RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 SPTLC1O15269 473 aa18.39■□□□□ 0.53
CMTM3-214ENST00000567572 TGDSO95455 350 aa18.39■□□□□ 0.53
CMTM3-214ENST00000567572 MT-ND3P03897 115 aa18.39■□□□□ 0.53
CMTM3-214ENST00000567572 CTSHP09668 335 aa18.39■□□□□ 0.53
CMTM3-214ENST00000567572 DHRS4L1P0CG22 281 aa18.39■□□□□ 0.53
CMTM3-214ENST00000567572 MAP2K2P36507 400 aa18.39■□□□□ 0.53
CMTM3-214ENST00000567572 ATP11AP98196 1134 aa18.39■□□□□ 0.53
CMTM3-214ENST00000567572 SLC18A2Q05940 514 aa18.39■□□□□ 0.53
CMTM3-214ENST00000567572 TAF5Q15542 800 aa18.39■□□□□ 0.53
CMTM3-214ENST00000567572 OLFML1Q6UWY5 402 aa18.39■□□□□ 0.53
CMTM3-214ENST00000567572 LIMS2Q7Z4I7 341 aa18.39■□□□□ 0.53
CMTM3-214ENST00000567572 TMEM110Q86TL2 294 aa18.39■□□□□ 0.53
CMTM3-214ENST00000567572 C12orf29Q8N999 325 aa18.39■□□□□ 0.53
CMTM3-214ENST00000567572 MCUQ8NE86 351 aa18.39■□□□□ 0.53
CMTM3-214ENST00000567572 ERP27Q96DN0 273 aa18.39■□□□□ 0.53
CMTM3-214ENST00000567572 KLC2Q9H0B6 622 aa18.39■□□□□ 0.53
CMTM3-214ENST00000567572 SAR1AQ9NR31 198 aa18.39■□□□□ 0.53
CMTM3-214ENST00000567572 CHST12Q9NRB3 414 aa18.39■□□□□ 0.53
CMTM3-214ENST00000567572 TCRBV9S1A1TA0A576 114 aa18.39■□□□□ 0.53
CMTM3-214ENST00000567572 KPNA7A9QM74 516 aa18.39■□□□□ 0.53
CMTM3-214ENST00000567572 H7C0C1 242 aa18.39■□□□□ 0.53
CMTM3-214ENST00000567572 PFKMP08237 780 aa18.39■□□□□ 0.53
CMTM3-214ENST00000567572 INHBAP08476 426 aa18.39■□□□□ 0.53
CMTM3-214ENST00000567572 KRT16P08779 473 aa18.39■□□□□ 0.53
CMTM3-214ENST00000567572 ZFXP17010 805 aaPredicted RBP18.39■□□□□ 0.53
CMTM3-214ENST00000567572 SDC4P31431 198 aa18.39■□□□□ 0.53
CMTM3-214ENST00000567572 ELK3P41970 407 aa18.39■□□□□ 0.53
CMTM3-214ENST00000567572 ATP5OP48047 213 aa18.39■□□□□ 0.53
CMTM3-214ENST00000567572 SLC6A3Q01959 620 aa18.39■□□□□ 0.53
CMTM3-214ENST00000567572 PTK7Q13308 1070 aa18.39■□□□□ 0.53
CMTM3-214ENST00000567572 EFTUD2Q15029 972 aaKnown RBP eCLIP18.39■□□□□ 0.53
CMTM3-214ENST00000567572 GOLGA7BQ2TAP0 167 aa18.39■□□□□ 0.53
CMTM3-214ENST00000567572 OTOAQ7RTW8 1153 aa18.39■□□□□ 0.53
CMTM3-214ENST00000567572 CDKL3Q8IVW4 592 aaPredicted RBP18.39■□□□□ 0.53
CMTM3-214ENST00000567572 PLD5Q8N7P1 536 aa18.39■□□□□ 0.53
CMTM3-214ENST00000567572 UBA3Q8TBC4 463 aa18.39■□□□□ 0.53
CMTM3-214ENST00000567572 KBTBD7Q8WVZ9 684 aa18.39■□□□□ 0.53
CMTM3-214ENST00000567572 TUBB6Q9BUF5 446 aa18.39■□□□□ 0.53
CMTM3-214ENST00000567572 PRDM16Q9HAZ2 1276 aa18.39■□□□□ 0.53
CMTM3-214ENST00000567572 USP29Q9HBJ7 922 aa18.39■□□□□ 0.53
CMTM3-214ENST00000567572 GOLGA2P5Q9HBQ8 144 aa18.39■□□□□ 0.53
CMTM3-214ENST00000567572 ETNK1Q9HBU6 452 aa18.39■□□□□ 0.53
CMTM3-214ENST00000567572 SLCO1B3Q9NPD5 702 aa18.39■□□□□ 0.53
CMTM3-214ENST00000567572 CHMP2BQ9UQN3 213 aa18.39■□□□□ 0.53
CMTM3-214ENST00000567572 PTPN9P43378 593 aa18.38■□□□□ 0.53
CMTM3-214ENST00000567572 NEK3P51956 506 aa18.38■□□□□ 0.53
CMTM3-214ENST00000567572 BCAR1P56945 870 aa18.38■□□□□ 0.53
CMTM3-214ENST00000567572 CCDC14Q49A88 953 aa18.38■□□□□ 0.53
CMTM3-214ENST00000567572 TRNP1Q6NT89 227 aa18.38■□□□□ 0.53
CMTM3-214ENST00000567572 DPH6Q7L8W6 267 aa18.38■□□□□ 0.53
CMTM3-214ENST00000567572 ACOT1Q86TX2 421 aa18.38■□□□□ 0.53
CMTM3-214ENST00000567572 ZNF276Q8N554 614 aa18.38■□□□□ 0.53
CMTM3-214ENST00000567572 PCSK9Q8NBP7 692 aaKnown RBP18.38■□□□□ 0.53
CMTM3-214ENST00000567572 TCP10LQ8TDR4 215 aa18.38■□□□□ 0.53
CMTM3-214ENST00000567572 SPOCK2Q92563 424 aa18.38■□□□□ 0.53
CMTM3-214ENST00000567572 PPP1R10Q96QC0 940 aaKnown RBP18.38■□□□□ 0.53
CMTM3-214ENST00000567572 DNAI2Q9GZS0 605 aa18.38■□□□□ 0.53
CMTM3-214ENST00000567572 C10orf88Q9H8K7 445 aa18.38■□□□□ 0.53
CMTM3-214ENST00000567572 FAM105AQ9NUU6 356 aa18.38■□□□□ 0.53
CMTM3-214ENST00000567572 MKS1Q9NXB0 559 aa18.38■□□□□ 0.53
CMTM3-214ENST00000567572 HESX1Q9UBX0 185 aa18.38■□□□□ 0.53
CMTM3-214ENST00000567572 KBTBD13C9JR72 458 aa18.37■□□□□ 0.53
CMTM3-214ENST00000567572 ADRA1DP25100 572 aa18.37■□□□□ 0.53
CMTM3-214ENST00000567572 LRPAP1P30533 357 aa18.37■□□□□ 0.53
CMTM3-214ENST00000567572 TAF6P49848 677 aa18.37■□□□□ 0.53
CMTM3-214ENST00000567572 PPP1R26Q5T8A7 1209 aaPredicted RBP18.37■□□□□ 0.53
CMTM3-214ENST00000567572 LGSNQ5TDP6 509 aa18.37■□□□□ 0.53
CMTM3-214ENST00000567572 ARHGAP17Q68EM7 881 aa18.37■□□□□ 0.53
CMTM3-214ENST00000567572 SLC26A11Q86WA9 606 aa18.37■□□□□ 0.53
CMTM3-214ENST00000567572 ZFP42Q96MM3 310 aa18.37■□□□□ 0.53
CMTM3-214ENST00000567572 ANKRD27Q96NW4 1050 aa18.37■□□□□ 0.53
CMTM3-214ENST00000567572 PCDH18Q9HCL0 1135 aa18.37■□□□□ 0.53
CMTM3-214ENST00000567572 CREBZFQ9NS37 354 aa18.37■□□□□ 0.53
CMTM3-214ENST00000567572 NOP53Q9NZM5 478 aaKnown RBP18.37■□□□□ 0.53
CMTM3-214ENST00000567572 KLF11O14901 512 aa18.37■□□□□ 0.53
CMTM3-214ENST00000567572 LPXNO60711 386 aa18.37■□□□□ 0.53
CMTM3-214ENST00000567572 ZBED1O96006 694 aa18.37■□□□□ 0.53
CMTM3-214ENST00000567572 MMRN1Q13201 1228 aa18.37■□□□□ 0.53
CMTM3-214ENST00000567572 SV2CQ496J9 727 aa18.37■□□□□ 0.53
CMTM3-214ENST00000567572 ZC3H18Q86VM9 953 aaKnown RBP18.37■□□□□ 0.53
CMTM3-214ENST00000567572 TTC30AQ86WT1 665 aa18.37■□□□□ 0.53
CMTM3-214ENST00000567572 OR6B3Q8NGW1 331 aa18.37■□□□□ 0.53
CMTM3-214ENST00000567572 CD99L2Q8TCZ2 262 aa18.37■□□□□ 0.53
CMTM3-214ENST00000567572 LNPEPQ9UIQ6 1025 aa18.37■□□□□ 0.53
CMTM3-214ENST00000567572 MEIS3P2A8K0S8 358 aa18.36■□□□□ 0.53
CMTM3-214ENST00000567572 MYCNP04198 464 aaPredicted RBP18.36■□□□□ 0.53
CMTM3-214ENST00000567572 FGFR1P11362 822 aa18.36■□□□□ 0.53
CMTM3-214ENST00000567572 IL4RP24394 825 aa18.36■□□□□ 0.53
CMTM3-214ENST00000567572 PRKCHP24723 683 aa18.36■□□□□ 0.53
CMTM3-214ENST00000567572 HOXD10P28358 340 aa18.36■□□□□ 0.53
CMTM3-214ENST00000567572 ETV4P43268 484 aa18.36■□□□□ 0.53
CMTM3-214ENST00000567572 NR2C2P49116 596 aa18.36■□□□□ 0.53
CMTM3-214ENST00000567572 YWHAZP63104 245 aaKnown RBP18.36■□□□□ 0.53
CMTM3-214ENST00000567572 C15orf59Q2T9L4 293 aaPredicted RBP18.36■□□□□ 0.53
CMTM3-214ENST00000567572 TTC39BQ5VTQ0 682 aaPredicted RBP18.36■□□□□ 0.53
CMTM3-214ENST00000567572 NLRP9Q7RTR0 991 aa18.36■□□□□ 0.53
CMTM3-214ENST00000567572 TRIM42Q8IWZ5 723 aa18.36■□□□□ 0.53
CMTM3-214ENST00000567572 PQLC3Q8N755 202 aa18.36■□□□□ 0.53
CMTM3-214ENST00000567572 GSTCDQ8NEC7 633 aa18.36■□□□□ 0.53
CMTM3-214ENST00000567572 SH3TC2Q8TF17 1288 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms