RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 C16orf71Q8IYS4 520 aaPredicted RBP5.65□□□□□ -1.5
UBR1-205ENST00000564540 PARD3BQ8TEW8 1205 aa5.65□□□□□ -1.5
UBR1-205ENST00000564540 ADGRE3Q9BY15 652 aa5.65□□□□□ -1.5
UBR1-205ENST00000564540 STARD7Q9NQZ5 370 aa5.65□□□□□ -1.5
UBR1-205ENST00000564540 TMOD4Q9NZQ9 345 aa5.65□□□□□ -1.5
UBR1-205ENST00000564540 C16orf96A6NNT2 1141 aa5.64□□□□□ -1.51
UBR1-205ENST00000564540 PECAM1P16284 738 aaPredicted RBP5.64□□□□□ -1.51
UBR1-205ENST00000564540 ITGB6P18564 788 aa5.64□□□□□ -1.51
UBR1-205ENST00000564540 PTGER1P34995 402 aa5.64□□□□□ -1.51
UBR1-205ENST00000564540 JAK3P52333 1124 aa5.64□□□□□ -1.51
UBR1-205ENST00000564540 WDR5P61964 334 aaKnown RBP5.64□□□□□ -1.51
UBR1-205ENST00000564540 ZNF91Q05481 1191 aa5.64□□□□□ -1.51
UBR1-205ENST00000564540 KCNJ12Q14500 433 aa5.64□□□□□ -1.51
UBR1-205ENST00000564540 LONRF1Q17RB8 773 aa5.64□□□□□ -1.51
UBR1-205ENST00000564540 ARHGAP15Q53QZ3 475 aa5.64□□□□□ -1.51
UBR1-205ENST00000564540 TMEM196Q5HYL7 178 aa5.64□□□□□ -1.51
UBR1-205ENST00000564540 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.64□□□□□ -1.51
UBR1-205ENST00000564540 FAM209BQ5JX69 171 aa5.64□□□□□ -1.51
UBR1-205ENST00000564540 MRNIPQ6NTE8 343 aa5.64□□□□□ -1.51
UBR1-205ENST00000564540 TXLNBQ8N3L3 684 aa5.64□□□□□ -1.51
UBR1-205ENST00000564540 NANOGP1Q8N7R0 232 aa5.64□□□□□ -1.51
UBR1-205ENST00000564540 GLIS1Q8NBF1 620 aa5.64□□□□□ -1.51
UBR1-205ENST00000564540 FCRL4Q96PJ5 515 aa5.64□□□□□ -1.51
UBR1-205ENST00000564540 GDF15Q99988 308 aa5.64□□□□□ -1.51
UBR1-205ENST00000564540 TMEM184CQ9NVA4 438 aa5.64□□□□□ -1.51
UBR1-205ENST00000564540 SEMA5BQ9P283 1151 aa5.64□□□□□ -1.51
UBR1-205ENST00000564540 RRHO14718 337 aa5.63□□□□□ -1.51
UBR1-205ENST00000564540 ZSCAN9O15535 394 aaPredicted RBP5.63□□□□□ -1.51
UBR1-205ENST00000564540 CYP19A1P11511 503 aaPredicted RBP5.63□□□□□ -1.51
UBR1-205ENST00000564540 DGKQP52824 942 aa5.63□□□□□ -1.51
UBR1-205ENST00000564540 CFHR1Q03591 330 aa5.63□□□□□ -1.51
UBR1-205ENST00000564540 BFSP2Q13515 415 aa5.63□□□□□ -1.51
UBR1-205ENST00000564540 PFKFB3Q16875 520 aaPredicted RBP5.63□□□□□ -1.51
UBR1-205ENST00000564540 SLC35G1Q2M3R5 365 aa5.63□□□□□ -1.51
UBR1-205ENST00000564540 FAM90A2PQ658T7 463 aa5.63□□□□□ -1.51
UBR1-205ENST00000564540 USP17L6PQ6QN14 398 aa5.63□□□□□ -1.51
UBR1-205ENST00000564540 SHC4Q6S5L8 630 aa5.63□□□□□ -1.51
UBR1-205ENST00000564540 BHLHA9Q7RTU4 235 aa5.63□□□□□ -1.51
UBR1-205ENST00000564540 IGFBPL1Q8WX77 278 aa5.63□□□□□ -1.51
UBR1-205ENST00000564540 CUL5Q93034 780 aa5.63□□□□□ -1.51
UBR1-205ENST00000564540 COQ8BQ96D53 544 aa5.63□□□□□ -1.51
UBR1-205ENST00000564540 SNX27Q96L92 541 aa5.63□□□□□ -1.51
UBR1-205ENST00000564540 RIPOR3Q96MK2 946 aa5.63□□□□□ -1.51
UBR1-205ENST00000564540 SIGLEC11Q96RL6 698 aa5.63□□□□□ -1.51
UBR1-205ENST00000564540 TM2D2Q9BX73 214 aa5.63□□□□□ -1.51
UBR1-205ENST00000564540 NUAK2Q9H093 628 aa5.63□□□□□ -1.51
UBR1-205ENST00000564540 TMEM8AQ9HCN3 771 aa5.63□□□□□ -1.51
UBR1-205ENST00000564540 MTMR4Q9NYA4 1195 aa5.63□□□□□ -1.51
UBR1-205ENST00000564540 AFG3L2Q9Y4W6 797 aa5.63□□□□□ -1.51
UBR1-205ENST00000564540 FAM234BA2RU67 622 aa5.62□□□□□ -1.51
UBR1-205ENST00000564540 EGR1P18146 543 aa5.62□□□□□ -1.51
UBR1-205ENST00000564540 SLC5A2P31639 672 aa5.62□□□□□ -1.51
UBR1-205ENST00000564540 SLC5A9Q2M3M2 681 aa5.62□□□□□ -1.51
UBR1-205ENST00000564540 PXDC1Q5TGL8 231 aa5.62□□□□□ -1.51
UBR1-205ENST00000564540 TFAP2DQ7Z6R9 452 aa5.62□□□□□ -1.51
UBR1-205ENST00000564540 Q8N9P0 234 aaPredicted RBP5.62□□□□□ -1.51
UBR1-205ENST00000564540 GRAMD1AQ96CP6 724 aa5.62□□□□□ -1.51
UBR1-205ENST00000564540 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.62□□□□□ -1.511e-6■■■■■ 32.1
UBR1-205ENST00000564540 MLXIPLQ9NP71 852 aa5.62□□□□□ -1.51
UBR1-205ENST00000564540 ABHD10Q9NUJ1 306 aa5.62□□□□□ -1.51
UBR1-205ENST00000564540 RGL1Q9NZL6 768 aa5.62□□□□□ -1.51
UBR1-205ENST00000564540 MAFFQ9ULX9 164 aa5.62□□□□□ -1.51
UBR1-205ENST00000564540 ANO9A1A5B4 782 aa5.61□□□□□ -1.51
UBR1-205ENST00000564540 FGF18O76093 207 aa5.61□□□□□ -1.51
UBR1-205ENST00000564540 FGBP02675 491 aa5.61□□□□□ -1.51
UBR1-205ENST00000564540 TACR3P29371 465 aa5.61□□□□□ -1.51
UBR1-205ENST00000564540 THBS4P35443 961 aa5.61□□□□□ -1.51
UBR1-205ENST00000564540 TM4SF4P48230 202 aa5.61□□□□□ -1.51
UBR1-205ENST00000564540 GAB1Q13480 694 aa5.61□□□□□ -1.51
UBR1-205ENST00000564540 ATP1A4Q13733 1029 aa5.61□□□□□ -1.51
UBR1-205ENST00000564540 HLTFQ14527 1009 aaKnown RBP eCLIP5.61□□□□□ -1.51
UBR1-205ENST00000564540 C10orf25Q5T742 122 aa5.61□□□□□ -1.51
UBR1-205ENST00000564540 SPATA31A1Q5TZJ5 1347 aa5.61□□□□□ -1.51
UBR1-205ENST00000564540 IL31Q6EBC2 164 aa5.61□□□□□ -1.51
UBR1-205ENST00000564540 DPP9Q86TI2 863 aa5.61□□□□□ -1.51
UBR1-205ENST00000564540 NRACQ8N912 160 aa5.61□□□□□ -1.51
UBR1-205ENST00000564540 C16orf52Q8NHV5 167 aa5.61□□□□□ -1.51
UBR1-205ENST00000564540 ZBTB9Q96C00 473 aa5.61□□□□□ -1.51
UBR1-205ENST00000564540 AGO4Q9HCK5 861 aaKnown RBP5.61□□□□□ -1.51
UBR1-205ENST00000564540 ARL8BQ9NVJ2 186 aa5.61□□□□□ -1.51
UBR1-205ENST00000564540 PI4KBQ9UBF8 816 aa5.61□□□□□ -1.51
UBR1-205ENST00000564540 HEMK1Q9Y5R4 338 aaPredicted RBP5.61□□□□□ -1.51
UBR1-205ENST00000564540 RASA4BC9J798 803 aa5.6□□□□□ -1.51
UBR1-205ENST00000564540 RASA4O43374 803 aa5.6□□□□□ -1.51
UBR1-205ENST00000564540 IGKV2-30P06310 120 aa5.6□□□□□ -1.51
UBR1-205ENST00000564540 NBPF7P0C2Y1 421 aaPredicted RBP5.6□□□□□ -1.51
UBR1-205ENST00000564540 ALADP13716 330 aa5.6□□□□□ -1.51
UBR1-205ENST00000564540 PRF1P14222 555 aa5.6□□□□□ -1.51
UBR1-205ENST00000564540 IDEP14735 1019 aa5.6□□□□□ -1.51
UBR1-205ENST00000564540 IGHMBP2P38935 993 aaKnown RBP5.6□□□□□ -1.51
UBR1-205ENST00000564540 NR4A2P43354 598 aa5.6□□□□□ -1.51
UBR1-205ENST00000564540 SEMA3BQ13214 749 aa5.6□□□□□ -1.51
UBR1-205ENST00000564540 RBMS2Q15434 407 aaKnown RBP5.6□□□□□ -1.51
UBR1-205ENST00000564540 CNGA3Q16281 694 aa5.6□□□□□ -1.51
UBR1-205ENST00000564540 ANO7Q6IWH7 933 aa5.6□□□□□ -1.51
UBR1-205ENST00000564540 PIK3AP1Q6ZUJ8 805 aa5.6□□□□□ -1.51
UBR1-205ENST00000564540 CLASRPQ8N2M8 674 aaKnown RBP5.6□□□□□ -1.51
UBR1-205ENST00000564540 OR2C3Q8N628 320 aa5.6□□□□□ -1.51
UBR1-205ENST00000564540 ZNF366Q8N895 744 aa5.6□□□□□ -1.51
UBR1-205ENST00000564540 PIGOQ8TEQ8 1089 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms