RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 GABRG2P18507 467 aa19.43■□□□□ 0.7
CLN6-204ENST00000564752 BMP6P22004 513 aa19.43■□□□□ 0.7
CLN6-204ENST00000564752 SHC2P98077 582 aa19.43■□□□□ 0.7
CLN6-204ENST00000564752 EGFLAMQ63HQ2 1017 aa19.43■□□□□ 0.7
CLN6-204ENST00000564752 PSAPL1Q6NUJ1 521 aa19.43■□□□□ 0.7
CLN6-204ENST00000564752 TTI2Q6NXR4 508 aa19.43■□□□□ 0.7
CLN6-204ENST00000564752 SYT12Q8IV01 421 aa19.43■□□□□ 0.7
CLN6-204ENST00000564752 ARID3AQ99856 593 aa19.43■□□□□ 0.7
CLN6-204ENST00000564752 UBXN6Q9BZV1 441 aa19.43■□□□□ 0.7
CLN6-204ENST00000564752 CD248Q9HCU0 757 aa19.43■□□□□ 0.7
CLN6-204ENST00000564752 CISHQ9NSE2 258 aa19.43■□□□□ 0.7
CLN6-204ENST00000564752 TMEM74BQ9NUR3 256 aa19.43■□□□□ 0.7
CLN6-204ENST00000564752 CLIC5Q9NZA1 410 aa19.43■□□□□ 0.7
CLN6-204ENST00000564752 COQ4Q9Y3A0 265 aa19.43■□□□□ 0.7
CLN6-204ENST00000564752 MYO18AQ92614 2054 aaKnown RBP19.42■□□□□ 0.7
CLN6-204ENST00000564752 PPP1R3GB7ZBB8 358 aa19.42■□□□□ 0.7
CLN6-204ENST00000564752 PRRT4C9JH25 899 aa19.42■□□□□ 0.7
CLN6-204ENST00000564752 STC2O76061 302 aa19.42■□□□□ 0.7
CLN6-204ENST00000564752 RALAP11233 206 aa19.42■□□□□ 0.7
CLN6-204ENST00000564752 HOXB2P14652 356 aa19.42■□□□□ 0.7
CLN6-204ENST00000564752 WASP42768 502 aa19.42■□□□□ 0.7
CLN6-204ENST00000564752 PAK1Q13153 545 aa19.42■□□□□ 0.7
CLN6-204ENST00000564752 FOXR2Q6PJQ5 311 aa19.42■□□□□ 0.7
CLN6-204ENST00000564752 TOGARAM2Q6ZUX3 1019 aa19.42■□□□□ 0.7
CLN6-204ENST00000564752 TRIML1Q8N9V2 468 aa19.42■□□□□ 0.7
CLN6-204ENST00000564752 SLC4A11Q8NBS3 891 aa19.42■□□□□ 0.7
CLN6-204ENST00000564752 TMEM176AQ96HP8 235 aa19.42■□□□□ 0.7
CLN6-204ENST00000564752 CDK5RAP1Q96SZ6 601 aaKnown RBP19.42■□□□□ 0.7
CLN6-204ENST00000564752 ACOX2Q99424 681 aa19.42■□□□□ 0.7
CLN6-204ENST00000564752 FAM124BQ9H5Z6 455 aaPredicted RBP19.42■□□□□ 0.7
CLN6-204ENST00000564752 FBXO10Q9UK96 956 aa19.42■□□□□ 0.7
CLN6-204ENST00000564752 GON4LQ3T8J9 2241 aa19.41■□□□□ 0.7
CLN6-204ENST00000564752 THADAQ6YHU6 1953 aa19.41■□□□□ 0.7
CLN6-204ENST00000564752 KLKB1P03952 638 aa19.41■□□□□ 0.7
CLN6-204ENST00000564752 DGKGP49619 791 aa19.41■□□□□ 0.7
CLN6-204ENST00000564752 NOVA1P51513 510 aaKnown RBP19.41■□□□□ 0.7
CLN6-204ENST00000564752 RAD23BP54727 409 aa19.41■□□□□ 0.7
CLN6-204ENST00000564752 TRIM61Q5EBN2 209 aa19.41■□□□□ 0.7
CLN6-204ENST00000564752 SDE2Q6IQ49 451 aa19.41■□□□□ 0.7
CLN6-204ENST00000564752 ARMCX6Q7L4S7 300 aa19.41■□□□□ 0.7
CLN6-204ENST00000564752 CHPFQ8IZ52 775 aa19.41■□□□□ 0.7
CLN6-204ENST00000564752 TATDN2Q93075 761 aa19.41■□□□□ 0.7
CLN6-204ENST00000564752 P2RY11Q96G91 374 aa19.41■□□□□ 0.7
CLN6-204ENST00000564752 GABRG3Q99928 467 aa19.41■□□□□ 0.7
CLN6-204ENST00000564752 ZNF510Q9Y2H8 683 aa19.41■□□□□ 0.7
CLN6-204ENST00000564752 USP24Q9UPU5 2620 aa19.41■□□□□ 0.7
CLN6-204ENST00000564752 GIPC1O14908 333 aa19.4■□□□□ 0.7
CLN6-204ENST00000564752 AP5Z1O43299 807 aa19.4■□□□□ 0.7
CLN6-204ENST00000564752 DPP6P42658 865 aa19.4■□□□□ 0.7
CLN6-204ENST00000564752 FMO5P49326 533 aa19.4■□□□□ 0.7
CLN6-204ENST00000564752 STX17P56962 302 aa19.4■□□□□ 0.7
CLN6-204ENST00000564752 YWHAEP62258 255 aaKnown RBP19.4■□□□□ 0.7
CLN6-204ENST00000564752 COG7P83436 770 aa19.4■□□□□ 0.7
CLN6-204ENST00000564752 LMAN2Q12907 356 aa19.4■□□□□ 0.7
CLN6-204ENST00000564752 CUL2Q13617 745 aa19.4■□□□□ 0.7
CLN6-204ENST00000564752 CAMK4Q16566 473 aa19.4■□□□□ 0.7
CLN6-204ENST00000564752 RAB41Q5JT25 222 aa19.4■□□□□ 0.7
CLN6-204ENST00000564752 SH3PXD2AQ5TCZ1 1133 aa19.4■□□□□ 0.7
CLN6-204ENST00000564752 PEAR1Q5VY43 1037 aaPredicted RBP19.4■□□□□ 0.7
CLN6-204ENST00000564752 LYSMD4Q5XG99 296 aa19.4■□□□□ 0.7
CLN6-204ENST00000564752 ARHGAP17Q68EM7 881 aa19.4■□□□□ 0.7
CLN6-204ENST00000564752 KIAA1211LQ6NV74 962 aa19.4■□□□□ 0.7
CLN6-204ENST00000564752 SLC36A4Q6YBV0 504 aa19.4■□□□□ 0.7
CLN6-204ENST00000564752 IPO4Q8TEX9 1081 aaKnown RBP19.4■□□□□ 0.7
CLN6-204ENST00000564752 NUSAP1Q9BXS6 441 aaKnown RBP19.4■□□□□ 0.7
CLN6-204ENST00000564752 PLK2Q9NYY3 685 aa19.4■□□□□ 0.7
CLN6-204ENST00000564752 CALCOCO1Q9P1Z2 691 aa19.4■□□□□ 0.7
CLN6-204ENST00000564752 PILRBQ9UKJ0 227 aa19.4■□□□□ 0.7
CLN6-204ENST00000564752 ZFHX4Q86UP3 3567 aa19.4■□□□□ 0.7
CLN6-204ENST00000564752 CEP295Q9C0D2 2601 aa19.39■□□□□ 0.7
CLN6-204ENST00000564752 NUP205Q92621 2012 aa19.39■□□□□ 0.69
CLN6-204ENST00000564752 GFRA2O00451 464 aa19.39■□□□□ 0.69
CLN6-204ENST00000564752 ZBTB24O43167 697 aaPredicted RBP19.39■□□□□ 0.69
CLN6-204ENST00000564752 PENKP01210 267 aaPredicted RBP19.39■□□□□ 0.69
CLN6-204ENST00000564752 CSRP1P21291 193 aaKnown RBP19.39■□□□□ 0.69
CLN6-204ENST00000564752 ITPKAP23677 461 aa19.39■□□□□ 0.69
CLN6-204ENST00000564752 EFEMP1Q12805 493 aa19.39■□□□□ 0.69
CLN6-204ENST00000564752 LRMPQ12912 555 aa19.39■□□□□ 0.69
CLN6-204ENST00000564752 SLC23A3Q6PIS1 610 aa19.39■□□□□ 0.69
CLN6-204ENST00000564752 PIGZQ86VD9 579 aa19.39■□□□□ 0.69
CLN6-204ENST00000564752 ANKRD52Q8NB46 1076 aa19.39■□□□□ 0.69
CLN6-204ENST00000564752 BHMTQ93088 406 aa19.39■□□□□ 0.69
CLN6-204ENST00000564752 KIAA1468Q9P260 1216 aa19.39■□□□□ 0.69
CLN6-204ENST00000564752 CFAP47Q6ZTR5 3102 aa19.38■□□□□ 0.69
CLN6-204ENST00000564752 IGHV1OR15-9A0A0B4J2B8 117 aa19.38■□□□□ 0.69
CLN6-204ENST00000564752 ZNF217O75362 1048 aa19.38■□□□□ 0.69
CLN6-204ENST00000564752 GNA14O95837 355 aa19.38■□□□□ 0.69
CLN6-204ENST00000564752 CEACAM1P13688 526 aa19.38■□□□□ 0.69
CLN6-204ENST00000564752 NDUFV2P19404 249 aa19.38■□□□□ 0.69
CLN6-204ENST00000564752 TBXAS1P24557 533 aaPredicted RBP19.38■□□□□ 0.69
CLN6-204ENST00000564752 HOXD12P35452 270 aa19.38■□□□□ 0.69
CLN6-204ENST00000564752 CHKAP35790 457 aa19.38■□□□□ 0.69
CLN6-204ENST00000564752 RPL6Q02878 288 aaKnown RBP19.38■□□□□ 0.69
CLN6-204ENST00000564752 CETN1Q12798 172 aa19.38■□□□□ 0.69
CLN6-204ENST00000564752 ARHGAP18Q8N392 663 aa19.38■□□□□ 0.69
CLN6-204ENST00000564752 DCLK3Q9C098 648 aa19.38■□□□□ 0.69
CLN6-204ENST00000564752 RASAL2Q9UJF2 1139 aa19.38■□□□□ 0.69
CLN6-204ENST00000564752 SLC27A6Q9Y2P4 619 aa19.38■□□□□ 0.69
CLN6-204ENST00000564752 WASH3PC4AMC7 463 aa19.37■□□□□ 0.69
CLN6-204ENST00000564752 HMBSP08397 361 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms