 TCEAL8Q8IYN2 117 aa10.87□□□□□ -0.67
TCF4-236ENST00000567880 RCOR2Q8IZ40 523 aa10.87□□□□□ -0.67
TCF4-236ENST00000567880 CCDC185Q8N715 623 aa10.87□□□□□ -0.67
TCF4-236ENST00000567880 MRPL43Q8N983 215 aaKnown RBP10.87□□□□□ -0.67
TCF4-236ENST00000567880 NOA1Q8NC60 698 aaKnown RBP10.87□□□□□ -0.67
TCF4-236ENST00000567880 KCTD6Q8NC69 237 aa10.87□□□□□ -0.67
TCF4-236ENST00000567880 DQX1Q8TE96 717 aaKnown RBP10.87□□□□□ -0.67
TCF4-236ENST00000567880 ZNF512Q96ME7 567 aaPredicted RBP10.87□□□□□ -0.67
TCF4-236ENST00000567880 NAP1L3Q99457 506 aaPredicted RBP10.87□□□□□ -0.67
TCF4-236ENST00000567880 NCAPGQ9BPX3 1015 aa10.87□□□□□ -0.67
TCF4-236ENST00000567880 CALN1Q9BXU9 219 aa10.87□□□□□ -0.67
TCF4-236ENST00000567880 TLR8Q9NR97 1041 aaKnown RBP10.87□□□□□ -0.67
TCF4-236ENST00000567880 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.87□□□□□ -0.67
TCF4-236ENST00000567880 IL37Q9NZH6 218 aa10.87□□□□□ -0.67
TCF4-236ENST00000567880 HSFX1Q9UBD0 423 aa10.87□□□□□ -0.67
TCF4-236ENST00000567880 LIMD1Q9UGP4 676 aa10.87□□□□□ -0.67
TCF4-236ENST00000567880 MSRAQ9UJ68 235 aa10.87□□□□□ -0.67
TCF4-236ENST00000567880 FAM92AA1XBS5 289 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 EFCAB8A8MWE9 144 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 GLUD1P00367 558 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 CD48P09326 243 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 CSH1P0DML2 217 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 CSH2P0DML3 217 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 KRT10P13645 584 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 KDELR1P24390 212 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 CETN2P41208 172 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 EPHB3P54753 998 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 CDH6P55285 790 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 ERVK-21P61565 698 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 PLD1Q13393 1074 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 GPM6BQ13491 265 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 CAMK1Q14012 370 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 KRT81Q14533 505 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 NAA30Q147X3 362 aaPredicted RBP10.86□□□□□ -0.67
TCF4-236ENST00000567880 TSNAXIP1Q2TAA8 658 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 PPP6R3Q5H9R7 873 aaPredicted RBP10.86□□□□□ -0.67
TCF4-236ENST00000567880 ERMARDQ5T6L9 678 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 SPOCD1Q6ZMY3 1216 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 SLC13A5Q86YT5 568 aaPredicted RBP10.86□□□□□ -0.67
TCF4-236ENST00000567880 ARHGAP18Q8N392 663 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 ARNTL2Q8WYA1 636 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 RNF34Q969K3 372 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 RPGRIP1Q96KN7 1286 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 SAMD11Q96NU1 681 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 HERPUD2Q9BSE4 406 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 OSBPL8Q9BZF1 889 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 TMPRSS4Q9NRS4 437 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 RRN3Q9NYV6 651 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 TTC7AQ9ULT0 858 aaPredicted RBP10.86□□□□□ -0.67
TCF4-236ENST00000567880 TMA7Q9Y2S6 64 aaKnown RBP10.86□□□□□ -0.67
TCF4-236ENST00000567880 IRAK3Q9Y616 596 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 MSI1O43347 362 aaKnown RBP10.86□□□□□ -0.67
TCF4-236ENST00000567880 RARGP13631 454 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 CA9Q16790 459 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 ERCC6LQ2NKX8 1250 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 BOLA3Q53S33 107 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 TFDP3Q5H9I0 405 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 ZNF572Q7Z3I7 529 aaPredicted RBP10.86□□□□□ -0.67
TCF4-236ENST00000567880 KLHL7Q8IXQ5 586 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 CASP10Q92851 521 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 SPACA7Q96KW9 195 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 CEP295NLQ96MC4 621 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 TTLL2Q9BWV7 592 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 MAGEB5Q9BZ81 275 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 DHX35Q9H5Z1 703 aaKnown RBP10.86□□□□□ -0.67
TCF4-236ENST00000567880 SLC28A3Q9HAS3 691 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 COMMD8Q9NX08 183 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 AP4E1Q9UPM8 1137 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 NR2E1Q9Y466 385 aa10.86□□□□□ -0.67
TCF4-236ENST00000567880 NUP205Q92621 2012 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms