RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 EMC2Q15006 297 aa13.77□□□□□ -0.21
CLK3-206ENST00000562078 ZNF423Q2M1K9 1284 aa13.77□□□□□ -0.21
CLK3-206ENST00000562078 XKR3Q5GH77 459 aa13.77□□□□□ -0.21
CLK3-206ENST00000562078 EFHC1Q5JVL4 640 aa13.77□□□□□ -0.21
CLK3-206ENST00000562078 NEPROQ6NW34 567 aa13.77□□□□□ -0.21
CLK3-206ENST00000562078 RNF169Q8NCN4 708 aa13.77□□□□□ -0.21
CLK3-206ENST00000562078 TMIGD2Q96BF3 282 aa13.77□□□□□ -0.21
CLK3-206ENST00000562078 NTPCRQ9BSD7 190 aaKnown RBP13.77□□□□□ -0.21
CLK3-206ENST00000562078 R3HDMLQ9H3Y0 253 aa13.77□□□□□ -0.21
CLK3-206ENST00000562078 TRNAU1APQ9NX07 287 aaKnown RBP13.77□□□□□ -0.21
CLK3-206ENST00000562078 UVRAGQ9P2Y5 699 aa13.77□□□□□ -0.21
CLK3-206ENST00000562078 PPARGC1AQ9UBK2 798 aaKnown RBP13.77□□□□□ -0.21
CLK3-206ENST00000562078 RSL24D1Q9UHA3 163 aaKnown RBP13.77□□□□□ -0.21
CLK3-206ENST00000562078 SLC45A1Q9Y2W3 748 aa13.77□□□□□ -0.21
CLK3-206ENST00000562078 PLXNB2O15031 1838 aa13.77□□□□□ -0.21
CLK3-206ENST00000562078 E5RJQ4 531 aa13.76□□□□□ -0.21
CLK3-206ENST00000562078 SERPINB6P35237 376 aa13.76□□□□□ -0.21
CLK3-206ENST00000562078 EIF2B2P49770 351 aaKnown RBP13.76□□□□□ -0.21
CLK3-206ENST00000562078 BCAP31P51572 246 aa13.76□□□□□ -0.21
CLK3-206ENST00000562078 CAV1Q03135 178 aa13.76□□□□□ -0.21
CLK3-206ENST00000562078 SYCP2LQ5T4T6 812 aa13.76□□□□□ -0.21
CLK3-206ENST00000562078 IZUMO3Q5VZ72 239 aa13.76□□□□□ -0.21
CLK3-206ENST00000562078 BTBD9Q96Q07 612 aa13.76□□□□□ -0.21
CLK3-206ENST00000562078 MMP19Q99542 508 aa13.76□□□□□ -0.21
CLK3-206ENST00000562078 HERPUD2Q9BSE4 406 aa13.76□□□□□ -0.21
CLK3-206ENST00000562078 DRC3Q9H069 523 aa13.76□□□□□ -0.21
CLK3-206ENST00000562078 WNT8AQ9H1J5 351 aa13.76□□□□□ -0.21
CLK3-206ENST00000562078 MROH8Q9H579 483 aa13.76□□□□□ -0.21
CLK3-206ENST00000562078 ZNF302Q9NR11 478 aa13.76□□□□□ -0.21
CLK3-206ENST00000562078 SENP1Q9P0U3 644 aa13.76□□□□□ -0.21
CLK3-206ENST00000562078 TIMM22Q9Y584 194 aa13.76□□□□□ -0.21
CLK3-206ENST00000562078 GPC6Q9Y625 555 aaPredicted RBP13.76□□□□□ -0.21
CLK3-206ENST00000562078 ITM2AO43736 263 aa13.76□□□□□ -0.21
CLK3-206ENST00000562078 ABHD2P08910 425 aa13.76□□□□□ -0.21
CLK3-206ENST00000562078 OCM2P0CE71 109 aa13.76□□□□□ -0.21
CLK3-206ENST00000562078 OCMP0CE72 109 aaPredicted RBP13.76□□□□□ -0.21
CLK3-206ENST00000562078 RAG1P15918 1043 aa13.76□□□□□ -0.21
CLK3-206ENST00000562078 UBA1P22314 1058 aaKnown RBP13.76□□□□□ -0.21
CLK3-206ENST00000562078 ICAM3P32942 547 aa13.76□□□□□ -0.21
CLK3-206ENST00000562078 CAMK2BQ13554 666 aa13.76□□□□□ -0.21
CLK3-206ENST00000562078 DNAL1Q4LDG9 190 aa13.76□□□□□ -0.21
CLK3-206ENST00000562078 BORAQ6PGQ7 559 aa13.76□□□□□ -0.21
CLK3-206ENST00000562078 TAS1R3Q7RTX0 852 aa13.76□□□□□ -0.21
CLK3-206ENST00000562078 AMIGO2Q86SJ2 522 aa13.76□□□□□ -0.21
CLK3-206ENST00000562078 GPRC5AQ8NFJ5 357 aa13.76□□□□□ -0.21
CLK3-206ENST00000562078 SEMA4DQ92854 862 aa13.76□□□□□ -0.21
CLK3-206ENST00000562078 TMEM143Q96AN5 459 aa13.76□□□□□ -0.21
CLK3-206ENST00000562078 CCDC124Q96CT7 223 aaKnown RBP13.76□□□□□ -0.21
CLK3-206ENST00000562078 CFAP57Q96MR6 1250 aa13.76□□□□□ -0.21
CLK3-206ENST00000562078 OSBPL6Q9BZF3 934 aa13.76□□□□□ -0.21
CLK3-206ENST00000562078 TAGLN3Q9UI15 199 aa13.76□□□□□ -0.21
CLK3-206ENST00000562078 RBMX2Q9Y388 322 aaKnown RBP13.76□□□□□ -0.21
CLK3-206ENST00000562078 DTNAQ9Y4J8 743 aa13.76□□□□□ -0.21
CLK3-206ENST00000562078 EVPLQ92817 2033 aa13.76□□□□□ -0.21
CLK3-206ENST00000562078 DENRO43583 198 aaKnown RBP13.75□□□□□ -0.21
CLK3-206ENST00000562078 PGK2P07205 417 aa13.75□□□□□ -0.21
CLK3-206ENST00000562078 PHKA2P46019 1235 aa13.75□□□□□ -0.21
CLK3-206ENST00000562078 EPHB1P54762 984 aa13.75□□□□□ -0.21
CLK3-206ENST00000562078 CCNA1P78396 465 aa13.75□□□□□ -0.21
CLK3-206ENST00000562078 SLC25A3Q00325 362 aa13.75□□□□□ -0.21
CLK3-206ENST00000562078 APOFQ13790 326 aa13.75□□□□□ -0.21
CLK3-206ENST00000562078 HSF5Q4G112 596 aaPredicted RBP13.75□□□□□ -0.21
CLK3-206ENST00000562078 METTL21CQ5VZV1 264 aa13.75□□□□□ -0.21
CLK3-206ENST00000562078 KYAT3Q6YP21 454 aaKnown RBP13.75□□□□□ -0.21
CLK3-206ENST00000562078 PRPF39Q86UA1 669 aaKnown RBP13.75□□□□□ -0.21
CLK3-206ENST00000562078 TDRPQ86YL5 185 aa13.75□□□□□ -0.21
CLK3-206ENST00000562078 RASAL3Q86YV0 1011 aa13.75□□□□□ -0.21
CLK3-206ENST00000562078 PYROXD1Q8WU10 500 aa13.75□□□□□ -0.21
CLK3-206ENST00000562078 ELMO3Q96BJ8 720 aa13.75□□□□□ -0.21
CLK3-206ENST00000562078 FAM84AQ96KN4 292 aa13.75□□□□□ -0.21
CLK3-206ENST00000562078 PARK7Q99497 189 aaKnown RBP13.75□□□□□ -0.21
CLK3-206ENST00000562078 VPS37BQ9H9H4 285 aa13.75□□□□□ -0.21
CLK3-206ENST00000562078 SLC38A7Q9NVC3 462 aa13.75□□□□□ -0.21
CLK3-206ENST00000562078 PLK2Q9NYY3 685 aa13.75□□□□□ -0.21
CLK3-206ENST00000562078 ARHGAP28Q9P2N2 729 aa13.75□□□□□ -0.21
CLK3-206ENST00000562078 MAD1L1Q9Y6D9 718 aa13.75□□□□□ -0.21
CLK3-206ENST00000562078 SOWAHBA6NEL2 793 aa13.75□□□□□ -0.21
CLK3-206ENST00000562078 TRPA1O75762 1119 aa13.75□□□□□ -0.21
CLK3-206ENST00000562078 TNFAIP8O95379 198 aa13.75□□□□□ -0.21
CLK3-206ENST00000562078 SRGAP2CP0DJJ0 459 aa13.75□□□□□ -0.21
CLK3-206ENST00000562078 SRGAP2BP0DMP2 458 aa13.75□□□□□ -0.21
CLK3-206ENST00000562078 THRAP10827 490 aa13.75□□□□□ -0.21
CLK3-206ENST00000562078 KPNA1P52294 538 aaPredicted RBP13.75□□□□□ -0.21
CLK3-206ENST00000562078 HADHBP55084 474 aaKnown RBP13.75□□□□□ -0.21
CLK3-206ENST00000562078 RPL26P61254 145 aaKnown RBP13.75□□□□□ -0.21
CLK3-206ENST00000562078 CYP24A1Q07973 514 aa13.75□□□□□ -0.21
CLK3-206ENST00000562078 PDE1CQ14123 709 aaPredicted RBP13.75□□□□□ -0.21
CLK3-206ENST00000562078 HIC1Q14526 733 aa13.75□□□□□ -0.21
CLK3-206ENST00000562078 DCAF6Q58WW2 860 aa13.75□□□□□ -0.21
CLK3-206ENST00000562078 RABGAP1LQ5R372 815 aa13.75□□□□□ -0.21
CLK3-206ENST00000562078 DCDC5Q6ZRR9 648 aa13.75□□□□□ -0.21
CLK3-206ENST00000562078 EEPD1Q7L9B9 569 aa13.75□□□□□ -0.21
CLK3-206ENST00000562078 DCUN1D1Q96GG9 259 aa13.75□□□□□ -0.21
CLK3-206ENST00000562078 AGPAT1Q99943 283 aa13.75□□□□□ -0.21
CLK3-206ENST00000562078 GBA3Q9H227 469 aa13.75□□□□□ -0.21
CLK3-206ENST00000562078 PORCNQ9H237 461 aa13.75□□□□□ -0.21
CLK3-206ENST00000562078 THEGQ9P2T0 379 aa13.75□□□□□ -0.21
CLK3-206ENST00000562078 PLXNA1Q9UIW2 1896 aa13.75□□□□□ -0.21
CLK3-206ENST00000562078 K7EPI3 171 aa13.74□□□□□ -0.21
CLK3-206ENST00000562078 FSCN2O14926 492 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms