RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 P2RY11Q96G91 374 aa13.46□□□□□ -0.25
RNF40-208ENST00000565995 IPO9Q96P70 1041 aaKnown RBP13.46□□□□□ -0.25
RNF40-208ENST00000565995 MED10Q9BTT4 135 aa13.46□□□□□ -0.25
RNF40-208ENST00000565995 TRIM9Q9C026 710 aa13.46□□□□□ -0.25
RNF40-208ENST00000565995 MKRN2Q9H000 416 aaKnown RBP13.46□□□□□ -0.25
RNF40-208ENST00000565995 CUEDC2Q9H467 287 aa13.46□□□□□ -0.25
RNF40-208ENST00000565995 GAREM1Q9H706 876 aa13.46□□□□□ -0.25
RNF40-208ENST00000565995 TM7SF3Q9NS93 570 aa13.46□□□□□ -0.25
RNF40-208ENST00000565995 OSER1Q9NX31 292 aa13.46□□□□□ -0.25
RNF40-208ENST00000565995 LSM7Q9UK45 103 aaKnown RBP13.46□□□□□ -0.25
RNF40-208ENST00000565995 PTPRQQ9UMZ3 2332 aa13.45□□□□□ -0.26
RNF40-208ENST00000565995 A0A087WV48 116 aa13.45□□□□□ -0.26
RNF40-208ENST00000565995 HHLA1C9JL84 531 aa13.45□□□□□ -0.26
RNF40-208ENST00000565995 BCAT2O15382 392 aaPredicted RBP13.45□□□□□ -0.26
RNF40-208ENST00000565995 FLRT2O43155 660 aa13.45□□□□□ -0.26
RNF40-208ENST00000565995 CILPO75339 1184 aa13.45□□□□□ -0.26
RNF40-208ENST00000565995 PENKP01210 267 aaPredicted RBP13.45□□□□□ -0.26
RNF40-208ENST00000565995 C4BPAP04003 597 aaKnown RBP13.45□□□□□ -0.26
RNF40-208ENST00000565995 MATKP42679 507 aa13.45□□□□□ -0.26
RNF40-208ENST00000565995 STARD3Q14849 445 aa13.45□□□□□ -0.26
RNF40-208ENST00000565995 E2F5Q15329 346 aa13.45□□□□□ -0.26
RNF40-208ENST00000565995 HLA-BQ31612 363 aa13.45□□□□□ -0.26
RNF40-208ENST00000565995 ZNF667Q5HYK9 610 aa13.45□□□□□ -0.26
RNF40-208ENST00000565995 DCAF12L1Q5VU92 463 aa13.45□□□□□ -0.26
RNF40-208ENST00000565995 UNC93AQ86WB7 457 aa13.45□□□□□ -0.26
RNF40-208ENST00000565995 GALNT15Q8N3T1 639 aa13.45□□□□□ -0.26
RNF40-208ENST00000565995 PARD3BQ8TEW8 1205 aa13.45□□□□□ -0.26
RNF40-208ENST00000565995 HNRNPLLQ8WVV9 542 aaKnown RBP13.45□□□□□ -0.26
RNF40-208ENST00000565995 PIWIL1Q96J94 861 aaKnown RBP13.45□□□□□ -0.26
RNF40-208ENST00000565995 NUP58Q9BVL2 599 aa13.45□□□□□ -0.26
RNF40-208ENST00000565995 GPR174Q9BXC1 333 aa13.45□□□□□ -0.26
RNF40-208ENST00000565995 NACA2Q9H009 215 aa13.45□□□□□ -0.26
RNF40-208ENST00000565995 SDCBP2Q9H190 292 aa13.45□□□□□ -0.26
RNF40-208ENST00000565995 SMYD3Q9H7B4 428 aa13.45□□□□□ -0.26
RNF40-208ENST00000565995 IL21RQ9HBE5 538 aa13.45□□□□□ -0.26
RNF40-208ENST00000565995 PNPLA8Q9NP80 782 aa13.45□□□□□ -0.26
RNF40-208ENST00000565995 OSGEPQ9NPF4 335 aa13.45□□□□□ -0.26
RNF40-208ENST00000565995 KRT82Q9NSB4 513 aa13.45□□□□□ -0.26
RNF40-208ENST00000565995 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.45□□□□□ -0.263e-6■□□□□ 9.8
RNF40-208ENST00000565995 ZNF510Q9Y2H8 683 aa13.45□□□□□ -0.26
RNF40-208ENST00000565995 RAXQ9Y2V3 346 aa13.45□□□□□ -0.26
RNF40-208ENST00000565995 ATMQ13315 3056 aa13.45□□□□□ -0.26
RNF40-208ENST00000565995 TENM4Q6N022 2769 aa13.44□□□□□ -0.26
RNF40-208ENST00000565995 MEI4A8MW99 385 aa13.44□□□□□ -0.26
RNF40-208ENST00000565995 E9PAM4 449 aa13.44□□□□□ -0.26
RNF40-208ENST00000565995 CLIC2O15247 247 aa13.44□□□□□ -0.26
RNF40-208ENST00000565995 ATXN1LP0C7T5 689 aaKnown RBP13.44□□□□□ -0.26
RNF40-208ENST00000565995 PDCP20941 246 aa13.44□□□□□ -0.26
RNF40-208ENST00000565995 COPAP53621 1224 aa13.44□□□□□ -0.26
RNF40-208ENST00000565995 MFAP3P55082 362 aa13.44□□□□□ -0.26
RNF40-208ENST00000565995 CUL4AQ13619 759 aa13.44□□□□□ -0.26
RNF40-208ENST00000565995 FYB2Q5VWT5 728 aa13.44□□□□□ -0.26
RNF40-208ENST00000565995 KIAA1324Q6UXG2 1013 aaKnown RBP13.44□□□□□ -0.26
RNF40-208ENST00000565995 ACOT1Q86TX2 421 aa13.44□□□□□ -0.26
RNF40-208ENST00000565995 TMPRSS6Q8IU80 811 aa13.44□□□□□ -0.26
RNF40-208ENST00000565995 ZCCHC9Q8N567 271 aaKnown RBP13.44□□□□□ -0.26
RNF40-208ENST00000565995 PLEKHO2Q8TD55 490 aa13.44□□□□□ -0.26
RNF40-208ENST00000565995 SETD7Q8WTS6 366 aaKnown RBP13.44□□□□□ -0.26
RNF40-208ENST00000565995 C7orf25Q9BPX7 421 aa13.44□□□□□ -0.26
RNF40-208ENST00000565995 DNMT3LQ9UJW3 386 aa13.44□□□□□ -0.26
RNF40-208ENST00000565995 FNDC3AQ9Y2H6 1198 aaKnown RBP13.44□□□□□ -0.26
RNF40-208ENST00000565995 PCDHA5Q9Y5H7 936 aa13.44□□□□□ -0.26
RNF40-208ENST00000565995 TRABD2BA6NFA1 517 aa13.43□□□□□ -0.26
RNF40-208ENST00000565995 STC2O76061 302 aa13.43□□□□□ -0.26
RNF40-208ENST00000565995 VNN1O95497 513 aa13.43□□□□□ -0.26
RNF40-208ENST00000565995 CHKAP35790 457 aa13.43□□□□□ -0.26
RNF40-208ENST00000565995 IL12RB1P42701 662 aa13.43□□□□□ -0.26
RNF40-208ENST00000565995 PSEN1P49768 467 aa13.43□□□□□ -0.26
RNF40-208ENST00000565995 CYP2J2P51589 502 aa13.43□□□□□ -0.26
RNF40-208ENST00000565995 MAP3K7CLP57077 242 aa13.43□□□□□ -0.26
RNF40-208ENST00000565995 AMPD3Q01432 767 aa13.43□□□□□ -0.26
RNF40-208ENST00000565995 SUZ12Q15022 739 aaKnown RBP13.43□□□□□ -0.26
RNF40-208ENST00000565995 SMAD1Q15797 465 aaKnown RBP13.43□□□□□ -0.26
RNF40-208ENST00000565995 PTPRNQ16849 979 aa13.43□□□□□ -0.26
RNF40-208ENST00000565995 SGSM1Q2NKQ1 1148 aa13.43□□□□□ -0.26
RNF40-208ENST00000565995 ZNF699Q32M78 642 aa13.43□□□□□ -0.26
RNF40-208ENST00000565995 FAM26FQ5R3K3 315 aa13.43□□□□□ -0.26
RNF40-208ENST00000565995 CLEC20AQ6ZU45 233 aa13.43□□□□□ -0.26
RNF40-208ENST00000565995 PDILTQ8N807 584 aa13.43□□□□□ -0.26
RNF40-208ENST00000565995 SLC2A14Q8TDB8 520 aa13.43□□□□□ -0.26
RNF40-208ENST00000565995 RHBDD1Q8TEB9 315 aa13.43□□□□□ -0.26
RNF40-208ENST00000565995 TAF4BQ92750 862 aa13.43□□□□□ -0.26
RNF40-208ENST00000565995 SIPA1Q96FS4 1042 aa13.43□□□□□ -0.26
RNF40-208ENST00000565995 HNRNPABQ99729 332 aaKnown RBP13.43□□□□□ -0.26
RNF40-208ENST00000565995 NMUR1Q9HB89 426 aa13.43□□□□□ -0.26
RNF40-208ENST00000565995 EIF2B4Q9UI10 523 aaKnown RBP13.43□□□□□ -0.26
RNF40-208ENST00000565995 MGAQ8IWI9 3026 aa13.43□□□□□ -0.26
RNF40-208ENST00000565995 VPS37CA5D8V6 355 aaPredicted RBP13.42□□□□□ -0.26
RNF40-208ENST00000565995 PAPSS1O43252 624 aaPredicted RBP13.42□□□□□ -0.26
RNF40-208ENST00000565995 TIMM44O43615 452 aa13.42□□□□□ -0.26
RNF40-208ENST00000565995 PCDHGA12O60330 932 aa13.42□□□□□ -0.26
RNF40-208ENST00000565995 PHACTR2O75167 634 aa13.42□□□□□ -0.26
RNF40-208ENST00000565995 KLKB1P03952 638 aa13.42□□□□□ -0.26
RNF40-208ENST00000565995 RPN1P04843 607 aaKnown RBP13.42□□□□□ -0.26
RNF40-208ENST00000565995 RARGP13631 454 aa13.42□□□□□ -0.26
RNF40-208ENST00000565995 CCDC130P13994 396 aa13.42□□□□□ -0.26
RNF40-208ENST00000565995 NASPP49321 788 aaPredicted RBP13.42□□□□□ -0.26
RNF40-208ENST00000565995 NCOA4Q13772 614 aa13.42□□□□□ -0.26
RNF40-208ENST00000565995 EIF4HQ15056 248 aaKnown RBP13.42□□□□□ -0.26
RNF40-208ENST00000565995 GEN1Q17RS7 908 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms