RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 SKA1Q96BD8 255 aa14.59□□□□□ -0.07
SMG1-213ENST00000567737 BIRC7Q96CA5 298 aa14.59□□□□□ -0.07
SMG1-213ENST00000567737 HIC2Q96JB3 615 aa14.59□□□□□ -0.07
SMG1-213ENST00000567737 MMTAG2Q9BU76 263 aaKnown RBP14.59□□□□□ -0.07
SMG1-213ENST00000567737 THAP10Q9P2Z0 257 aaPredicted RBP14.59□□□□□ -0.07
SMG1-213ENST00000567737 ITGA11Q9UKX5 1188 aa14.59□□□□□ -0.07
SMG1-213ENST00000567737 NOL7Q9UMY1 257 aaKnown RBP14.59□□□□□ -0.07
SMG1-213ENST00000567737 R3HCC1Q9Y3T6 440 aaKnown RBP14.59□□□□□ -0.07
SMG1-213ENST00000567737 TISP43B9A030 160 aa14.58□□□□□ -0.08
SMG1-213ENST00000567737 TERTO14746 1132 aaKnown RBP14.58□□□□□ -0.08
SMG1-213ENST00000567737 YKT6O15498 198 aa14.58□□□□□ -0.08
SMG1-213ENST00000567737 MAP3K7O43318 606 aa14.58□□□□□ -0.08
SMG1-213ENST00000567737 FAM13AO94988 1023 aa14.58□□□□□ -0.08
SMG1-213ENST00000567737 FSBPO95073 299 aa14.58□□□□□ -0.08
SMG1-213ENST00000567737 RTN3O95197 1032 aaPredicted RBP14.58□□□□□ -0.08
SMG1-213ENST00000567737 PDGFRBP09619 1106 aa14.58□□□□□ -0.08
SMG1-213ENST00000567737 PLA2G4BP0C869 781 aa14.58□□□□□ -0.08
SMG1-213ENST00000567737 ACSL1P33121 698 aa14.58□□□□□ -0.08
SMG1-213ENST00000567737 TRAPPC10P48553 1259 aa14.58□□□□□ -0.08
SMG1-213ENST00000567737 TUBP50607 506 aa14.58□□□□□ -0.08
SMG1-213ENST00000567737 COPAP53621 1224 aa14.58□□□□□ -0.08
SMG1-213ENST00000567737 RBP5P82980 135 aa14.58□□□□□ -0.08
SMG1-213ENST00000567737 ENPP2Q13822 863 aa14.58□□□□□ -0.08
SMG1-213ENST00000567737 CRELD2Q6UXH1 353 aaPredicted RBP14.58□□□□□ -0.08
SMG1-213ENST00000567737 KDM7AQ6ZMT4 941 aa14.58□□□□□ -0.08
SMG1-213ENST00000567737 ATG14Q6ZNE5 492 aa14.58□□□□□ -0.08
SMG1-213ENST00000567737 HTR3DQ70Z44 454 aa14.58□□□□□ -0.08
SMG1-213ENST00000567737 NUP93Q8N1F7 819 aa14.58□□□□□ -0.08
SMG1-213ENST00000567737 KCTD17Q8N5Z5 321 aa14.58□□□□□ -0.08
SMG1-213ENST00000567737 DCBLD1Q8N8Z6 715 aa14.58□□□□□ -0.08
SMG1-213ENST00000567737 NECAB1Q8N987 351 aa14.58□□□□□ -0.08
SMG1-213ENST00000567737 NSUN7Q8NE18 718 aaKnown RBP14.58□□□□□ -0.08
SMG1-213ENST00000567737 RFFLQ8WZ73 363 aa14.58□□□□□ -0.08
SMG1-213ENST00000567737 DPH1Q9BZG8 443 aa14.58□□□□□ -0.08
SMG1-213ENST00000567737 TRIM9Q9C026 710 aa14.58□□□□□ -0.08
SMG1-213ENST00000567737 CCSER2Q9H7U1 834 aa14.58□□□□□ -0.08
SMG1-213ENST00000567737 ADAMTS1Q9UHI8 967 aa14.58□□□□□ -0.08
SMG1-213ENST00000567737 LSM7Q9UK45 103 aaKnown RBP14.58□□□□□ -0.08
SMG1-213ENST00000567737 USP9XQ93008 2570 aaPredicted RBP14.57□□□□□ -0.08
SMG1-213ENST00000567737 MYLKQ15746 1914 aa14.57□□□□□ -0.08
SMG1-213ENST00000567737 VILLO15195 856 aa14.57□□□□□ -0.08
SMG1-213ENST00000567737 EPB41L2O43491 1005 aaKnown RBP14.57□□□□□ -0.08
SMG1-213ENST00000567737 JAK2O60674 1132 aa14.57□□□□□ -0.08
SMG1-213ENST00000567737 SEMA4FO95754 770 aa14.57□□□□□ -0.08
SMG1-213ENST00000567737 GP1BBP13224 206 aa14.57□□□□□ -0.08
SMG1-213ENST00000567737 BCAT1P54687 386 aa14.57□□□□□ -0.08
SMG1-213ENST00000567737 INSM1Q01101 510 aaPredicted RBP14.57□□□□□ -0.08
SMG1-213ENST00000567737 GNL2Q13823 731 aaKnown RBP14.57□□□□□ -0.08
SMG1-213ENST00000567737 MDH1BQ5I0G3 518 aa14.57□□□□□ -0.08
SMG1-213ENST00000567737 PRAMEF14Q5SWL7 426 aa14.57□□□□□ -0.08
SMG1-213ENST00000567737 KIAA1614Q5VZ46 1190 aa14.57□□□□□ -0.08
SMG1-213ENST00000567737 SAP25Q8TEE9 199 aa14.57□□□□□ -0.08
SMG1-213ENST00000567737 KBTBD7Q8WVZ9 684 aa14.57□□□□□ -0.08
SMG1-213ENST00000567737 POMGNT1Q8WZA1 660 aa14.57□□□□□ -0.08
SMG1-213ENST00000567737 BHMTQ93088 406 aa14.57□□□□□ -0.08
SMG1-213ENST00000567737 GTF3C6Q969F1 213 aa14.57□□□□□ -0.08
SMG1-213ENST00000567737 CDK5RAP3Q96JB5 506 aa14.57□□□□□ -0.08
SMG1-213ENST00000567737 PLIN2Q99541 437 aa14.57□□□□□ -0.08
SMG1-213ENST00000567737 REEP2Q9BRK0 252 aa14.57□□□□□ -0.08
SMG1-213ENST00000567737 BTBD1Q9H0C5 482 aa14.57□□□□□ -0.08
SMG1-213ENST00000567737 LHX5Q9H2C1 402 aa14.57□□□□□ -0.08
SMG1-213ENST00000567737 FOXP1Q9H334 677 aaPredicted RBP14.57□□□□□ -0.08
SMG1-213ENST00000567737 PARVGQ9HBI0 331 aa14.57□□□□□ -0.08
SMG1-213ENST00000567737 CHORDC1Q9UHD1 332 aaPredicted RBP14.57□□□□□ -0.08
SMG1-213ENST00000567737 STYXL1Q9Y6J8 313 aa14.57□□□□□ -0.08
SMG1-213ENST00000567737 KNL1Q8NG31 2342 aa14.57□□□□□ -0.08
SMG1-213ENST00000567737 TSPAN3O60637 253 aa14.56□□□□□ -0.08
SMG1-213ENST00000567737 EPHX1P07099 455 aa14.56□□□□□ -0.08
SMG1-213ENST00000567737 CKMT2P17540 419 aa14.56□□□□□ -0.08
SMG1-213ENST00000567737 ACO1P21399 889 aaKnown RBP14.56□□□□□ -0.08
SMG1-213ENST00000567737 WNT7BP56706 349 aa14.56□□□□□ -0.08
SMG1-213ENST00000567737 GTF2BQ00403 316 aa14.56□□□□□ -0.08
SMG1-213ENST00000567737 GOLGA8FQ08AF8 430 aa14.56□□□□□ -0.08
SMG1-213ENST00000567737 GOLGA8DPQ0D2H9 430 aa14.56□□□□□ -0.08
SMG1-213ENST00000567737 ZNF234Q14588 700 aa14.56□□□□□ -0.08
SMG1-213ENST00000567737 POSTNQ15063 836 aa14.56□□□□□ -0.08
SMG1-213ENST00000567737 ANKRD1Q15327 319 aa14.56□□□□□ -0.08
SMG1-213ENST00000567737 ARSHQ5FYA8 562 aa14.56□□□□□ -0.08
SMG1-213ENST00000567737 HYIQ5T013 277 aa14.56□□□□□ -0.08
SMG1-213ENST00000567737 SNX30Q5VWJ9 437 aa14.56□□□□□ -0.08
SMG1-213ENST00000567737 DTHD1Q6ZMT9 781 aa14.56□□□□□ -0.08
SMG1-213ENST00000567737 OR2T3Q8NH03 318 aa14.56□□□□□ -0.08
SMG1-213ENST00000567737 ELOVL4Q9GZR5 314 aa14.56□□□□□ -0.08
SMG1-213ENST00000567737 ZHX3Q9H4I2 956 aa14.56□□□□□ -0.08
SMG1-213ENST00000567737 PLK2Q9NYY3 685 aa14.56□□□□□ -0.08
SMG1-213ENST00000567737 SLC27A6Q9Y2P4 619 aa14.56□□□□□ -0.08
SMG1-213ENST00000567737 UBR5O95071 2799 aaPredicted RBP14.55□□□□□ -0.08
SMG1-213ENST00000567737 MT-CO3P00414 261 aa14.55□□□□□ -0.08
SMG1-213ENST00000567737 MPOP05164 745 aa14.55□□□□□ -0.08
SMG1-213ENST00000567737 WARSP23381 471 aaKnown RBP14.55□□□□□ -0.08
SMG1-213ENST00000567737 PRKCHP24723 683 aa14.55□□□□□ -0.08
SMG1-213ENST00000567737 ARRB1P49407 418 aaPredicted RBP14.55□□□□□ -0.08
SMG1-213ENST00000567737 CACNA2D1P54289 1103 aa14.55□□□□□ -0.08
SMG1-213ENST00000567737 ERVPABLB-1P60509 514 aa14.55□□□□□ -0.08
SMG1-213ENST00000567737 RACK1P63244 317 aaKnown RBP14.55□□□□□ -0.08
SMG1-213ENST00000567737 GABREP78334 506 aa14.55□□□□□ -0.08
SMG1-213ENST00000567737 SCARA3Q6AZY7 606 aa14.55□□□□□ -0.08
SMG1-213ENST00000567737 CXorf38Q8TB03 319 aa14.55□□□□□ -0.08
SMG1-213ENST00000567737 FAM213AQ9BRX8 229 aa14.55□□□□□ -0.08
SMG1-213ENST00000567737 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms