RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 C10orf76Q5T2E6 689 aa17.51■□□□□ 0.39
USB1-211ENST00000565662 MSANTD2Q6P1R3 559 aa17.51■□□□□ 0.39
USB1-211ENST00000565662 PKN3Q6P5Z2 889 aa17.51■□□□□ 0.39
USB1-211ENST00000565662 TRIM65Q6PJ69 517 aa17.51■□□□□ 0.39
USB1-211ENST00000565662 TMEM25Q86YD3 366 aa17.51■□□□□ 0.39
USB1-211ENST00000565662 PHTF2Q8N3S3 785 aa17.51■□□□□ 0.39
USB1-211ENST00000565662 IL17RCQ8NAC3 791 aa17.51■□□□□ 0.39
USB1-211ENST00000565662 NETO1Q8TDF5 533 aa17.51■□□□□ 0.39
USB1-211ENST00000565662 SLC35F5Q8WV83 523 aa17.51■□□□□ 0.39
USB1-211ENST00000565662 DDX1Q92499 740 aaKnown RBP17.51■□□□□ 0.39
USB1-211ENST00000565662 EZH1Q92800 747 aaPredicted RBP17.51■□□□□ 0.39
USB1-211ENST00000565662 NOX5Q96PH1 765 aa17.51■□□□□ 0.39
USB1-211ENST00000565662 DDX50Q9BQ39 737 aaKnown RBP17.51■□□□□ 0.39
USB1-211ENST00000565662 CFAP54Q96N23 3096 aa17.5■□□□□ 0.39
USB1-211ENST00000565662 PENKP01210 267 aaPredicted RBP17.5■□□□□ 0.39
USB1-211ENST00000565662 TPM2P07951 284 aa17.5■□□□□ 0.39
USB1-211ENST00000565662 KRT5P13647 590 aa17.5■□□□□ 0.39
USB1-211ENST00000565662 NTSR1P30989 418 aa17.5■□□□□ 0.39
USB1-211ENST00000565662 SEC13P55735 322 aa17.5■□□□□ 0.39
USB1-211ENST00000565662 RING1Q06587 406 aa17.5■□□□□ 0.39
USB1-211ENST00000565662 TRIP4Q15650 581 aaPredicted RBP17.5■□□□□ 0.39
USB1-211ENST00000565662 BSPRYQ5W0U4 402 aa17.5■□□□□ 0.39
USB1-211ENST00000565662 FAM217AQ8IXS0 508 aa17.5■□□□□ 0.39
USB1-211ENST00000565662 FAM160A2Q8N612 972 aaPredicted RBP17.5■□□□□ 0.39
USB1-211ENST00000565662 SERPINB11Q96P15 392 aa17.5■□□□□ 0.39
USB1-211ENST00000565662 RTKNQ9BST9 563 aa17.5■□□□□ 0.39
USB1-211ENST00000565662 DAAM1Q9Y4D1 1078 aa17.5■□□□□ 0.39
USB1-211ENST00000565662 CEP83Q9Y592 693 aa17.5■□□□□ 0.39
USB1-211ENST00000565662 PLXND1Q9Y4D7 1925 aa17.5■□□□□ 0.39
USB1-211ENST00000565662 MYOFQ9NZM1 2061 aa17.49■□□□□ 0.39
USB1-211ENST00000565662 RALGAPA1Q6GYQ0 2036 aa17.49■□□□□ 0.39
USB1-211ENST00000565662 SLC12A8A0AV02 714 aa17.49■□□□□ 0.39
USB1-211ENST00000565662 IRAK2O43187 625 aa17.49■□□□□ 0.39
USB1-211ENST00000565662 KLF8O95600 359 aaPredicted RBP17.49■□□□□ 0.39
USB1-211ENST00000565662 LTFP02788 710 aa17.49■□□□□ 0.39
USB1-211ENST00000565662 GNA15P30679 374 aa17.49■□□□□ 0.39
USB1-211ENST00000565662 TIE1P35590 1138 aa17.49■□□□□ 0.39
USB1-211ENST00000565662 BPIFB4P59827 614 aa17.49■□□□□ 0.39
USB1-211ENST00000565662 DMWDQ09019 674 aa17.49■□□□□ 0.39
USB1-211ENST00000565662 MPPE1Q53F39 396 aa17.49■□□□□ 0.39
USB1-211ENST00000565662 NAIF1Q69YI7 327 aaPredicted RBP17.49■□□□□ 0.39
USB1-211ENST00000565662 TPGS1Q6ZTW0 290 aa17.49■□□□□ 0.39
USB1-211ENST00000565662 RRAGAQ7L523 313 aa17.49■□□□□ 0.39
USB1-211ENST00000565662 ANKS1BQ7Z6G8 1248 aa17.49■□□□□ 0.39
USB1-211ENST00000565662 C12orf40Q86WS4 652 aa17.49■□□□□ 0.39
USB1-211ENST00000565662 ALLCQ8N6M5 410 aa17.49■□□□□ 0.39
USB1-211ENST00000565662 C12orf50Q8NA57 414 aaPredicted RBP17.49■□□□□ 0.39
USB1-211ENST00000565662 TXNDC5Q8NBS9 432 aaKnown RBP17.49■□□□□ 0.39
USB1-211ENST00000565662 AZIN2Q96A70 460 aa17.49■□□□□ 0.39
USB1-211ENST00000565662 MED15Q96RN5 788 aa17.49■□□□□ 0.39
USB1-211ENST00000565662 UBE2TQ9NPD8 197 aaPredicted RBP17.49■□□□□ 0.39
USB1-211ENST00000565662 SEMA4GQ9NTN9 838 aa17.49■□□□□ 0.39
USB1-211ENST00000565662 DLL3Q9NYJ7 618 aa17.49■□□□□ 0.39
USB1-211ENST00000565662 BCCIPQ9P287 314 aaKnown RBP eCLIP17.49■□□□□ 0.39
USB1-211ENST00000565662 STOML2Q9UJZ1 356 aa17.49■□□□□ 0.39
USB1-211ENST00000565662 FBXO10Q9UK96 956 aa17.49■□□□□ 0.39
USB1-211ENST00000565662 ATG2BQ96BY7 2078 aa17.49■□□□□ 0.39
USB1-211ENST00000565662 EML5Q05BV3 1969 aa17.48■□□□□ 0.39
USB1-211ENST00000565662 TIMM44O43615 452 aa17.48■□□□□ 0.39
USB1-211ENST00000565662 ZNF217O75362 1048 aa17.48■□□□□ 0.39
USB1-211ENST00000565662 HNRNPLP14866 589 aaKnown RBP eCLIP17.48■□□□□ 0.39
USB1-211ENST00000565662 EEF1GP26641 437 aaKnown RBP17.48■□□□□ 0.39
USB1-211ENST00000565662 SLC6A11P48066 632 aa17.48■□□□□ 0.39
USB1-211ENST00000565662 RPL34P49207 117 aaKnown RBP17.48■□□□□ 0.39
USB1-211ENST00000565662 SLC11A2P49281 568 aa17.48■□□□□ 0.39
USB1-211ENST00000565662 PGFP49763 221 aa17.48■□□□□ 0.39
USB1-211ENST00000565662 STARD3Q14849 445 aa17.48■□□□□ 0.39
USB1-211ENST00000565662 MPP7Q5T2T1 576 aa17.48■□□□□ 0.39
USB1-211ENST00000565662 SLC36A4Q6YBV0 504 aa17.48■□□□□ 0.39
USB1-211ENST00000565662 FMNL3Q8IVF7 1028 aa17.48■□□□□ 0.39
USB1-211ENST00000565662 ARHGEF19Q8IW93 802 aa17.48■□□□□ 0.39
USB1-211ENST00000565662 WFIKKN2Q8TEU8 576 aa17.48■□□□□ 0.39
USB1-211ENST00000565662 VPS45Q9NRW7 570 aa17.48■□□□□ 0.39
USB1-211ENST00000565662 C2orf42Q9NWW7 574 aa17.48■□□□□ 0.39
USB1-211ENST00000565662 AGO1Q9UL18 857 aaKnown RBP17.48■□□□□ 0.39
USB1-211ENST00000565662 SCAMP3O14828 347 aaKnown RBP17.47■□□□□ 0.39
USB1-211ENST00000565662 MDM4O15151 490 aa17.47■□□□□ 0.39
USB1-211ENST00000565662 ZNF806P0C7X5 589 aa17.47■□□□□ 0.39
USB1-211ENST00000565662 LCP1P13796 627 aa17.47■□□□□ 0.39
USB1-211ENST00000565662 HOXB2P14652 356 aa17.47■□□□□ 0.39
USB1-211ENST00000565662 BRD2P25440 801 aaKnown RBP17.47■□□□□ 0.39
USB1-211ENST00000565662 HOXD12P35452 270 aa17.47■□□□□ 0.39
USB1-211ENST00000565662 LIMK1P53667 647 aa17.47■□□□□ 0.39
USB1-211ENST00000565662 PTK2Q05397 1052 aa17.47■□□□□ 0.39
USB1-211ENST00000565662 PLK5Q496M5 336 aa17.47■□□□□ 0.39
USB1-211ENST00000565662 ADGRF1Q5T601 910 aa17.47■□□□□ 0.39
USB1-211ENST00000565662 ANO7Q6IWH7 933 aa17.47■□□□□ 0.39
USB1-211ENST00000565662 PRR23CQ6ZRP0 262 aa17.47■□□□□ 0.39
USB1-211ENST00000565662 RABEPKQ7Z6M1 372 aa17.47■□□□□ 0.39
USB1-211ENST00000565662 CREBRFQ8IUR6 639 aa17.47■□□□□ 0.39
USB1-211ENST00000565662 CHPFQ8IZ52 775 aa17.47■□□□□ 0.39
USB1-211ENST00000565662 NAT16Q8N8M0 369 aa17.47■□□□□ 0.39
USB1-211ENST00000565662 UBA3Q8TBC4 463 aa17.47■□□□□ 0.39
USB1-211ENST00000565662 KREMEN1Q96MU8 473 aa17.47■□□□□ 0.39
USB1-211ENST00000565662 MIS12Q9H081 205 aa17.47■□□□□ 0.39
USB1-211ENST00000565662 NUDT5Q9UKK9 219 aa17.47■□□□□ 0.39
USB1-211ENST00000565662 YJEFN3A6XGL0 299 aa17.46■□□□□ 0.39
USB1-211ENST00000565662 E7ENQ6 273 aa17.46■□□□□ 0.39
USB1-211ENST00000565662 THAP12O43422 761 aa17.46■□□□□ 0.39
USB1-211ENST00000565662 MBD3O95983 291 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms