RNA–Protein interactions for RNA: ENST00000563553.1

LINC01416-201, Transcript of long intergenic non-protein coding RNA 1416, humanhuman

TSL 1 (best) BASIC

Gene LINC01416, Length 2,310 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01416-201ENST00000563553 SEC24CP53992 1094 aa3.78□□□□□ -1.8
LINC01416-201ENST00000563553 EIF3BP55884 814 aaKnown RBP3.78□□□□□ -1.8
LINC01416-201ENST00000563553 GOLGA8FQ08AF8 430 aa3.78□□□□□ -1.8
LINC01416-201ENST00000563553 GOLGA8DPQ0D2H9 430 aa3.78□□□□□ -1.8
LINC01416-201ENST00000563553 TRIM29Q14134 588 aa3.78□□□□□ -1.8
LINC01416-201ENST00000563553 CDC37Q16543 378 aaPredicted RBP3.78□□□□□ -1.8
LINC01416-201ENST00000563553 MTHFSDQ2M296 383 aaKnown RBP3.78□□□□□ -1.8
LINC01416-201ENST00000563553 ATP13A4Q4VNC1 1196 aa3.78□□□□□ -1.8
LINC01416-201ENST00000563553 CCDC122Q5T0U0 273 aa3.78□□□□□ -1.8
LINC01416-201ENST00000563553 AGAP9Q5VTM2 703 aa3.78□□□□□ -1.8
LINC01416-201ENST00000563553 TMED8Q6PL24 325 aaPredicted RBP3.78□□□□□ -1.8
LINC01416-201ENST00000563553 SPATA21Q7Z572 469 aa3.78□□□□□ -1.8
LINC01416-201ENST00000563553 ARHGAP22Q7Z5H3 698 aa3.78□□□□□ -1.8
LINC01416-201ENST00000563553 ZNF589Q86UQ0 364 aaPredicted RBP3.78□□□□□ -1.8
LINC01416-201ENST00000563553 ARHGAP18Q8N392 663 aa3.78□□□□□ -1.8
LINC01416-201ENST00000563553 RNF10Q8N5U6 811 aaKnown RBP3.78□□□□□ -1.8
LINC01416-201ENST00000563553 KBTBD3Q8NAB2 608 aa3.78□□□□□ -1.8
LINC01416-201ENST00000563553 CCDC197Q8NCU1 140 aa3.78□□□□□ -1.8
LINC01416-201ENST00000563553 ACRBPQ8NEB7 543 aa3.78□□□□□ -1.8
LINC01416-201ENST00000563553 NSMCE1Q8WV22 266 aa3.78□□□□□ -1.8
LINC01416-201ENST00000563553 HVCN1Q96D96 273 aa3.78□□□□□ -1.8
LINC01416-201ENST00000563553 TSC22D3Q99576 134 aa3.78□□□□□ -1.8
LINC01416-201ENST00000563553 FAM192AQ9GZU8 254 aa3.78□□□□□ -1.8
LINC01416-201ENST00000563553 NDST4Q9H3R1 872 aa3.78□□□□□ -1.8
LINC01416-201ENST00000563553 CENPHQ9H3R5 247 aa3.78□□□□□ -1.8
LINC01416-201ENST00000563553 VTA1Q9NP79 307 aa3.78□□□□□ -1.8
LINC01416-201ENST00000563553 HAUS2Q9NVX0 235 aa3.78□□□□□ -1.8
LINC01416-201ENST00000563553 SLC5A4Q9NY91 659 aa3.78□□□□□ -1.8
LINC01416-201ENST00000563553 SLC12A6Q9UHW9 1150 aa3.78□□□□□ -1.8
LINC01416-201ENST00000563553 GMEB1Q9Y692 573 aa3.78□□□□□ -1.8
LINC01416-201ENST00000563553 BCL9O00512 1426 aa3.78□□□□□ -1.8
LINC01416-201ENST00000563553 NWD1Q149M9 1564 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 USP6P35125 1406 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 MAP3K19Q56UN5 1328 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 A0A087WWV3 80 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 GPR75-ASB3A0A0A6YYF3 556 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 LRRD1A4D1F6 860 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 ZAR1LA6NP61 321 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 GCOM1H8Y6P7 765 aaPredicted RBP3.77□□□□□ -1.81
LINC01416-201ENST00000563553 O00370 1275 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 ENPP3O14638 875 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 CPLX1O14810 134 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 PJA2O43164 708 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 DDX58O95786 925 aaKnown RBP3.77□□□□□ -1.81
LINC01416-201ENST00000563553 ZFYP08048 801 aaPredicted RBP3.77□□□□□ -1.81
LINC01416-201ENST00000563553 MYZAPP0CAP1 466 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 EGR2P11161 476 aaPredicted RBP3.77□□□□□ -1.81
LINC01416-201ENST00000563553 PDHBP11177 359 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 ALDH3A1P30838 453 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 HNRNPH3P31942 346 aaKnown RBP3.77□□□□□ -1.81
LINC01416-201ENST00000563553 PSMC4P43686 418 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 CD151P48509 253 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 FXR1P51114 621 aaKnown RBP eCLIP3.77□□□□□ -1.81
LINC01416-201ENST00000563553 COPB1P53618 953 aaKnown RBP3.77□□□□□ -1.81
LINC01416-201ENST00000563553 KIF5AQ12840 1032 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 CUL3Q13618 768 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 IDI1Q13907 227 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 KCNB1Q14721 858 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 CCDC142Q17RM4 750 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 LONRF3Q496Y0 759 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 CCDC152Q4G0S7 254 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 HAUS3Q68CZ6 603 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 C8orf74Q6P047 294 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 STOX1Q6ZVD7 989 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 MAATS1Q7Z4T9 603 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 SPATA4Q8NEY3 305 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 LINS1Q8NG48 757 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 FAM81AQ8TBF8 368 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 ATRIPQ8WXE1 791 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 RIN2Q8WYP3 895 aaPredicted RBP3.77□□□□□ -1.81
LINC01416-201ENST00000563553 ORAI2Q96SN7 254 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 NUP88Q99567 741 aaPredicted RBP3.77□□□□□ -1.81
LINC01416-201ENST00000563553 EDEM3Q9BZQ6 932 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 FOXP1Q9H334 677 aaPredicted RBP3.77□□□□□ -1.81
LINC01416-201ENST00000563553 PAPOLBQ9NRJ5 636 aaKnown RBP3.77□□□□□ -1.81
LINC01416-201ENST00000563553 AATFQ9NY61 560 aaKnown RBP eCLIP3.77□□□□□ -1.81
LINC01416-201ENST00000563553 CIDEBQ9UHD4 219 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 LUC7L2Q9Y383 392 aaKnown RBP3.77□□□□□ -1.81
LINC01416-201ENST00000563553 ASB3Q9Y575 518 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 SRPRBQ9Y5M8 271 aaKnown RBP3.77□□□□□ -1.81
LINC01416-201ENST00000563553 ECM29Q5VYK3 1845 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 COL11A2P13942 1736 aaPredicted RBP3.77□□□□□ -1.81
LINC01416-201ENST00000563553 NRXN3Q9Y4C0 1643 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 ABCB11O95342 1321 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 AFF2P51816 1311 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 PDS5AQ29RF7 1337 aaKnown RBP3.77□□□□□ -1.81
LINC01416-201ENST00000563553 PIPSLA2A3N6 862 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 ZNF233A6NK53 670 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 DRGXA6NNA5 263 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 LGALS16A8MUM7 142 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 CXorf49A8MYA2 514 aaPredicted RBP3.77□□□□□ -1.81
LINC01416-201ENST00000563553 B4DLN1 442 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 DIRC3C9JPN6 131 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 ATP5HO75947 161 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 ANP32DO95626 131 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 MYBP10242 640 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 IDEP14735 1019 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 ALOX15P16050 662 aaPredicted RBP3.77□□□□□ -1.81
LINC01416-201ENST00000563553 ENPP1P22413 925 aa3.77□□□□□ -1.81
LINC01416-201ENST00000563553 CRHR1P34998 444 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms