RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 PBX1P40424 430 aa3.93□□□□□ -1.78
HMGB1P33-201ENST00000563485 CPA2P48052 419 aa3.93□□□□□ -1.78
HMGB1P33-201ENST00000563485 JAK3P52333 1124 aa3.93□□□□□ -1.78
HMGB1P33-201ENST00000563485 MTX1Q13505 466 aa3.93□□□□□ -1.78
HMGB1P33-201ENST00000563485 STIM1Q13586 685 aa3.93□□□□□ -1.78
HMGB1P33-201ENST00000563485 RAPGEF1Q13905 1077 aa3.93□□□□□ -1.78
HMGB1P33-201ENST00000563485 DAG1Q14118 895 aa3.93□□□□□ -1.78
HMGB1P33-201ENST00000563485 AASDHQ4L235 1098 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P33-201ENST00000563485 TFAP2DQ7Z6R9 452 aa3.93□□□□□ -1.78
HMGB1P33-201ENST00000563485 ARFGAP1Q8N6T3 406 aa3.93□□□□□ -1.78
HMGB1P33-201ENST00000563485 SUN3Q8TAQ9 357 aa3.93□□□□□ -1.78
HMGB1P33-201ENST00000563485 NSMCE1Q8WV22 266 aa3.93□□□□□ -1.78
HMGB1P33-201ENST00000563485 TIFAQ96CG3 184 aa3.93□□□□□ -1.78
HMGB1P33-201ENST00000563485 ZFYVE19Q96K21 471 aa3.93□□□□□ -1.78
HMGB1P33-201ENST00000563485 UNKQ9C0B0 810 aaKnown RBP3.93□□□□□ -1.78
HMGB1P33-201ENST00000563485 NUP62CLQ9H1M0 184 aa3.93□□□□□ -1.78
HMGB1P33-201ENST00000563485 AGO4Q9HCK5 861 aaKnown RBP3.93□□□□□ -1.78
HMGB1P33-201ENST00000563485 PRDM11Q9NQV5 511 aa3.93□□□□□ -1.78
HMGB1P33-201ENST00000563485 ARL8BQ9NVJ2 186 aa3.93□□□□□ -1.78
HMGB1P33-201ENST00000563485 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P33-201ENST00000563485 PCDHB2Q9Y5E7 798 aa3.93□□□□□ -1.78
HMGB1P33-201ENST00000563485 SPATA31A1Q5TZJ5 1347 aa3.93□□□□□ -1.78
HMGB1P33-201ENST00000563485 FAM90A10PA6NDY2 464 aa3.92□□□□□ -1.78
HMGB1P33-201ENST00000563485 IL18RAPO95256 599 aa3.92□□□□□ -1.78
HMGB1P33-201ENST00000563485 PLAUP00749 431 aa3.92□□□□□ -1.78
HMGB1P33-201ENST00000563485 ARP10275 920 aa3.92□□□□□ -1.78
HMGB1P33-201ENST00000563485 ATF3P18847 181 aa3.92□□□□□ -1.78
HMGB1P33-201ENST00000563485 ME1P48163 572 aa3.92□□□□□ -1.78
HMGB1P33-201ENST00000563485 ACOX1Q15067 660 aa3.92□□□□□ -1.78
HMGB1P33-201ENST00000563485 FAM110CQ1W6H9 321 aa3.92□□□□□ -1.78
HMGB1P33-201ENST00000563485 CRTC1Q6UUV9 634 aa3.92□□□□□ -1.78
HMGB1P33-201ENST00000563485 ZNF793Q6ZN11 406 aa3.92□□□□□ -1.78
HMGB1P33-201ENST00000563485 UBE2Q1Q7Z7E8 422 aa3.92□□□□□ -1.78
HMGB1P33-201ENST00000563485 ZDHHC17Q8IUH5 632 aa3.92□□□□□ -1.78
HMGB1P33-201ENST00000563485 WDR75Q8IWA0 830 aaKnown RBP3.92□□□□□ -1.78
HMGB1P33-201ENST00000563485 KRT78Q8N1N4 520 aa3.92□□□□□ -1.78
HMGB1P33-201ENST00000563485 PHKBQ93100 1093 aa3.92□□□□□ -1.78
HMGB1P33-201ENST00000563485 IQCDQ96DY2 449 aa3.92□□□□□ -1.78
HMGB1P33-201ENST00000563485 TRMT61AQ96FX7 289 aaKnown RBP3.92□□□□□ -1.78
HMGB1P33-201ENST00000563485 FCRL5Q96RD9 977 aa3.92□□□□□ -1.78
HMGB1P33-201ENST00000563485 TRMOQ9BU70 441 aa3.92□□□□□ -1.78
HMGB1P33-201ENST00000563485 PNPLA8Q9NP80 782 aa3.92□□□□□ -1.78
HMGB1P33-201ENST00000563485 ABHD10Q9NUJ1 306 aa3.92□□□□□ -1.78
HMGB1P33-201ENST00000563485 POT1Q9NUX5 634 aa3.92□□□□□ -1.78
HMGB1P33-201ENST00000563485 VPS4AQ9UN37 437 aa3.92□□□□□ -1.78
HMGB1P33-201ENST00000563485 HEMK1Q9Y5R4 338 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P33-201ENST00000563485 HS3ST3B1Q9Y662 390 aa3.92□□□□□ -1.78
HMGB1P33-201ENST00000563485 SIRT4Q9Y6E7 314 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P33-201ENST00000563485 CD8B2A6NJW9 211 aa3.91□□□□□ -1.78
HMGB1P33-201ENST00000563485 RHPN2P1A8MT19 583 aa3.91□□□□□ -1.78
HMGB1P33-201ENST00000563485 H3BNX3 289 aa3.91□□□□□ -1.78
HMGB1P33-201ENST00000563485 THAP12O43422 761 aa3.91□□□□□ -1.78
HMGB1P33-201ENST00000563485 CBFA2T3O75081 653 aa3.91□□□□□ -1.78
HMGB1P33-201ENST00000563485 TOMM40O96008 361 aa3.91□□□□□ -1.78
HMGB1P33-201ENST00000563485 TKTP29401 623 aaKnown RBP3.91□□□□□ -1.78
HMGB1P33-201ENST00000563485 HOXA7P31268 230 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P33-201ENST00000563485 IDUAP35475 653 aa3.91□□□□□ -1.78
HMGB1P33-201ENST00000563485 PIK3CBP42338 1070 aa3.91□□□□□ -1.78
HMGB1P33-201ENST00000563485 DGKQP52824 942 aa3.91□□□□□ -1.78
HMGB1P33-201ENST00000563485 GPS1Q13098 491 aa3.91□□□□□ -1.78
HMGB1P33-201ENST00000563485 EARS2Q5JPH6 523 aaKnown RBP3.91□□□□□ -1.78
HMGB1P33-201ENST00000563485 KLHDC7AQ5VTJ3 777 aa3.91□□□□□ -1.78
HMGB1P33-201ENST00000563485 ABLIM2Q6H8Q1 611 aa3.91□□□□□ -1.78
HMGB1P33-201ENST00000563485 COLCA1Q6ZS62 124 aa3.91□□□□□ -1.78
HMGB1P33-201ENST00000563485 KRT28Q7Z3Y7 464 aa3.91□□□□□ -1.78
HMGB1P33-201ENST00000563485 LRRC46Q96FV0 321 aa3.91□□□□□ -1.78
HMGB1P33-201ENST00000563485 WDR24Q96S15 920 aa3.91□□□□□ -1.78
HMGB1P33-201ENST00000563485 ZBTB40Q9NUA8 1239 aa3.91□□□□□ -1.78
HMGB1P33-201ENST00000563485 SQORQ9Y6N5 450 aa3.91□□□□□ -1.78
HMGB1P33-201ENST00000563485 SLC22A23A1A5C7 686 aa3.9□□□□□ -1.79
HMGB1P33-201ENST00000563485 PQBP1O60828 265 aaKnown RBP3.9□□□□□ -1.79
HMGB1P33-201ENST00000563485 OAZ2O95190 189 aa3.9□□□□□ -1.79
HMGB1P33-201ENST00000563485 DRD1P21728 446 aa3.9□□□□□ -1.79
HMGB1P33-201ENST00000563485 CCKBRP32239 447 aa3.9□□□□□ -1.79
HMGB1P33-201ENST00000563485 VPS41P49754 854 aa3.9□□□□□ -1.79
HMGB1P33-201ENST00000563485 ZNF543Q08ER8 600 aa3.9□□□□□ -1.79
HMGB1P33-201ENST00000563485 MTA1Q13330 715 aa3.9□□□□□ -1.79
HMGB1P33-201ENST00000563485 GAB1Q13480 694 aa3.9□□□□□ -1.79
HMGB1P33-201ENST00000563485 KCNJ12Q14500 433 aa3.9□□□□□ -1.79
HMGB1P33-201ENST00000563485 CNGA3Q16281 694 aa3.9□□□□□ -1.79
HMGB1P33-201ENST00000563485 RUSC1-AS1Q66K80 236 aa3.9□□□□□ -1.79
HMGB1P33-201ENST00000563485 CRELD2Q6UXH1 353 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P33-201ENST00000563485 PIM3Q86V86 326 aa3.9□□□□□ -1.79
HMGB1P33-201ENST00000563485 ATP11CQ8NB49 1132 aa3.9□□□□□ -1.79
HMGB1P33-201ENST00000563485 PIGKQ92643 395 aa3.9□□□□□ -1.79
HMGB1P33-201ENST00000563485 TMEM45AQ9NWC5 275 aa3.9□□□□□ -1.79
HMGB1P33-201ENST00000563485 ZNF580Q9UK33 172 aa3.9□□□□□ -1.79
HMGB1P33-201ENST00000563485 TTBK1Q5TCY1 1321 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P33-201ENST00000563485 POM121BA6NF01 834 aa3.89□□□□□ -1.79
HMGB1P33-201ENST00000563485 B4DGG1 531 aa3.89□□□□□ -1.79
HMGB1P33-201ENST00000563485 FOXN3O00409 490 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P33-201ENST00000563485 PRYO14603 147 aa3.89□□□□□ -1.79
HMGB1P33-201ENST00000563485 KPNA5O15131 536 aa3.89□□□□□ -1.79
HMGB1P33-201ENST00000563485 TULP3O75386 442 aa3.89□□□□□ -1.79
HMGB1P33-201ENST00000563485 CRYABP02511 175 aaKnown RBP3.89□□□□□ -1.79
HMGB1P33-201ENST00000563485 ALPLP05186 524 aa3.89□□□□□ -1.79
HMGB1P33-201ENST00000563485 CD63P08962 238 aa3.89□□□□□ -1.79
HMGB1P33-201ENST00000563485 ST6GAL1P15907 406 aa3.89□□□□□ -1.79
HMGB1P33-201ENST00000563485 TNFRSF1BP20333 461 aa3.89□□□□□ -1.79
HMGB1P33-201ENST00000563485 RPS6KB1P23443 525 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms