RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 SORCS3Q9UPU3 1222 aa14.45□□□□□ -0.1
VPS9D1-202ENST00000561976 HMX2A2RU54 273 aa14.45□□□□□ -0.1
VPS9D1-202ENST00000561976 KLHL2O95198 593 aa14.45□□□□□ -0.1
VPS9D1-202ENST00000561976 SERPINB6P35237 376 aa14.45□□□□□ -0.1
VPS9D1-202ENST00000561976 LAMB3Q13751 1172 aa14.45□□□□□ -0.1
VPS9D1-202ENST00000561976 RSPH3Q86UC2 560 aa14.45□□□□□ -0.1
VPS9D1-202ENST00000561976 USP6NLQ92738 828 aa14.45□□□□□ -0.1
VPS9D1-202ENST00000561976 LRRC39Q96DD0 335 aa14.45□□□□□ -0.1
VPS9D1-202ENST00000561976 EBNA1BP2Q99848 306 aaKnown RBP14.45□□□□□ -0.1
VPS9D1-202ENST00000561976 ACAD9Q9H845 621 aa14.45□□□□□ -0.1
VPS9D1-202ENST00000561976 IL1RAPL1Q9NZN1 696 aa14.45□□□□□ -0.1
VPS9D1-202ENST00000561976 SRCAPQ6ZRS2 3230 aa14.44□□□□□ -0.1
VPS9D1-202ENST00000561976 FAM159BA6NKW6 160 aa14.44□□□□□ -0.1
VPS9D1-202ENST00000561976 TXNDC9O14530 226 aa14.44□□□□□ -0.1
VPS9D1-202ENST00000561976 PROCP04070 461 aa14.44□□□□□ -0.1
VPS9D1-202ENST00000561976 KCNA4P22459 653 aa14.44□□□□□ -0.1
VPS9D1-202ENST00000561976 SLC1A6P48664 564 aa14.44□□□□□ -0.1
VPS9D1-202ENST00000561976 TMEM132BQ14DG7 1078 aa14.44□□□□□ -0.1
VPS9D1-202ENST00000561976 DPY19L2Q6NUT2 758 aa14.44□□□□□ -0.1
VPS9D1-202ENST00000561976 CASC4Q6P4E1 433 aa14.44□□□□□ -0.1
VPS9D1-202ENST00000561976 ACAD11Q709F0 780 aa14.44□□□□□ -0.1
VPS9D1-202ENST00000561976 MARK2Q7KZI7 788 aaKnown RBP14.44□□□□□ -0.1
VPS9D1-202ENST00000561976 PDSS2Q86YH6 399 aa14.44□□□□□ -0.1
VPS9D1-202ENST00000561976 OLFM3Q96PB7 478 aa14.44□□□□□ -0.1
VPS9D1-202ENST00000561976 CCDC28BQ9BUN5 200 aa14.44□□□□□ -0.1
VPS9D1-202ENST00000561976 KLHL4Q9C0H6 718 aa14.44□□□□□ -0.1
VPS9D1-202ENST00000561976 ELOVL4Q9GZR5 314 aa14.44□□□□□ -0.1
VPS9D1-202ENST00000561976 ZNF214Q9UL59 606 aaPredicted RBP14.44□□□□□ -0.1
VPS9D1-202ENST00000561976 YY1P25490 414 aa14.44□□□□□ -0.1
VPS9D1-202ENST00000561976 STAT5BP51692 787 aa14.44□□□□□ -0.1
VPS9D1-202ENST00000561976 SFT2D3Q587I9 215 aa14.44□□□□□ -0.1
VPS9D1-202ENST00000561976 PPP6R3Q5H9R7 873 aaPredicted RBP14.44□□□□□ -0.1
VPS9D1-202ENST00000561976 CYP4V2Q6ZWL3 525 aaPredicted RBP14.44□□□□□ -0.1
VPS9D1-202ENST00000561976 LRRC71Q8N4P6 559 aa14.44□□□□□ -0.1
VPS9D1-202ENST00000561976 CCDC33Q8N5R6 958 aa14.44□□□□□ -0.1
VPS9D1-202ENST00000561976 MTMR14Q8NCE2 650 aa14.44□□□□□ -0.1
VPS9D1-202ENST00000561976 PPP4R1Q8TF05 950 aa14.44□□□□□ -0.1
VPS9D1-202ENST00000561976 TMEM176AQ96HP8 235 aa14.44□□□□□ -0.1
VPS9D1-202ENST00000561976 SORBS2O94875 1100 aaKnown RBP14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 ETS2P15036 469 aa14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 NCF2P19878 526 aaPredicted RBP14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 TGM2P21980 687 aa14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 GPD2P43304 727 aa14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 BACE1P56817 501 aa14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 LAMTOR4Q0VGL1 99 aa14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 FSTL1Q12841 308 aa14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 N4BP2L1Q5TBK1 243 aaPredicted RBP14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 TRNP1Q6NT89 227 aa14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 ADGRG6Q86SQ4 1221 aa14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 GDPD5Q8WTR4 605 aa14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 PIWIL1Q96J94 861 aaKnown RBP14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 SIGLEC10Q96LC7 697 aa14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 ZNF778Q96MU6 729 aa14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 LOC100653049A0A140TA62 436 aa14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 BCLAF3A2AJT9 711 aaKnown RBP14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 C2CD4BA6NLJ0 364 aa14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 F5H423 210 aaPredicted RBP14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 SIN3BO75182 1162 aa14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 MAFO75444 373 aaPredicted RBP14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 KRT34O76011 436 aa14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 METTL18O95568 372 aa14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 CXCL8P10145 99 aa14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 GABRB2P47870 512 aa14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 HMGCS2P54868 508 aa14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 HNRNPDQ14103 355 aaKnown RBP14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 PDK2Q15119 407 aa14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 TARBP2Q15633 366 aaKnown RBP14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 TRIP10Q15642 601 aa14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 PDCD2Q16342 344 aaPredicted RBP14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 TEDDM1Q5T9Z0 273 aa14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 FAM43BQ6ZT52 329 aaPredicted RBP14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 PQLC3Q8N755 202 aa14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 REPS2Q8NFH8 660 aa14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 PCDH19Q8TAB3 1148 aa14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 AZIN2Q96A70 460 aa14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 RTP4Q96DX8 246 aa14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 SIKE1Q9BRV8 207 aa14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 BCO2Q9BYV7 579 aa14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 QTRT2Q9H974 415 aaKnown RBP14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 ADAMTS6Q9UKP5 1117 aa14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 PCDHA11Q9Y5I1 949 aa14.43□□□□□ -0.1
VPS9D1-202ENST00000561976 INO80B-WBP1J3KQ70 363 aa14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 LGR5O75473 907 aa14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 UQCRBP14927 111 aa14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 IL4RP24394 825 aa14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 PEX2P28328 305 aa14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 GRIA1P42261 906 aa14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 AQP4P55087 323 aa14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 TUBB3Q13509 450 aa14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 SMAD1Q15797 465 aaKnown RBP14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 MMEL1Q495T6 779 aa14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 MBLAC2Q68D91 279 aa14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 MPZL3Q6UWV2 235 aa14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 FAM183BPQ6ZVS7 135 aa14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 UNC5BQ8IZJ1 945 aa14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 EFCAB3Q8N7B9 438 aa14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 MCUQ8NE86 351 aa14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 AGBL3Q8NEM8 1001 aa14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 ATP2A3Q93084 1043 aa14.42□□□□□ -0.1
VPS9D1-202ENST00000561976 PCYT2Q99447 389 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms