RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 SV2CQ496J9 727 aa12.08□□□□□ -0.48
PCAT1-202ENST00000561978 UBAP2Q5T6F2 1119 aaKnown RBP12.08□□□□□ -0.48
PCAT1-202ENST00000561978 GKAP1Q5VSY0 366 aaPredicted RBP12.08□□□□□ -0.48
PCAT1-202ENST00000561978 PMF1Q6P1K2 205 aa12.08□□□□□ -0.48
PCAT1-202ENST00000561978 OLFML1Q6UWY5 402 aa12.08□□□□□ -0.48
PCAT1-202ENST00000561978 SPRED2Q7Z698 418 aa12.08□□□□□ -0.48
PCAT1-202ENST00000561978 ECHDC2Q86YB7 292 aa12.08□□□□□ -0.48
PCAT1-202ENST00000561978 ANKRD52Q8NB46 1076 aa12.08□□□□□ -0.48
PCAT1-202ENST00000561978 C18orf25Q96B23 403 aaPredicted RBP12.08□□□□□ -0.48
PCAT1-202ENST00000561978 NXF3Q9H4D5 531 aaKnown RBP12.08□□□□□ -0.48
PCAT1-202ENST00000561978 DNAJC17Q9NVM6 304 aaKnown RBP12.08□□□□□ -0.48
PCAT1-202ENST00000561978 TRIP11Q15643 1979 aa12.08□□□□□ -0.48
PCAT1-202ENST00000561978 FNDC1Q4ZHG4 1894 aaPredicted RBP12.08□□□□□ -0.48
PCAT1-202ENST00000561978 ZNF487B1APH4 448 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 DGKIO75912 1065 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 ETS1P14921 441 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 PECAM1P16284 738 aaPredicted RBP12.07□□□□□ -0.48
PCAT1-202ENST00000561978 TAF6P49848 677 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 BCAT1P54687 386 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 FAM189BP81408 668 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 BST2Q10589 180 aaKnown RBP12.07□□□□□ -0.48
PCAT1-202ENST00000561978 KRT81Q14533 505 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 CCDC14Q49A88 953 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 PAN2Q504Q3 1202 aaKnown RBP12.07□□□□□ -0.48
PCAT1-202ENST00000561978 TTC30AQ86WT1 665 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 TDRPQ86YL5 185 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 NPAS4Q8IUM7 802 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 GLIS1Q8NBF1 620 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 APPL2Q8NEU8 664 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.07□□□□□ -0.48
PCAT1-202ENST00000561978 P3H4Q92791 437 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 TNIP3Q96KP6 325 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 C9orf72Q96LT7 481 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 RAD9AQ99638 391 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 APOL6Q9BWW8 343 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 KRTAP3-3Q9BYR6 98 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 KRTAP3-2Q9BYR7 98 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.07□□□□□ -0.48
PCAT1-202ENST00000561978 TMEM161AQ9NX61 479 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 A0A0C4DFX4 3053 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 PPEF2O14830 753 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 HUS1O60921 280 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 CD48P09326 243 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 RBP3P10745 1247 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 AKAP5P24588 427 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 PHBP35232 272 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 RGS7P49802 495 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 ARL4CP56559 192 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 SMAD3P84022 425 aaKnown RBP12.07□□□□□ -0.48
PCAT1-202ENST00000561978 HIF1AQ16665 826 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 CCDC142Q17RM4 750 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 TADA2BQ86TJ2 420 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 PRUNE1Q86TP1 453 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 ZNF598Q86UK7 904 aaKnown RBP12.07□□□□□ -0.48
PCAT1-202ENST00000561978 SMG8Q8ND04 991 aaKnown RBP12.07□□□□□ -0.48
PCAT1-202ENST00000561978 SPATA18Q8TC71 538 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 ATXN2LQ8WWM7 1075 aaKnown RBP12.07□□□□□ -0.48
PCAT1-202ENST00000561978 PRCCQ92733 491 aaPredicted RBP12.07□□□□□ -0.48
PCAT1-202ENST00000561978 HSFY1Q96LI6 401 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 PWWP2AQ96N64 755 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 RNF157Q96PX1 679 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 NKX2-4Q9H2Z4 354 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 RNF19AQ9NV58 838 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 NAALADL1Q9UQQ1 740 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 IPPQ9Y573 584 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 INSL6Q9Y581 213 aa12.07□□□□□ -0.48
PCAT1-202ENST00000561978 SCN1AP35498 2009 aa12.06□□□□□ -0.48
PCAT1-202ENST00000561978 CFAP69A5D8W1 941 aa12.06□□□□□ -0.48
PCAT1-202ENST00000561978 MDM4O15151 490 aa12.06□□□□□ -0.48
PCAT1-202ENST00000561978 TSHRP16473 764 aa12.06□□□□□ -0.48
PCAT1-202ENST00000561978 TGM2P21980 687 aa12.06□□□□□ -0.48
PCAT1-202ENST00000561978 MAGEA9P43362 315 aa12.06□□□□□ -0.48
PCAT1-202ENST00000561978 PTPN9P43378 593 aa12.06□□□□□ -0.48
PCAT1-202ENST00000561978 RPL34P49207 117 aaKnown RBP12.06□□□□□ -0.48
PCAT1-202ENST00000561978 AFF1P51825 1210 aaKnown RBP12.06□□□□□ -0.48
PCAT1-202ENST00000561978 SLC8A3P57103 927 aa12.06□□□□□ -0.48
PCAT1-202ENST00000561978 HTRA4P83105 476 aaPredicted RBP12.06□□□□□ -0.48
PCAT1-202ENST00000561978 ROR1Q01973 937 aa12.06□□□□□ -0.48
PCAT1-202ENST00000561978 DPYSL3Q14195 570 aa12.06□□□□□ -0.48
PCAT1-202ENST00000561978 NOMO1Q15155 1222 aa12.06□□□□□ -0.48
PCAT1-202ENST00000561978 RASA2Q15283 850 aa12.06□□□□□ -0.48
PCAT1-202ENST00000561978 GLRA4Q5JXX5 417 aa12.06□□□□□ -0.48
PCAT1-202ENST00000561978 CLLU1OSQ5K130 101 aa12.06□□□□□ -0.48
PCAT1-202ENST00000561978 SCYL2Q6P3W7 929 aa12.06□□□□□ -0.48
PCAT1-202ENST00000561978 DARS2Q6PI48 645 aaKnown RBP12.06□□□□□ -0.48
PCAT1-202ENST00000561978 SCUBE3Q8IX30 993 aa12.06□□□□□ -0.48
PCAT1-202ENST00000561978 CACNA2D3Q8IZS8 1091 aa12.06□□□□□ -0.48
PCAT1-202ENST00000561978 FAM172AQ8WUF8 416 aa12.06□□□□□ -0.48
PCAT1-202ENST00000561978 DYDC1Q8WWB3 177 aa12.06□□□□□ -0.48
PCAT1-202ENST00000561978 KHSRPQ92945 711 aaKnown RBP eCLIP12.06□□□□□ -0.48
PCAT1-202ENST00000561978 FAM161BQ96MY7 647 aa12.06□□□□□ -0.48
PCAT1-202ENST00000561978 NSRP1Q9H0G5 558 aaKnown RBP12.06□□□□□ -0.48
PCAT1-202ENST00000561978 CERS4Q9HA82 394 aa12.06□□□□□ -0.48
PCAT1-202ENST00000561978 RC3H2Q9HBD1 1191 aaKnown RBP12.06□□□□□ -0.48
PCAT1-202ENST00000561978 UBN1Q9NPG3 1134 aa12.06□□□□□ -0.48
PCAT1-202ENST00000561978 FAM49BQ9NUQ9 324 aa12.06□□□□□ -0.48
PCAT1-202ENST00000561978 SAE1Q9UBE0 346 aaPredicted RBP12.06□□□□□ -0.48
PCAT1-202ENST00000561978 HCSTQ9UBK5 93 aa12.06□□□□□ -0.48
PCAT1-202ENST00000561978 FETUBQ9UGM5 382 aa12.06□□□□□ -0.48
PCAT1-202ENST00000561978 MSRAQ9UJ68 235 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms