RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 COBLL1Q53SF7 1204 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 FBXW10Q5XX13 1052 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 ALS2CLQ60I27 953 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 OR9Q1Q8NGQ5 310 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 TPCN2Q8NHX9 752 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 MCUR1Q96AQ8 359 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 CERS4Q9HA82 394 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 BATF3Q9NR55 127 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 SUN2Q9UH99 717 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 KIAA1257Q9ULG3 409 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 PIN4Q9Y237 131 aaKnown RBP3.47□□□□□ -1.85
CHD9-213ENST00000564845 ZBTB42B2RXF5 422 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 MYO1CO00159 1063 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 CREB3O43889 395 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 MOCS2O96007 188 aaPredicted RBP3.47□□□□□ -1.85
CHD9-213ENST00000564845 SOX5P35711 763 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 MXI1P50539 228 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 EPHB4P54760 987 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 FMO1Q01740 532 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 PDIA5Q14554 519 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 KCNB1Q14721 858 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 PCNX4Q63HM2 1172 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 C4orf33Q8N1A6 199 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 CCDC63Q8NA47 563 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 USP33Q8TEY7 942 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 CMTM5Q96DZ9 223 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 HEXIM2Q96MH2 286 aaKnown RBP3.47□□□□□ -1.85
CHD9-213ENST00000564845 KIAA1683Q9H0B3 1180 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 IRAK4Q9NWZ3 460 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 CEP72Q9P209 647 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 MCM3APO60318 1980 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 LGR5O75473 907 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 IL1R2P27930 398 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 GCKP35557 465 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 MLH1P40692 756 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 PIK3CBP42338 1070 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 SLC29A2Q14542 456 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 KBTBD12Q3ZCT8 623 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 DCLK2Q8N568 766 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 TTC9BQ8N6N2 239 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 ARRDC4Q8NCT1 418 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 CPNE2Q96FN4 548 aaPredicted RBP3.47□□□□□ -1.85
CHD9-213ENST00000564845 AGPAT1Q99943 283 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 TEX13BQ9BXU2 312 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 WWP1Q9H0M0 922 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 CACNA2D2Q9NY47 1150 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 LMCD1Q9NZU5 365 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 FBXL5Q9UKA1 691 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 CCDC195A0A1B0GUA6 201 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 PRMT2P55345 433 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 KRT76Q01546 638 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 PLOD1Q02809 727 aaPredicted RBP3.47□□□□□ -1.85
CHD9-213ENST00000564845 OVGP1Q12889 678 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 VSIG10LQ86VR7 867 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 SHKBP1Q8TBC3 707 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 MAGEC3Q8TD91 643 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 TSPAN17Q96FV3 270 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 NANSQ9NR45 359 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 A0A1W2PQC6 194 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 PRR23AA6NEV1 266 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 AREL1O15033 823 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 WDR46O15213 610 aaKnown RBP3.47□□□□□ -1.85
CHD9-213ENST00000564845 ERBB2P04626 1255 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 SERPING1P05155 500 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 CAPN1P07384 714 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 BRCC3P46736 316 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 RPS6KA1Q15418 735 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 CA9Q16790 459 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 KRT71Q3SY84 523 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 DEFB128Q7Z7B8 93 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 XXYLT1Q8NBI6 393 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 ZNF564Q8TBZ8 553 aaPredicted RBP3.47□□□□□ -1.85
CHD9-213ENST00000564845 FBXO25Q8TCJ0 367 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 FAM172AQ8WUF8 416 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 SIK2Q9H0K1 926 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 ARHGAP10A1A4S6 786 aa3.46□□□□□ -1.85
CHD9-213ENST00000564845 LIG3P49916 1009 aa3.46□□□□□ -1.85
CHD9-213ENST00000564845 MFAP3P55082 362 aa3.46□□□□□ -1.85
CHD9-213ENST00000564845 CSTF3Q12996 717 aaKnown RBP3.46□□□□□ -1.85
CHD9-213ENST00000564845 PKN2Q16513 984 aaKnown RBP3.46□□□□□ -1.85
CHD9-213ENST00000564845 DENND1BQ6P3S1 775 aa3.46□□□□□ -1.85
CHD9-213ENST00000564845 BRSK2Q8IWQ3 736 aa3.46□□□□□ -1.85
CHD9-213ENST00000564845 ACAD9Q9H845 621 aa3.46□□□□□ -1.85
CHD9-213ENST00000564845 DMAP1Q9NPF5 467 aaPredicted RBP3.46□□□□□ -1.85
CHD9-213ENST00000564845 BNIP3LO60238 219 aa3.46□□□□□ -1.85
CHD9-213ENST00000564845 NPM3O75607 178 aaKnown RBP3.46□□□□□ -1.85
CHD9-213ENST00000564845 CABYRO75952 493 aa3.46□□□□□ -1.85
CHD9-213ENST00000564845 SNAI1O95863 264 aaPredicted RBP3.46□□□□□ -1.85
CHD9-213ENST00000564845 KRT7P08729 469 aa3.46□□□□□ -1.85
CHD9-213ENST00000564845 CYP11B1P15538 503 aa3.46□□□□□ -1.85
CHD9-213ENST00000564845 DCKP27707 260 aa3.46□□□□□ -1.85
CHD9-213ENST00000564845 OAZ1P54368 228 aa3.46□□□□□ -1.85
CHD9-213ENST00000564845 MEA1Q16626 185 aa3.46□□□□□ -1.85
CHD9-213ENST00000564845 TJAP1Q5JTD0 557 aa3.46□□□□□ -1.85
CHD9-213ENST00000564845 TTC23LQ6PF05 361 aa3.46□□□□□ -1.85
CHD9-213ENST00000564845 ABHD15Q6UXT9 468 aa3.46□□□□□ -1.85
CHD9-213ENST00000564845 EPM2AIP1Q7L775 607 aaPredicted RBP3.46□□□□□ -1.85
CHD9-213ENST00000564845 CACUL1Q86Y37 369 aa3.46□□□□□ -1.85
CHD9-213ENST00000564845 WDTC1Q8N5D0 677 aa3.46□□□□□ -1.85
CHD9-213ENST00000564845 PDZD8Q8NEN9 1154 aa3.46□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms