RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 NUP205Q92621 2012 aa15.74■□□□□ 0.11
RNF40-209ENST00000566703 IGHV1OR15-9A0A0B4J2B8 117 aa15.74■□□□□ 0.11
RNF40-209ENST00000566703 GIPC1O14908 333 aa15.74■□□□□ 0.11
RNF40-209ENST00000566703 PENKP01210 267 aaPredicted RBP15.74■□□□□ 0.11
RNF40-209ENST00000566703 SERPINF2P08697 491 aa15.74■□□□□ 0.11
RNF40-209ENST00000566703 ENGP17813 658 aa15.74■□□□□ 0.11
RNF40-209ENST00000566703 ITPKAP23677 461 aa15.74■□□□□ 0.11
RNF40-209ENST00000566703 MXI1P50539 228 aa15.74■□□□□ 0.11
RNF40-209ENST00000566703 COBLL1Q53SF7 1204 aa15.74■□□□□ 0.11
RNF40-209ENST00000566703 PM20D1Q6GTS8 502 aa15.74■□□□□ 0.11
RNF40-209ENST00000566703 ARMCX6Q7L4S7 300 aa15.74■□□□□ 0.11
RNF40-209ENST00000566703 METTL3Q86U44 580 aaKnown RBP15.74■□□□□ 0.11
RNF40-209ENST00000566703 PIGZQ86VD9 579 aa15.74■□□□□ 0.11
RNF40-209ENST00000566703 SLC4A11Q8NBS3 891 aa15.74■□□□□ 0.11
RNF40-209ENST00000566703 GTPBP4Q9BZE4 634 aaKnown RBP15.74■□□□□ 0.11
RNF40-209ENST00000566703 GOLPH3LQ9H4A5 285 aa15.74■□□□□ 0.11
RNF40-209ENST00000566703 SLC32A1Q9H598 525 aa15.74■□□□□ 0.11
RNF40-209ENST00000566703 RMND1Q9NWS8 449 aa15.74■□□□□ 0.11
RNF40-209ENST00000566703 STRIP2Q9ULQ0 834 aa15.74■□□□□ 0.11
RNF40-209ENST00000566703 COQ4Q9Y3A0 265 aa15.74■□□□□ 0.11
RNF40-209ENST00000566703 MYO18AQ92614 2054 aaKnown RBP15.73■□□□□ 0.11
RNF40-209ENST00000566703 CYBBP04839 570 aa15.73■□□□□ 0.11
RNF40-209ENST00000566703 NDUFV2P19404 249 aa15.73■□□□□ 0.11
RNF40-209ENST00000566703 FKBP3Q00688 224 aaKnown RBP15.73■□□□□ 0.11
RNF40-209ENST00000566703 ZNF252P-AS1Q0IIN9 211 aa15.73■□□□□ 0.11
RNF40-209ENST00000566703 UAP1L1Q3KQV9 507 aa15.73■□□□□ 0.11
RNF40-209ENST00000566703 FYB2Q5VWT5 728 aa15.73■□□□□ 0.11
RNF40-209ENST00000566703 KIAA1211LQ6NV74 962 aa15.73■□□□□ 0.11
RNF40-209ENST00000566703 CPXM2Q8N436 756 aa15.73■□□□□ 0.11
RNF40-209ENST00000566703 UCMAQ8WVF2 138 aa15.73■□□□□ 0.11
RNF40-209ENST00000566703 TATDN2Q93075 761 aa15.73■□□□□ 0.11
RNF40-209ENST00000566703 ZNF419Q96HQ0 510 aaPredicted RBP15.73■□□□□ 0.11
RNF40-209ENST00000566703 GSDMAQ96QA5 445 aa15.73■□□□□ 0.11
RNF40-209ENST00000566703 SLC2A11Q9BYW1 496 aa15.73■□□□□ 0.11
RNF40-209ENST00000566703 RASAL2Q9UJF2 1139 aa15.73■□□□□ 0.11
RNF40-209ENST00000566703 CNOT1A5YKK6 2376 aaKnown RBP15.72■□□□□ 0.11
RNF40-209ENST00000566703 TIMM44O43615 452 aa15.72■□□□□ 0.11
RNF40-209ENST00000566703 PROS1P07225 676 aa15.72■□□□□ 0.11
RNF40-209ENST00000566703 CORO1AP31146 461 aaKnown RBP15.72■□□□□ 0.11
RNF40-209ENST00000566703 PRCPP42785 496 aa15.72■□□□□ 0.11
RNF40-209ENST00000566703 ATXN3P54252 364 aaPredicted RBP15.72■□□□□ 0.11
RNF40-209ENST00000566703 YWHAGP61981 247 aaKnown RBP eCLIP15.72■□□□□ 0.11
RNF40-209ENST00000566703 GFPT1Q06210 699 aaPredicted RBP15.72■□□□□ 0.11
RNF40-209ENST00000566703 EFEMP1Q12805 493 aa15.72■□□□□ 0.11
RNF40-209ENST00000566703 SEMA3BQ13214 749 aa15.72■□□□□ 0.11
RNF40-209ENST00000566703 ENPP2Q13822 863 aa15.72■□□□□ 0.11
RNF40-209ENST00000566703 ZC3H3Q8IXZ2 948 aaKnown RBP15.72■□□□□ 0.11
RNF40-209ENST00000566703 FOXJ1Q92949 421 aa15.72■□□□□ 0.11
RNF40-209ENST00000566703 MRGPRX1Q96LB2 322 aa15.72■□□□□ 0.11
RNF40-209ENST00000566703 TSG101Q99816 390 aa15.72■□□□□ 0.11
RNF40-209ENST00000566703 CAPN10Q9HC96 672 aa15.72■□□□□ 0.11
RNF40-209ENST00000566703 OLA1Q9NTK5 396 aaKnown RBP15.72■□□□□ 0.11
RNF40-209ENST00000566703 CACNA2D2Q9NY47 1150 aa15.72■□□□□ 0.11
RNF40-209ENST00000566703 PLK2Q9NYY3 685 aa15.72■□□□□ 0.11
RNF40-209ENST00000566703 MARCH2Q9P0N8 246 aa15.72■□□□□ 0.11
RNF40-209ENST00000566703 THAP10Q9P2Z0 257 aaPredicted RBP15.72■□□□□ 0.11
RNF40-209ENST00000566703 AGO1Q9UL18 857 aaKnown RBP15.72■□□□□ 0.11
RNF40-209ENST00000566703 KIAA1257Q9ULG3 409 aa15.72■□□□□ 0.11
RNF40-209ENST00000566703 WASF3Q9UPY6 502 aa15.72■□□□□ 0.11
RNF40-209ENST00000566703 STON1Q9Y6Q2 735 aa15.72■□□□□ 0.11
RNF40-209ENST00000566703 PLXND1Q9Y4D7 1925 aa15.71■□□□□ 0.11
RNF40-209ENST00000566703 XPO1O14980 1071 aaKnown RBP15.71■□□□□ 0.11
RNF40-209ENST00000566703 SLC16A3O15427 465 aaKnown RBP15.71■□□□□ 0.11
RNF40-209ENST00000566703 NDUFS2O75306 463 aa15.71■□□□□ 0.11
RNF40-209ENST00000566703 ZBED1O96006 694 aa15.71■□□□□ 0.11
RNF40-209ENST00000566703 CFIP05156 583 aa15.71■□□□□ 0.11
RNF40-209ENST00000566703 SYPP08247 313 aa15.71■□□□□ 0.11
RNF40-209ENST00000566703 MFAP3P55082 362 aa15.71■□□□□ 0.11
RNF40-209ENST00000566703 YWHAEP62258 255 aaKnown RBP15.71■□□□□ 0.11
RNF40-209ENST00000566703 STARD3Q14849 445 aa15.71■□□□□ 0.11
RNF40-209ENST00000566703 EIF4HQ15056 248 aaKnown RBP15.71■□□□□ 0.11
RNF40-209ENST00000566703 SYCP2LQ5T4T6 812 aa15.71■□□□□ 0.11
RNF40-209ENST00000566703 ZNF658Q5TYW1 1059 aaPredicted RBP15.71■□□□□ 0.11
RNF40-209ENST00000566703 RSRC2Q7L4I2 434 aaKnown RBP15.71■□□□□ 0.11
RNF40-209ENST00000566703 PIP4P1Q86T03 277 aa15.71■□□□□ 0.11
RNF40-209ENST00000566703 SLC41A1Q8IVJ1 513 aa15.71■□□□□ 0.11
RNF40-209ENST00000566703 FAM217AQ8IXS0 508 aa15.71■□□□□ 0.11
RNF40-209ENST00000566703 HDDC3Q8N4P3 179 aa15.71■□□□□ 0.11
RNF40-209ENST00000566703 PLD4Q96BZ4 506 aa15.71■□□□□ 0.11
RNF40-209ENST00000566703 EEF2KMTQ96G04 330 aa15.71■□□□□ 0.11
RNF40-209ENST00000566703 PIWIL1Q96J94 861 aaKnown RBP15.71■□□□□ 0.11
RNF40-209ENST00000566703 ITM2CQ9NQX7 267 aa15.71■□□□□ 0.11
RNF40-209ENST00000566703 NFE2L3Q9Y4A8 694 aa15.71■□□□□ 0.11
RNF40-209ENST00000566703 ACACBO00763 2458 aa15.71■□□□□ 0.1
RNF40-209ENST00000566703 MYH10P35580 1976 aa15.7■□□□□ 0.1
RNF40-209ENST00000566703 SLC12A8A0AV02 714 aa15.7■□□□□ 0.1
RNF40-209ENST00000566703 WASH3PC4AMC7 463 aa15.7■□□□□ 0.1
RNF40-209ENST00000566703 VDRP11473 427 aa15.7■□□□□ 0.1
RNF40-209ENST00000566703 MAPK8P45983 427 aa15.7■□□□□ 0.1
RNF40-209ENST00000566703 TKTL1P51854 596 aa15.7■□□□□ 0.1
RNF40-209ENST00000566703 BCAT1P54687 386 aa15.7■□□□□ 0.1
RNF40-209ENST00000566703 ZNF445P59923 1031 aa15.7■□□□□ 0.1
RNF40-209ENST00000566703 CUL2Q13617 745 aa15.7■□□□□ 0.1
RNF40-209ENST00000566703 HNRNPDQ14103 355 aaKnown RBP15.7■□□□□ 0.1
RNF40-209ENST00000566703 TRIP4Q15650 581 aaPredicted RBP15.7■□□□□ 0.1
RNF40-209ENST00000566703 SGO2Q562F6 1265 aa15.7■□□□□ 0.1
RNF40-209ENST00000566703 TCERG1LQ5VWI1 586 aa15.7■□□□□ 0.1
RNF40-209ENST00000566703 DENND1CQ8IV53 801 aa15.7■□□□□ 0.1
RNF40-209ENST00000566703 SMYD4Q8IYR2 804 aaPredicted RBP15.7■□□□□ 0.1
RNF40-209ENST00000566703 FMR1NBQ8N0W7 255 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms