RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 AMPD2Q01433 879 aa12.7□□□□□ -0.38
SF3B3-208ENST00000567250 RING1Q06587 406 aa12.7□□□□□ -0.38
SF3B3-208ENST00000567250 MTA1Q13330 715 aa12.7□□□□□ -0.38
SF3B3-208ENST00000567250 TRIP4Q15650 581 aaPredicted RBP12.7□□□□□ -0.38
SF3B3-208ENST00000567250 DCAF6Q58WW2 860 aa12.7□□□□□ -0.38
SF3B3-208ENST00000567250 NUGGCQ68CJ6 796 aa12.7□□□□□ -0.38
SF3B3-208ENST00000567250 DNAJC24Q6P3W2 148 aa12.7□□□□□ -0.38
SF3B3-208ENST00000567250 UNC45BQ8IWX7 931 aa12.7□□□□□ -0.38
SF3B3-208ENST00000567250 DEFB106AQ8N104 65 aa12.7□□□□□ -0.38
SF3B3-208ENST00000567250 DQX1Q8TE96 717 aaKnown RBP12.7□□□□□ -0.38
SF3B3-208ENST00000567250 EDAQ92838 391 aa12.7□□□□□ -0.38
SF3B3-208ENST00000567250 EXOC4Q96A65 974 aa12.7□□□□□ -0.38
SF3B3-208ENST00000567250 PIWIL1Q96J94 861 aaKnown RBP12.7□□□□□ -0.38
SF3B3-208ENST00000567250 FAM204AQ9H8W3 233 aa12.7□□□□□ -0.38
SF3B3-208ENST00000567250 METTL5Q9NRN9 209 aaKnown RBP12.7□□□□□ -0.38
SF3B3-208ENST00000567250 ARHGAP20Q9P2F6 1191 aa12.7□□□□□ -0.38
SF3B3-208ENST00000567250 IMPACTQ9P2X3 320 aa12.7□□□□□ -0.38
SF3B3-208ENST00000567250 WNT16Q9UBV4 365 aa12.7□□□□□ -0.38
SF3B3-208ENST00000567250 ADAMTS1Q9UHI8 967 aa12.7□□□□□ -0.38
SF3B3-208ENST00000567250 NAALADL1Q9UQQ1 740 aa12.7□□□□□ -0.38
SF3B3-208ENST00000567250 PAXBP1Q9Y5B6 917 aa12.7□□□□□ -0.38
SF3B3-208ENST00000567250 SCINQ9Y6U3 715 aa12.7□□□□□ -0.38
SF3B3-208ENST00000567250 MIA3Q5JRA6 1907 aa12.7□□□□□ -0.38
SF3B3-208ENST00000567250 TRIOO75962 3097 aa12.69□□□□□ -0.38
SF3B3-208ENST00000567250 TMCO5BA8MYB1 307 aa12.69□□□□□ -0.38
SF3B3-208ENST00000567250 IRAK2O43187 625 aa12.69□□□□□ -0.38
SF3B3-208ENST00000567250 NARSO43776 548 aaKnown RBP12.69□□□□□ -0.38
SF3B3-208ENST00000567250 AKR1B10O60218 316 aa12.69□□□□□ -0.38
SF3B3-208ENST00000567250 GRAP2O75791 330 aa12.69□□□□□ -0.38
SF3B3-208ENST00000567250 STC2O76061 302 aa12.69□□□□□ -0.38
SF3B3-208ENST00000567250 LATS1O95835 1130 aa12.69□□□□□ -0.38
SF3B3-208ENST00000567250 TRUB2O95900 331 aaKnown RBP12.69□□□□□ -0.38
SF3B3-208ENST00000567250 APOEP02649 317 aa12.69□□□□□ -0.38
SF3B3-208ENST00000567250 PLEKP08567 350 aaPredicted RBP12.69□□□□□ -0.38
SF3B3-208ENST00000567250 SLC2A3P11169 496 aa12.69□□□□□ -0.38
SF3B3-208ENST00000567250 MATKP42679 507 aa12.69□□□□□ -0.38
SF3B3-208ENST00000567250 TBX4P57082 545 aa12.69□□□□□ -0.38
SF3B3-208ENST00000567250 GPC5P78333 572 aa12.69□□□□□ -0.38
SF3B3-208ENST00000567250 ZXDBP98169 803 aa12.69□□□□□ -0.38
SF3B3-208ENST00000567250 PRKCQQ04759 706 aa12.69□□□□□ -0.38
SF3B3-208ENST00000567250 NR1H3Q13133 447 aa12.69□□□□□ -0.38
SF3B3-208ENST00000567250 ITPRIPL2Q3MIP1 535 aa12.69□□□□□ -0.38
SF3B3-208ENST00000567250 C2CD6Q53TS8 623 aa12.69□□□□□ -0.38
SF3B3-208ENST00000567250 HTR3DQ70Z44 454 aa12.69□□□□□ -0.38
SF3B3-208ENST00000567250 TAC4Q86UU9 113 aa12.69□□□□□ -0.38
SF3B3-208ENST00000567250 MCOLN2Q8IZK6 566 aa12.69□□□□□ -0.38
SF3B3-208ENST00000567250 SHDQ96IW2 340 aa12.69□□□□□ -0.38
SF3B3-208ENST00000567250 CCDC42Q96M95 316 aa12.69□□□□□ -0.38
SF3B3-208ENST00000567250 FAM83CQ9BQN1 747 aa12.69□□□□□ -0.38
SF3B3-208ENST00000567250 GRPEL1Q9HAV7 217 aa12.69□□□□□ -0.38
SF3B3-208ENST00000567250 ARHGEF3Q9NR81 526 aa12.69□□□□□ -0.38
SF3B3-208ENST00000567250 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.69□□□□□ -0.385e-8■■■□□ 16.8
SF3B3-208ENST00000567250 SFMBT1Q9UHJ3 866 aa12.69□□□□□ -0.38
SF3B3-208ENST00000567250 TLR6Q9Y2C9 796 aa12.69□□□□□ -0.38
SF3B3-208ENST00000567250 WNT6Q9Y6F9 365 aa12.69□□□□□ -0.38
SF3B3-208ENST00000567250 FAM170AA1A519 330 aa12.68□□□□□ -0.38
SF3B3-208ENST00000567250 PI4K2BG5E9Z4 385 aa12.68□□□□□ -0.38
SF3B3-208ENST00000567250 ARNTLO00327 626 aa12.68□□□□□ -0.38
SF3B3-208ENST00000567250 MSI1O43347 362 aaKnown RBP12.68□□□□□ -0.38
SF3B3-208ENST00000567250 ADH1CP00326 375 aa12.68□□□□□ -0.38
SF3B3-208ENST00000567250 FYNP06241 537 aa12.68□□□□□ -0.38
SF3B3-208ENST00000567250 HMBSP08397 361 aa12.68□□□□□ -0.38
SF3B3-208ENST00000567250 KRT3P12035 628 aa12.68□□□□□ -0.38
SF3B3-208ENST00000567250 GLULP15104 373 aa12.68□□□□□ -0.38
SF3B3-208ENST00000567250 CORO1AP31146 461 aaKnown RBP12.68□□□□□ -0.38
SF3B3-208ENST00000567250 SDC4P31431 198 aa12.68□□□□□ -0.38
SF3B3-208ENST00000567250 CHKAP35790 457 aa12.68□□□□□ -0.38
SF3B3-208ENST00000567250 EIF4A3P38919 411 aaKnown RBP12.68□□□□□ -0.38
SF3B3-208ENST00000567250 SULT1E1P49888 294 aa12.68□□□□□ -0.38
SF3B3-208ENST00000567250 MLLT6P55198 1093 aaPredicted RBP12.68□□□□□ -0.38
SF3B3-208ENST00000567250 RNASE9P60153 205 aaKnown RBP12.68□□□□□ -0.38
SF3B3-208ENST00000567250 PTP4A2Q12974 167 aa12.68□□□□□ -0.38
SF3B3-208ENST00000567250 RUNX3Q13761 415 aa12.68□□□□□ -0.38
SF3B3-208ENST00000567250 GSE1Q14687 1217 aa12.68□□□□□ -0.38
SF3B3-208ENST00000567250 SLC18A3Q16572 532 aa12.68□□□□□ -0.38
SF3B3-208ENST00000567250 EML3Q32P44 896 aa12.68□□□□□ -0.38
SF3B3-208ENST00000567250 SYPL2Q5VXT5 272 aa12.68□□□□□ -0.38
SF3B3-208ENST00000567250 DCUN1D2Q6PH85 259 aa12.68□□□□□ -0.38
SF3B3-208ENST00000567250 WDR59Q6PJI9 974 aa12.68□□□□□ -0.38
SF3B3-208ENST00000567250 SND1Q7KZF4 910 aaKnown RBP eCLIP12.68□□□□□ -0.38
SF3B3-208ENST00000567250 TC2NQ8N9U0 490 aa12.68□□□□□ -0.38
SF3B3-208ENST00000567250 OLIG1Q8TAK6 271 aa12.68□□□□□ -0.38
SF3B3-208ENST00000567250 RIN3Q8TB24 985 aa12.68□□□□□ -0.38
SF3B3-208ENST00000567250 ANP32BQ92688 251 aaKnown RBP12.68□□□□□ -0.38
SF3B3-208ENST00000567250 ZNF653Q96CK0 615 aa12.68□□□□□ -0.38
SF3B3-208ENST00000567250 ZFYVE19Q96K21 471 aa12.68□□□□□ -0.38
SF3B3-208ENST00000567250 LRRC3BQ96PB8 259 aa12.68□□□□□ -0.38
SF3B3-208ENST00000567250 PANX2Q96RD6 677 aa12.68□□□□□ -0.38
SF3B3-208ENST00000567250 ISCUQ9H1K1 167 aa12.68□□□□□ -0.38
SF3B3-208ENST00000567250 EBF3Q9H4W6 596 aa12.68□□□□□ -0.38
SF3B3-208ENST00000567250 C8orf33Q9H7E9 229 aaPredicted RBP12.68□□□□□ -0.38
SF3B3-208ENST00000567250 MRPL47Q9HD33 250 aaKnown RBP12.68□□□□□ -0.38
SF3B3-208ENST00000567250 GKN1Q9NS71 199 aa12.68□□□□□ -0.38
SF3B3-208ENST00000567250 PARVAQ9NVD7 372 aa12.68□□□□□ -0.38
SF3B3-208ENST00000567250 DDIT4Q9NX09 232 aa12.68□□□□□ -0.38
SF3B3-208ENST00000567250 A0A087X0T9 212 aa12.67□□□□□ -0.38
SF3B3-208ENST00000567250 M0QYT0 321 aa12.67□□□□□ -0.38
SF3B3-208ENST00000567250 F9P00740 461 aa12.67□□□□□ -0.38
SF3B3-208ENST00000567250 IGLV3-25P01717 112 aa12.67□□□□□ -0.38
SF3B3-208ENST00000567250 IGLV3-27P01718 113 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms