RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 PPP1R7Q15435 360 aa6.49□□□□□ -1.37
CHD9-217ENST00000565832 LRRC26Q2I0M4 334 aa6.49□□□□□ -1.37
CHD9-217ENST00000565832 SLC39A12Q504Y0 691 aa6.49□□□□□ -1.37
CHD9-217ENST00000565832 PPP6R3Q5H9R7 873 aaPredicted RBP6.49□□□□□ -1.37
CHD9-217ENST00000565832 LRRC38Q5VT99 294 aa6.49□□□□□ -1.37
CHD9-217ENST00000565832 FAM171A1Q5VUB5 890 aa6.49□□□□□ -1.37
CHD9-217ENST00000565832 ZDHHC24Q6UX98 284 aa6.49□□□□□ -1.37
CHD9-217ENST00000565832 RSPO2Q6UXX9 243 aaPredicted RBP6.49□□□□□ -1.37
CHD9-217ENST00000565832 ANKRD33Q7Z3H0 272 aa6.49□□□□□ -1.37
CHD9-217ENST00000565832 MTERF4Q7Z6M4 381 aaKnown RBP6.49□□□□□ -1.37
CHD9-217ENST00000565832 FAM131BQ86XD5 332 aa6.49□□□□□ -1.37
CHD9-217ENST00000565832 ABI1Q8IZP0 508 aa6.49□□□□□ -1.37
CHD9-217ENST00000565832 KDF1Q8NAX2 398 aaPredicted RBP6.49□□□□□ -1.37
CHD9-217ENST00000565832 OR2W6PQ8NHA6 318 aa6.49□□□□□ -1.37
CHD9-217ENST00000565832 BCL7CQ8WUZ0 217 aaPredicted RBP6.49□□□□□ -1.37
CHD9-217ENST00000565832 PIK3R5Q8WYR1 880 aa6.49□□□□□ -1.37
CHD9-217ENST00000565832 SEC14L1Q92503 715 aa6.49□□□□□ -1.37
CHD9-217ENST00000565832 SEPT8Q92599 483 aa6.49□□□□□ -1.37
CHD9-217ENST00000565832 ZNF333Q96JL9 665 aa6.49□□□□□ -1.37
CHD9-217ENST00000565832 SUSD3Q96L08 255 aa6.49□□□□□ -1.37
CHD9-217ENST00000565832 HSFY1Q96LI6 401 aa6.49□□□□□ -1.37
CHD9-217ENST00000565832 CCDC114Q96M63 670 aa6.49□□□□□ -1.37
CHD9-217ENST00000565832 PKMYT1Q99640 499 aa6.49□□□□□ -1.37
CHD9-217ENST00000565832 C11orf84Q9BUA3 381 aaPredicted RBP6.49□□□□□ -1.37
CHD9-217ENST00000565832 PLVAPQ9BX97 442 aa6.49□□□□□ -1.37
CHD9-217ENST00000565832 FTHL17Q9BXU8 183 aa6.49□□□□□ -1.37
CHD9-217ENST00000565832 LRRC4Q9HBW1 653 aa6.49□□□□□ -1.37
CHD9-217ENST00000565832 ANLNQ9NQW6 1124 aa6.49□□□□□ -1.37
CHD9-217ENST00000565832 DNAJC17Q9NVM6 304 aaKnown RBP6.49□□□□□ -1.37
CHD9-217ENST00000565832 GRHL1Q9NZI5 618 aa6.49□□□□□ -1.37
CHD9-217ENST00000565832 OGFRQ9NZT2 677 aa6.49□□□□□ -1.37
CHD9-217ENST00000565832 SCHIP1Q9P0W5 487 aaPredicted RBP6.49□□□□□ -1.37
CHD9-217ENST00000565832 NUDT5Q9UKK9 219 aa6.49□□□□□ -1.37
CHD9-217ENST00000565832 CDH9Q9ULB4 789 aa6.49□□□□□ -1.37
CHD9-217ENST00000565832 MFHAS1Q9Y4C4 1052 aa6.49□□□□□ -1.37
CHD9-217ENST00000565832 NR2E3Q9Y5X4 410 aa6.49□□□□□ -1.37
CHD9-217ENST00000565832 A6NJY4 79 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 INPPL1O15357 1258 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 PRPSAP2O60256 369 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 TJP3O95049 919 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 SYF2O95926 243 aaKnown RBP6.48□□□□□ -1.37
CHD9-217ENST00000565832 ALDH2P05091 517 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 CYP11A1P05108 521 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 KRT7P08729 469 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 SETSIPP0DME0 302 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 ACRP10323 421 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 IVDP26440 423 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 PCK1P35558 622 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 SLC11A1P49279 550 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 EPHB4P54760 987 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 FOXK2Q01167 660 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 MTM1Q13496 603 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 DPYSL3Q14195 570 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 CCNG2Q16589 344 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 DDR2Q16832 855 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 HADHQ16836 314 aaKnown RBP6.48□□□□□ -1.37
CHD9-217ENST00000565832 SYCP2LQ5T4T6 812 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 OTUD1Q5VV17 481 aaPredicted RBP6.48□□□□□ -1.37
CHD9-217ENST00000565832 C1orf228Q6PIY5 440 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 SLC26A9Q7LBE3 791 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 POLNQ7Z5Q5 900 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 ZC3H18Q86VM9 953 aaKnown RBP6.48□□□□□ -1.37
CHD9-217ENST00000565832 METTL23Q86XA0 190 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 C12orf50Q8NA57 414 aaPredicted RBP6.48□□□□□ -1.37
CHD9-217ENST00000565832 ATAD1Q8NBU5 361 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 ACTL9Q8TC94 416 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 ITPKCQ96DU7 683 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 ZDHHC18Q9NUE0 388 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 TMEM39AQ9NV64 488 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.48□□□□□ -1.373e-6■■■□□ 15.3
CHD9-217ENST00000565832 LRFN2Q9ULH4 789 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 ZNF148Q9UQR1 794 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 TRANK1O15050 2925 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 TRIM43BA6NCK2 446 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 M0QYT0 321 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 LIASO43766 372 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 RRP9O43818 475 aaKnown RBP6.48□□□□□ -1.37
CHD9-217ENST00000565832 ECEL1O95672 775 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 KRT14P02533 472 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 ADH1AP07327 375 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 COL6A1P12109 1028 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 NCAM1P13591 858 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 CSF2RAP15509 400 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 TNFRSF8P28908 595 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 PCSK1P29120 753 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 GRIK1P39086 918 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 MATKP42679 507 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 ARSEP51690 589 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 SLC8A3P57103 927 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 OTUD4Q01804 1114 aaKnown RBP6.48□□□□□ -1.37
CHD9-217ENST00000565832 BYSLQ13895 437 aaKnown RBP6.48□□□□□ -1.37
CHD9-217ENST00000565832 DHX34Q14147 1143 aaKnown RBP6.48□□□□□ -1.37
CHD9-217ENST00000565832 UAP1Q16222 522 aaPredicted RBP6.48□□□□□ -1.37
CHD9-217ENST00000565832 MAP9Q49MG5 647 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 BHLHA9Q7RTU4 235 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 GSTA5Q7RTV2 222 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 RFX6Q8HWS3 928 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 SIX6OS1Q8N1H7 587 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 ATL2Q8NHH9 583 aa6.48□□□□□ -1.37
CHD9-217ENST00000565832 URGCPQ8TCY9 931 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms