RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 FAM217BQ9NTX9 383 aaPredicted RBP6.16□□□□□ -1.42
CNOT1-211ENST00000567188 DDX56Q9NY93 547 aaKnown RBP6.16□□□□□ -1.42
CNOT1-211ENST00000567188 PTCH2Q9Y6C5 1203 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 CXCL11O14625 94 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 PHGDHO43175 533 aaKnown RBP6.16□□□□□ -1.42
CNOT1-211ENST00000567188 SERPINH1P50454 418 aaKnown RBP6.16□□□□□ -1.42
CNOT1-211ENST00000567188 AKR1D1P51857 326 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 ATP2C1P98194 919 aaPredicted RBP6.16□□□□□ -1.42
CNOT1-211ENST00000567188 SLC7A5Q01650 507 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 RNF219Q5W0B1 726 aaPredicted RBP6.16□□□□□ -1.42
CNOT1-211ENST00000567188 GPAT2Q6NUI2 795 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 MICU2Q8IYU8 434 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 TMEM130Q8N3G9 435 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 OSMRQ99650 979 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 R3HDMLQ9H3Y0 253 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 TRIM10Q9UDY6 481 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 KLHL3Q9UH77 587 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 APOA4P06727 396 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 SUPT20HL2P0C7V6 817 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 STIP1P31948 543 aaKnown RBP6.16□□□□□ -1.42
CNOT1-211ENST00000567188 MORF4L2Q15014 288 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 EFTUD2Q15029 972 aaKnown RBP eCLIP6.16□□□□□ -1.427e-7■■□□□ 13.7
CNOT1-211ENST00000567188 PUS10Q3MIT2 529 aaKnown RBP6.16□□□□□ -1.42
CNOT1-211ENST00000567188 ADAT2Q7Z6V5 191 aaKnown RBP6.16□□□□□ -1.42
CNOT1-211ENST00000567188 METTL23Q86XA0 190 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 SH2D3CQ8N5H7 860 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 WDR36Q8NI36 951 aaKnown RBP6.16□□□□□ -1.42
CNOT1-211ENST00000567188 KATNAL1Q9BW62 490 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 CCSER1Q9C0I3 900 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 TRABDQ9H4I3 376 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 SUN2Q9UH99 717 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 PCDHGC5Q9Y5F6 944 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 SRGAP2O75044 1071 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 SRP72O76094 671 aaKnown RBP6.16□□□□□ -1.42
CNOT1-211ENST00000567188 ATP1A1P05023 1023 aaKnown RBP6.16□□□□□ -1.42
CNOT1-211ENST00000567188 SFNP31947 248 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 PHKA2P46019 1235 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 COPAP53621 1224 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 MAP2K5Q13163 448 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 USP49Q70CQ1 688 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 ARHGEF19Q8IW93 802 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 OR6B3Q8NGW1 331 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 POP5Q969H6 163 aaKnown RBP6.16□□□□□ -1.42
CNOT1-211ENST00000567188 TP53INP1Q96A56 240 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 UQCC2Q9BRT2 126 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 SLC6A15Q9H2J7 730 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 TBC1D22BQ9NU19 505 aa6.16□□□□□ -1.42
CNOT1-211ENST00000567188 BAZ2BQ9UIF8 2168 aaKnown RBP6.16□□□□□ -1.42
CNOT1-211ENST00000567188 EML1O00423 815 aa6.15□□□□□ -1.42
CNOT1-211ENST00000567188 CES2O00748 559 aa6.15□□□□□ -1.42
CNOT1-211ENST00000567188 FGGP02679 453 aa6.15□□□□□ -1.42
CNOT1-211ENST00000567188 PAMP19021 973 aa6.15□□□□□ -1.42
CNOT1-211ENST00000567188 TAC1P20366 129 aa6.15□□□□□ -1.42
CNOT1-211ENST00000567188 PSEN2P49810 448 aa6.15□□□□□ -1.42
CNOT1-211ENST00000567188 CSE1LP55060 971 aaKnown RBP6.15□□□□□ -1.42
CNOT1-211ENST00000567188 GRB10Q13322 594 aa6.15□□□□□ -1.42
CNOT1-211ENST00000567188 TRIP13Q15645 432 aaPredicted RBP6.15□□□□□ -1.42
CNOT1-211ENST00000567188 RYBPQ8N488 228 aaPredicted RBP6.15□□□□□ -1.42
CNOT1-211ENST00000567188 MTMR14Q8NCE2 650 aa6.15□□□□□ -1.42
CNOT1-211ENST00000567188 LRRC20Q8TCA0 184 aa6.15□□□□□ -1.42
CNOT1-211ENST00000567188 BCAS3Q9H6U6 928 aa6.15□□□□□ -1.42
CNOT1-211ENST00000567188 MAN1C1Q9NR34 630 aa6.15□□□□□ -1.42
CNOT1-211ENST00000567188 CRNNQ9UBG3 495 aaPredicted RBP6.15□□□□□ -1.42
CNOT1-211ENST00000567188 PCDHA10Q9Y5I2 948 aa6.15□□□□□ -1.42
CNOT1-211ENST00000567188 MEI4A8MW99 385 aa6.15□□□□□ -1.42
CNOT1-211ENST00000567188 KPNA3O00505 521 aaPredicted RBP6.15□□□□□ -1.42
CNOT1-211ENST00000567188 RAD51BO15315 384 aa6.15□□□□□ -1.42
CNOT1-211ENST00000567188 TRMUO75648 421 aaKnown RBP6.15□□□□□ -1.42
CNOT1-211ENST00000567188 SMPD1P17405 629 aa6.15□□□□□ -1.42
CNOT1-211ENST00000567188 EIF4BP23588 611 aaKnown RBP6.15□□□□□ -1.42
CNOT1-211ENST00000567188 GPD2P43304 727 aa6.15□□□□□ -1.42
CNOT1-211ENST00000567188 CASP4P49662 377 aa6.15□□□□□ -1.42
CNOT1-211ENST00000567188 LLGL1Q15334 1064 aa6.15□□□□□ -1.42
CNOT1-211ENST00000567188 CELF3Q5SZQ8 465 aaKnown RBP6.15□□□□□ -1.42
CNOT1-211ENST00000567188 CCDC137Q6PK04 289 aaKnown RBP6.15□□□□□ -1.42
CNOT1-211ENST00000567188 C4orf22Q6V702 233 aa6.15□□□□□ -1.42
CNOT1-211ENST00000567188 NUP93Q8N1F7 819 aa6.15□□□□□ -1.42
CNOT1-211ENST00000567188 FBXL16Q8N461 479 aa6.15□□□□□ -1.42
CNOT1-211ENST00000567188 SNTG2Q9NY99 539 aa6.15□□□□□ -1.42
CNOT1-211ENST00000567188 MOSPD1Q9UJG1 213 aa6.15□□□□□ -1.42
CNOT1-211ENST00000567188 VPS4AQ9UN37 437 aa6.15□□□□□ -1.42
CNOT1-211ENST00000567188 MYMKA6NI61 221 aa6.15□□□□□ -1.42
CNOT1-211ENST00000567188 K7ERI5 159 aa6.15□□□□□ -1.42
CNOT1-211ENST00000567188 UBOX5O94941 541 aa6.15□□□□□ -1.42
CNOT1-211ENST00000567188 EPN2O95208 641 aa6.15□□□□□ -1.42
CNOT1-211ENST00000567188 CASP5P51878 434 aa6.15□□□□□ -1.42
CNOT1-211ENST00000567188 BTKQ06187 659 aa6.15□□□□□ -1.42
CNOT1-211ENST00000567188 STX5Q13190 355 aa6.15□□□□□ -1.42
CNOT1-211ENST00000567188 CDO1Q16878 200 aa6.15□□□□□ -1.42
CNOT1-211ENST00000567188 PGBD3Q8N328 593 aa6.15□□□□□ -1.42
CNOT1-211ENST00000567188 FRMD8Q9BZ67 464 aaPredicted RBP6.15□□□□□ -1.42
CNOT1-211ENST00000567188 EBF2Q9HAK2 575 aa6.15□□□□□ -1.42
CNOT1-211ENST00000567188 TRMT13Q9NUP7 481 aaKnown RBP6.15□□□□□ -1.42
CNOT1-211ENST00000567188 FKBP14Q9NWM8 211 aa6.15□□□□□ -1.42
CNOT1-211ENST00000567188 STK39Q9UEW8 545 aa6.15□□□□□ -1.42
CNOT1-211ENST00000567188 GNPTGQ9UJJ9 305 aa6.15□□□□□ -1.42
CNOT1-211ENST00000567188 TTLL3Q9Y4R7 772 aa6.15□□□□□ -1.42
CNOT1-211ENST00000567188 SOWAHBA6NEL2 793 aa6.15□□□□□ -1.43
CNOT1-211ENST00000567188 TSC22D2O75157 780 aa6.15□□□□□ -1.43
CNOT1-211ENST00000567188 UNC5CO95185 931 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms