RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 FARP1Q9Y4F1 1045 aaPredicted RBP9.77□□□□□ -0.84
LINC00838-201ENST00000562956 USP3Q9Y6I4 520 aa9.77□□□□□ -0.84
LINC00838-201ENST00000562956 TSC2P49815 1807 aa9.77□□□□□ -0.85
LINC00838-201ENST00000562956 TLDC2A0PJX2 215 aa9.77□□□□□ -0.85
LINC00838-201ENST00000562956 GOLGA8MH3BSY2 632 aa9.77□□□□□ -0.85
LINC00838-201ENST00000562956 LTFP02788 710 aa9.77□□□□□ -0.85
LINC00838-201ENST00000562956 HPDP32754 393 aaPredicted RBP9.77□□□□□ -0.85
LINC00838-201ENST00000562956 ATN1P54259 1190 aaPredicted RBP9.77□□□□□ -0.85
LINC00838-201ENST00000562956 TSPY1Q01534 308 aa9.77□□□□□ -0.85
LINC00838-201ENST00000562956 GBE1Q04446 702 aa9.77□□□□□ -0.85
LINC00838-201ENST00000562956 GAD2Q05329 585 aa9.77□□□□□ -0.85
LINC00838-201ENST00000562956 DEUP1Q05D60 604 aa9.77□□□□□ -0.85
LINC00838-201ENST00000562956 SLC10A2Q12908 348 aaPredicted RBP9.77□□□□□ -0.85
LINC00838-201ENST00000562956 ANKRD22Q5VYY1 191 aa9.77□□□□□ -0.85
LINC00838-201ENST00000562956 CCDC33Q8N5R6 958 aa9.77□□□□□ -0.85
LINC00838-201ENST00000562956 SCAMP5Q8TAC9 235 aa9.77□□□□□ -0.85
LINC00838-201ENST00000562956 CPT1BQ92523 772 aa9.77□□□□□ -0.85
LINC00838-201ENST00000562956 EDEM1Q92611 657 aa9.77□□□□□ -0.85
LINC00838-201ENST00000562956 PRCCQ92733 491 aaPredicted RBP9.77□□□□□ -0.85
LINC00838-201ENST00000562956 SCLYQ96I15 445 aa9.77□□□□□ -0.85
LINC00838-201ENST00000562956 C9orf72Q96LT7 481 aa9.77□□□□□ -0.85
LINC00838-201ENST00000562956 FAM193BQ96PV7 902 aaPredicted RBP9.77□□□□□ -0.85
LINC00838-201ENST00000562956 USP29Q9HBJ7 922 aa9.77□□□□□ -0.85
LINC00838-201ENST00000562956 ANLNQ9NQW6 1124 aa9.77□□□□□ -0.85
LINC00838-201ENST00000562956 ETNK2Q9NVF9 386 aa9.77□□□□□ -0.85
LINC00838-201ENST00000562956 HCSTQ9UBK5 93 aa9.77□□□□□ -0.85
LINC00838-201ENST00000562956 OGDHLQ9ULD0 1010 aa9.77□□□□□ -0.85
LINC00838-201ENST00000562956 NOVA2Q9UNW9 492 aaKnown RBP9.77□□□□□ -0.85
LINC00838-201ENST00000562956 PCDHB7Q9Y5E2 793 aa9.77□□□□□ -0.85
LINC00838-201ENST00000562956 TMEM189-UBE2V1I3L0A0 370 aa9.76□□□□□ -0.85
LINC00838-201ENST00000562956 PITPNM1O00562 1244 aa9.76□□□□□ -0.85
LINC00838-201ENST00000562956 AMHP03971 560 aa9.76□□□□□ -0.85
LINC00838-201ENST00000562956 CCL5P13501 91 aa9.76□□□□□ -0.85
LINC00838-201ENST00000562956 STIP1P31948 543 aaKnown RBP9.76□□□□□ -0.85
LINC00838-201ENST00000562956 SLCO1A2P46721 670 aa9.76□□□□□ -0.85
LINC00838-201ENST00000562956 FASTKD3Q14CZ7 662 aaKnown RBP9.76□□□□□ -0.85
LINC00838-201ENST00000562956 MAPRE1Q15691 268 aaKnown RBP9.76□□□□□ -0.85
LINC00838-201ENST00000562956 HP1BP3Q5SSJ5 553 aaPredicted RBP9.76□□□□□ -0.85
LINC00838-201ENST00000562956 AGBL2Q5U5Z8 902 aa9.76□□□□□ -0.85
LINC00838-201ENST00000562956 KDM7AQ6ZMT4 941 aa9.76□□□□□ -0.85
LINC00838-201ENST00000562956 HOOK3Q86VS8 718 aa9.76□□□□□ -0.85
LINC00838-201ENST00000562956 RELL1Q8IUW5 271 aa9.76□□□□□ -0.85
LINC00838-201ENST00000562956 CASD1Q96PB1 797 aa9.76□□□□□ -0.85
LINC00838-201ENST00000562956 SEZ6LQ9BYH1 1024 aa9.76□□□□□ -0.85
LINC00838-201ENST00000562956 SHOC2Q9UQ13 582 aa9.76□□□□□ -0.85
LINC00838-201ENST00000562956 TDRD15B5MCY1 1934 aaKnown RBP9.76□□□□□ -0.85
LINC00838-201ENST00000562956 TCRBV7S3A2A0A539 114 aa9.76□□□□□ -0.85
LINC00838-201ENST00000562956 ARHGEF37A1IGU5 675 aa9.76□□□□□ -0.85
LINC00838-201ENST00000562956 I6L893 689 aaPredicted RBP9.76□□□□□ -0.85
LINC00838-201ENST00000562956 KCNN4O15554 427 aa9.76□□□□□ -0.85
LINC00838-201ENST00000562956 COL6A1P12109 1028 aa9.76□□□□□ -0.85
LINC00838-201ENST00000562956 AMPD1P23109 780 aa9.76□□□□□ -0.85
LINC00838-201ENST00000562956 RBL1P28749 1068 aa9.76□□□□□ -0.85
LINC00838-201ENST00000562956 MAGEA4P43358 317 aa9.76□□□□□ -0.85
LINC00838-201ENST00000562956 CCT5P48643 541 aa9.76□□□□□ -0.85
LINC00838-201ENST00000562956 MAGOHP61326 146 aaKnown RBP9.76□□□□□ -0.85
LINC00838-201ENST00000562956 PPARDQ03181 441 aa9.76□□□□□ -0.85
LINC00838-201ENST00000562956 SLC39A12Q504Y0 691 aa9.76□□□□□ -0.85
LINC00838-201ENST00000562956 NCBP2-AS2Q69YL0 99 aa9.76□□□□□ -0.85
LINC00838-201ENST00000562956 PM20D1Q6GTS8 502 aa9.76□□□□□ -0.85
LINC00838-201ENST00000562956 SPATA2LQ8IUW3 424 aaPredicted RBP9.76□□□□□ -0.85
LINC00838-201ENST00000562956 ABI1Q8IZP0 508 aa9.76□□□□□ -0.85
LINC00838-201ENST00000562956 FOXP3Q9BZS1 431 aa9.76□□□□□ -0.85
LINC00838-201ENST00000562956 CXorf56Q9H5V9 222 aa9.76□□□□□ -0.85
LINC00838-201ENST00000562956 ELAC1Q9H777 363 aaKnown RBP9.76□□□□□ -0.85
LINC00838-201ENST00000562956 WDR6Q9NNW5 1121 aaKnown RBP9.76□□□□□ -0.85
LINC00838-201ENST00000562956 SAYSD1Q9NPB0 183 aa9.76□□□□□ -0.85
LINC00838-201ENST00000562956 SHOX2O60902 331 aaPredicted RBP9.76□□□□□ -0.85
LINC00838-201ENST00000562956 TADA2AO75478 443 aa9.76□□□□□ -0.85
LINC00838-201ENST00000562956 OAZ2O95190 189 aa9.76□□□□□ -0.85
LINC00838-201ENST00000562956 CCL23P55773 120 aa9.76□□□□□ -0.85
LINC00838-201ENST00000562956 SKOR1P84550 965 aa9.76□□□□□ -0.85
LINC00838-201ENST00000562956 LONRF1Q17RB8 773 aa9.76□□□□□ -0.85
LINC00838-201ENST00000562956 EMC10Q5UCC4 262 aa9.76□□□□□ -0.85
LINC00838-201ENST00000562956 TADA2BQ86TJ2 420 aa9.76□□□□□ -0.85
LINC00838-201ENST00000562956 PSTKQ8IV42 348 aaKnown RBP9.76□□□□□ -0.85
LINC00838-201ENST00000562956 PPIL6Q8IXY8 311 aa9.76□□□□□ -0.85
LINC00838-201ENST00000562956 NAT8LQ8N9F0 302 aa9.76□□□□□ -0.85
LINC00838-201ENST00000562956 SEPT8Q92599 483 aa9.76□□□□□ -0.85
LINC00838-201ENST00000562956 TLCD1Q96CP7 247 aa9.76□□□□□ -0.85
LINC00838-201ENST00000562956 TMEM109Q9BVC6 243 aa9.76□□□□□ -0.85
LINC00838-201ENST00000562956 FAM72CH0Y354 149 aa9.75□□□□□ -0.85
LINC00838-201ENST00000562956 RASGRF2O14827 1237 aa9.75□□□□□ -0.85
LINC00838-201ENST00000562956 BANF1O75531 89 aa9.75□□□□□ -0.85
LINC00838-201ENST00000562956 TMEM63AO94886 807 aa9.75□□□□□ -0.85
LINC00838-201ENST00000562956 ADRA1BP35368 520 aa9.75□□□□□ -0.85
LINC00838-201ENST00000562956 GRIK1P39086 918 aa9.75□□□□□ -0.85
LINC00838-201ENST00000562956 ARL4AP40617 200 aa9.75□□□□□ -0.85
LINC00838-201ENST00000562956 BASP1P80723 227 aaKnown RBP9.75□□□□□ -0.85
LINC00838-201ENST00000562956 FAM72AQ5TYM5 149 aa9.75□□□□□ -0.85
LINC00838-201ENST00000562956 BSPRYQ5W0U4 402 aa9.75□□□□□ -0.85
LINC00838-201ENST00000562956 FAM72DQ6L9T8 149 aa9.75□□□□□ -0.85
LINC00838-201ENST00000562956 PCGF5Q86SE9 256 aa9.75□□□□□ -0.85
LINC00838-201ENST00000562956 FAM72BQ86X60 149 aa9.75□□□□□ -0.85
LINC00838-201ENST00000562956 CRIPAKQ8N1N5 446 aa9.75□□□□□ -0.85
LINC00838-201ENST00000562956 RNF139Q8WU17 664 aa9.75□□□□□ -0.85
LINC00838-201ENST00000562956 PGM2Q96G03 612 aa9.75□□□□□ -0.85
LINC00838-201ENST00000562956 B3GALT6Q96L58 329 aa9.75□□□□□ -0.85
LINC00838-201ENST00000562956 CAPS2Q9BXY5 557 aa9.75□□□□□ -0.85
LINC00838-201ENST00000562956 ZCWPW1Q9H0M4 648 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms