RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 MAVSQ7Z434 540 aa21.19■□□□□ 0.98
MAP1LC3B-206ENST00000564844 FAM160B2Q86V87 743 aa21.19■□□□□ 0.98
MAP1LC3B-206ENST00000564844 C10orf107Q8IVU9 208 aa21.19■□□□□ 0.98
MAP1LC3B-206ENST00000564844 PIWIL2Q8TC59 973 aaKnown RBP21.19■□□□□ 0.98
MAP1LC3B-206ENST00000564844 TMEM165Q9HC07 324 aa21.19■□□□□ 0.98
MAP1LC3B-206ENST00000564844 FETUBQ9UGM5 382 aa21.19■□□□□ 0.98
MAP1LC3B-206ENST00000564844 DTNAQ9Y4J8 743 aa21.19■□□□□ 0.98
MAP1LC3B-206ENST00000564844 LTBP4Q8N2S1 1624 aa21.19■□□□□ 0.98
MAP1LC3B-206ENST00000564844 CLPTM1O96005 669 aa21.19■□□□□ 0.98
MAP1LC3B-206ENST00000564844 ZBED1O96006 694 aa21.19■□□□□ 0.98
MAP1LC3B-206ENST00000564844 ITGA2BP08514 1039 aa21.19■□□□□ 0.98
MAP1LC3B-206ENST00000564844 PABPC4LP0CB38 370 aaKnown RBP21.19■□□□□ 0.98
MAP1LC3B-206ENST00000564844 GALK1P51570 392 aa21.19■□□□□ 0.98
MAP1LC3B-206ENST00000564844 KRT81Q14533 505 aa21.19■□□□□ 0.98
MAP1LC3B-206ENST00000564844 KCNJ11Q14654 390 aa21.19■□□□□ 0.98
MAP1LC3B-206ENST00000564844 NADK2Q4G0N4 442 aa21.19■□□□□ 0.98
MAP1LC3B-206ENST00000564844 PABPC1LQ4VXU2 614 aaKnown RBP21.19■□□□□ 0.98
MAP1LC3B-206ENST00000564844 LGSNQ5TDP6 509 aa21.19■□□□□ 0.98
MAP1LC3B-206ENST00000564844 HAPLN3Q96S86 360 aa21.19■□□□□ 0.98
MAP1LC3B-206ENST00000564844 PXMP2Q9NR77 195 aa21.19■□□□□ 0.98
MAP1LC3B-206ENST00000564844 LZTS1Q9Y250 596 aa21.19■□□□□ 0.98
MAP1LC3B-206ENST00000564844 ADCY6O43306 1168 aa21.18■□□□□ 0.98
MAP1LC3B-206ENST00000564844 KRT38O76015 456 aa21.18■□□□□ 0.98
MAP1LC3B-206ENST00000564844 RGS7P49802 495 aa21.18■□□□□ 0.98
MAP1LC3B-206ENST00000564844 PDK1Q15118 436 aa21.18■□□□□ 0.98
MAP1LC3B-206ENST00000564844 ANGEL2Q5VTE6 544 aaKnown RBP21.18■□□□□ 0.98
MAP1LC3B-206ENST00000564844 PDPK2PQ6A1A2 396 aa21.18■□□□□ 0.98
MAP1LC3B-206ENST00000564844 TMC7Q7Z402 723 aa21.18■□□□□ 0.98
MAP1LC3B-206ENST00000564844 CGRRF1Q99675 332 aa21.18■□□□□ 0.98
MAP1LC3B-206ENST00000564844 HSFX1Q9UBD0 423 aa21.18■□□□□ 0.98
MAP1LC3B-206ENST00000564844 ASLP04424 464 aa21.18■□□□□ 0.98
MAP1LC3B-206ENST00000564844 PCSK6P29122 969 aa21.18■□□□□ 0.98
MAP1LC3B-206ENST00000564844 SESN2P58004 480 aaPredicted RBP21.18■□□□□ 0.98
MAP1LC3B-206ENST00000564844 COG7P83436 770 aa21.18■□□□□ 0.98
MAP1LC3B-206ENST00000564844 ITGA9Q13797 1035 aa21.18■□□□□ 0.98
MAP1LC3B-206ENST00000564844 CYTH1Q15438 398 aa21.18■□□□□ 0.98
MAP1LC3B-206ENST00000564844 C6orf52Q5T4I8 152 aa21.18■□□□□ 0.98
MAP1LC3B-206ENST00000564844 SESTD1Q86VW0 696 aa21.18■□□□□ 0.98
MAP1LC3B-206ENST00000564844 TFB1MQ8WVM0 346 aaKnown RBP21.18■□□□□ 0.98
MAP1LC3B-206ENST00000564844 CLMNQ96JQ2 1002 aa21.18■□□□□ 0.98
MAP1LC3B-206ENST00000564844 YDJCA8MPS7 323 aa21.18■□□□□ 0.98
MAP1LC3B-206ENST00000564844 APOEP02649 317 aa21.18■□□□□ 0.98
MAP1LC3B-206ENST00000564844 NR3C2P08235 984 aa21.18■□□□□ 0.98
MAP1LC3B-206ENST00000564844 ZNF699Q32M78 642 aa21.18■□□□□ 0.98
MAP1LC3B-206ENST00000564844 METTL25Q8N6Q8 603 aa21.18■□□□□ 0.98
MAP1LC3B-206ENST00000564844 ATP6V0A1Q93050 837 aa21.18■□□□□ 0.98
MAP1LC3B-206ENST00000564844 COPS7BQ9H9Q2 264 aaPredicted RBP21.18■□□□□ 0.98
MAP1LC3B-206ENST00000564844 THAP1Q9NVV9 213 aa21.18■□□□□ 0.98
MAP1LC3B-206ENST00000564844 AFG3L2Q9Y4W6 797 aa21.18■□□□□ 0.98
MAP1LC3B-206ENST00000564844 SLC15A5A6NIM6 579 aa21.17■□□□□ 0.98
MAP1LC3B-206ENST00000564844 ENTPD3O75355 529 aa21.17■□□□□ 0.98
MAP1LC3B-206ENST00000564844 METTL18O95568 372 aa21.17■□□□□ 0.98
MAP1LC3B-206ENST00000564844 C1QAP02745 245 aa21.17■□□□□ 0.98
MAP1LC3B-206ENST00000564844 ITGAXP20702 1163 aa21.17■□□□□ 0.98
MAP1LC3B-206ENST00000564844 PTGER2P43116 358 aa21.17■□□□□ 0.98
MAP1LC3B-206ENST00000564844 ALDH1A3P47895 512 aa21.17■□□□□ 0.98
MAP1LC3B-206ENST00000564844 CNGA3Q16281 694 aa21.17■□□□□ 0.98
MAP1LC3B-206ENST00000564844 PPM1LQ5SGD2 360 aa21.17■□□□□ 0.98
MAP1LC3B-206ENST00000564844 KLHDC10Q6PID8 442 aa21.17■□□□□ 0.98
MAP1LC3B-206ENST00000564844 FAM156AQ8NDB6 213 aa21.17■□□□□ 0.98
MAP1LC3B-206ENST00000564844 MCPH1Q8NEM0 835 aa21.17■□□□□ 0.98
MAP1LC3B-206ENST00000564844 ITFG2Q969R8 447 aa21.17■□□□□ 0.98
MAP1LC3B-206ENST00000564844 MARK4Q96L34 752 aa21.17■□□□□ 0.98
MAP1LC3B-206ENST00000564844 ZNF277Q9NRM2 450 aaPredicted RBP21.17■□□□□ 0.98
MAP1LC3B-206ENST00000564844 PHF24Q9UPV7 400 aa21.17■□□□□ 0.98
MAP1LC3B-206ENST00000564844 ASS1P00966 412 aaKnown RBP21.17■□□□□ 0.98
MAP1LC3B-206ENST00000564844 AMHP03971 560 aa21.17■□□□□ 0.98
MAP1LC3B-206ENST00000564844 ACTR2P61160 394 aa21.17■□□□□ 0.98
MAP1LC3B-206ENST00000564844 ANKRD20A4Q4UJ75 823 aa21.17■□□□□ 0.98
MAP1LC3B-206ENST00000564844 TEDDM1Q5T9Z0 273 aa21.17■□□□□ 0.98
MAP1LC3B-206ENST00000564844 SDCCAG8Q86SQ7 713 aaPredicted RBP21.17■□□□□ 0.98
MAP1LC3B-206ENST00000564844 PSAT1Q9Y617 370 aa21.17■□□□□ 0.98
MAP1LC3B-206ENST00000564844 DNAH12Q6ZR08 3092 aa21.17■□□□□ 0.98
MAP1LC3B-206ENST00000564844 TPP1O14773 563 aa21.16■□□□□ 0.98
MAP1LC3B-206ENST00000564844 KLF11O14901 512 aa21.16■□□□□ 0.98
MAP1LC3B-206ENST00000564844 VILLO15195 856 aa21.16■□□□□ 0.98
MAP1LC3B-206ENST00000564844 TFAP2AP05549 437 aa21.16■□□□□ 0.98
MAP1LC3B-206ENST00000564844 SFNP31947 248 aa21.16■□□□□ 0.98
MAP1LC3B-206ENST00000564844 IDH3AP50213 366 aa21.16■□□□□ 0.98
MAP1LC3B-206ENST00000564844 UGT2A3Q6UWM9 527 aa21.16■□□□□ 0.98
MAP1LC3B-206ENST00000564844 MCF2L2Q86YR7 1114 aa21.16■□□□□ 0.98
MAP1LC3B-206ENST00000564844 TRIM42Q8IWZ5 723 aa21.16■□□□□ 0.98
MAP1LC3B-206ENST00000564844 TWNKQ96RR1 684 aa21.16■□□□□ 0.98
MAP1LC3B-206ENST00000564844 ADPGKQ9BRR6 497 aa21.16■□□□□ 0.98
MAP1LC3B-206ENST00000564844 GPAMQ9HCL2 828 aa21.16■□□□□ 0.98
MAP1LC3B-206ENST00000564844 HERC5Q9UII4 1024 aaKnown RBP21.16■□□□□ 0.98
MAP1LC3B-206ENST00000564844 TUBB3Q13509 450 aa21.16■□□□□ 0.98
MAP1LC3B-206ENST00000564844 SCN9AQ15858 1988 aa21.16■□□□□ 0.98
MAP1LC3B-206ENST00000564844 WNK3Q9BYP7 1800 aa21.16■□□□□ 0.98
MAP1LC3B-206ENST00000564844 WDR27A2RRH5 827 aa21.15■□□□□ 0.98
MAP1LC3B-206ENST00000564844 STX16-NPEPL1H3BU86 382 aa21.15■□□□□ 0.98
MAP1LC3B-206ENST00000564844 STBD1O95210 358 aa21.15■□□□□ 0.98
MAP1LC3B-206ENST00000564844 TRUB2O95900 331 aaKnown RBP21.15■□□□□ 0.98
MAP1LC3B-206ENST00000564844 BCAR1P56945 870 aa21.15■□□□□ 0.98
MAP1LC3B-206ENST00000564844 CA9Q16790 459 aa21.15■□□□□ 0.98
MAP1LC3B-206ENST00000564844 OR6B2Q6IFH4 312 aa21.15■□□□□ 0.98
MAP1LC3B-206ENST00000564844 CMC1Q7Z7K0 106 aa21.15■□□□□ 0.98
MAP1LC3B-206ENST00000564844 ZFP28Q8NHY6 868 aa21.15■□□□□ 0.98
MAP1LC3B-206ENST00000564844 NCSTNQ92542 709 aa21.15■□□□□ 0.98
MAP1LC3B-206ENST00000564844 LENG1Q96BZ8 264 aaPredicted RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms