RNA–Protein interactions for RNA: ENST00000561707.1

COTL1-202, Transcript of coactosin like F-actin binding protein 1, humanhuman

TSL 1 (best)

Gene COTL1, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-202ENST00000561707 CEP104O60308 925 aa13.36□□□□□ -0.27
COTL1-202ENST00000561707 IGLV3-25P01717 112 aa13.36□□□□□ -0.27
COTL1-202ENST00000561707 PTPN2P17706 415 aa13.36□□□□□ -0.27
COTL1-202ENST00000561707 GABRR2P28476 465 aa13.36□□□□□ -0.27
COTL1-202ENST00000561707 RDXP35241 583 aaKnown RBP13.36□□□□□ -0.27
COTL1-202ENST00000561707 PSEN1P49768 467 aa13.36□□□□□ -0.27
COTL1-202ENST00000561707 RWDD2BP57060 319 aa13.36□□□□□ -0.27
COTL1-202ENST00000561707 EIF4EBP2Q13542 120 aaPredicted RBP13.36□□□□□ -0.27
COTL1-202ENST00000561707 KCNC3Q14003 757 aa13.36□□□□□ -0.27
COTL1-202ENST00000561707 ZC3H12AQ5D1E8 599 aaKnown RBP13.36□□□□□ -0.27
COTL1-202ENST00000561707 HECTD3Q5T447 861 aa13.36□□□□□ -0.27
COTL1-202ENST00000561707 ZFYVE27Q5T4F4 411 aa13.36□□□□□ -0.27
COTL1-202ENST00000561707 LRRC38Q5VT99 294 aa13.36□□□□□ -0.27
COTL1-202ENST00000561707 SNX30Q5VWJ9 437 aa13.36□□□□□ -0.27
COTL1-202ENST00000561707 RTL10Q7L3V2 364 aa13.36□□□□□ -0.27
COTL1-202ENST00000561707 ELMOD1Q8N336 334 aa13.36□□□□□ -0.27
COTL1-202ENST00000561707 PDZD8Q8NEN9 1154 aa13.36□□□□□ -0.27
COTL1-202ENST00000561707 OVCA2Q8WZ82 227 aa13.36□□□□□ -0.27
COTL1-202ENST00000561707 HSPH1Q92598 858 aa13.36□□□□□ -0.27
COTL1-202ENST00000561707 TCEAL4Q96EI5 215 aa13.36□□□□□ -0.27
COTL1-202ENST00000561707 PGAP3Q96FM1 320 aaPredicted RBP13.36□□□□□ -0.27
COTL1-202ENST00000561707 PBKQ96KB5 322 aa13.36□□□□□ -0.27
COTL1-202ENST00000561707 CYP2S1Q96SQ9 504 aa13.36□□□□□ -0.27
COTL1-202ENST00000561707 TRIM62Q9BVG3 475 aa13.36□□□□□ -0.27
COTL1-202ENST00000561707 PRKD2Q9BZL6 878 aa13.36□□□□□ -0.27
COTL1-202ENST00000561707 RASAL2Q9UJF2 1139 aa13.36□□□□□ -0.27
COTL1-202ENST00000561707 CDC23Q9UJX2 597 aa13.36□□□□□ -0.27
COTL1-202ENST00000561707 SNX10Q9Y5X0 201 aa13.36□□□□□ -0.27
COTL1-202ENST00000561707 A0A1W2PPC1 479 aa13.35□□□□□ -0.27
COTL1-202ENST00000561707 SLC12A8A0AV02 714 aa13.35□□□□□ -0.27
COTL1-202ENST00000561707 I6L893 689 aaPredicted RBP13.35□□□□□ -0.27
COTL1-202ENST00000561707 COCHO43405 550 aa13.35□□□□□ -0.27
COTL1-202ENST00000561707 TLR5O60602 858 aa13.35□□□□□ -0.27
COTL1-202ENST00000561707 F9P00740 461 aa13.35□□□□□ -0.27
COTL1-202ENST00000561707 KRT1P04264 644 aa13.35□□□□□ -0.27
COTL1-202ENST00000561707 HMBSP08397 361 aa13.35□□□□□ -0.27
COTL1-202ENST00000561707 HNRNPA1P09651 372 aaKnown RBP eCLIP13.35□□□□□ -0.27
COTL1-202ENST00000561707 TCP1P17987 556 aaKnown RBP13.35□□□□□ -0.27
COTL1-202ENST00000561707 GBP1P32455 592 aa13.35□□□□□ -0.27
COTL1-202ENST00000561707 ADRA1BP35368 520 aa13.35□□□□□ -0.27
COTL1-202ENST00000561707 CCR2P41597 374 aa13.35□□□□□ -0.27
COTL1-202ENST00000561707 CXCR3P49682 368 aa13.35□□□□□ -0.27
COTL1-202ENST00000561707 ARSEP51690 589 aa13.35□□□□□ -0.27
COTL1-202ENST00000561707 CYP4F8P98187 520 aa13.35□□□□□ -0.27
COTL1-202ENST00000561707 BOLA3Q53S33 107 aa13.35□□□□□ -0.27
COTL1-202ENST00000561707 ERMARDQ5T6L9 678 aa13.35□□□□□ -0.27
COTL1-202ENST00000561707 TXNDC8Q6A555 127 aa13.35□□□□□ -0.27
COTL1-202ENST00000561707 MFSD7Q6UXD7 560 aa13.35□□□□□ -0.27
COTL1-202ENST00000561707 MIB1Q86YT6 1006 aa13.35□□□□□ -0.27
COTL1-202ENST00000561707 CREG2Q8IUH2 290 aa13.35□□□□□ -0.27
COTL1-202ENST00000561707 KATNAL2Q8IYT4 538 aa13.35□□□□□ -0.27
COTL1-202ENST00000561707 RCOR2Q8IZ40 523 aa13.35□□□□□ -0.27
COTL1-202ENST00000561707 PYROXD2Q8N2H3 581 aa13.35□□□□□ -0.27
COTL1-202ENST00000561707 CMASQ8NFW8 434 aaPredicted RBP13.35□□□□□ -0.27
COTL1-202ENST00000561707 UBE2Q2Q8WVN8 375 aa13.35□□□□□ -0.27
COTL1-202ENST00000561707 RNF34Q969K3 372 aa13.35□□□□□ -0.27
COTL1-202ENST00000561707 ZNF707Q96C28 371 aaPredicted RBP13.35□□□□□ -0.27
COTL1-202ENST00000561707 SLC22A12Q96S37 553 aa13.35□□□□□ -0.27
COTL1-202ENST00000561707 NCAPGQ9BPX3 1015 aa13.35□□□□□ -0.27
COTL1-202ENST00000561707 SNRNP25Q9BV90 132 aaKnown RBP13.35□□□□□ -0.27
COTL1-202ENST00000561707 APOL5Q9BWW9 433 aa13.35□□□□□ -0.27
COTL1-202ENST00000561707 SMOC2Q9H3U7 446 aa13.35□□□□□ -0.27
COTL1-202ENST00000561707 NSUN3Q9H649 340 aaKnown RBP13.35□□□□□ -0.27
COTL1-202ENST00000561707 GKN1Q9NS71 199 aa13.35□□□□□ -0.27
COTL1-202ENST00000561707 MARCH2Q9P0N8 246 aa13.35□□□□□ -0.27
COTL1-202ENST00000561707 UXTQ9UBK9 157 aaPredicted RBP13.35□□□□□ -0.27
COTL1-202ENST00000561707 FZD10Q9ULW2 581 aa13.35□□□□□ -0.27
COTL1-202ENST00000561707 MRFAP1Q9Y605 127 aa13.35□□□□□ -0.27
COTL1-202ENST00000561707 C3orf70A6NLC5 250 aaPredicted RBP13.34□□□□□ -0.27
COTL1-202ENST00000561707 SPDYE4A6NLX3 237 aa13.34□□□□□ -0.27
COTL1-202ENST00000561707 IRAK2O43187 625 aa13.34□□□□□ -0.27
COTL1-202ENST00000561707 MOSPD3O75425 235 aa13.34□□□□□ -0.27
COTL1-202ENST00000561707 ZRANB2O95218 330 aaKnown RBP eCLIP13.34□□□□□ -0.27
COTL1-202ENST00000561707 GLP2RO95838 553 aa13.34□□□□□ -0.27
COTL1-202ENST00000561707 RHOP08100 348 aa13.34□□□□□ -0.27
COTL1-202ENST00000561707 KRT7P08729 469 aa13.34□□□□□ -0.27
COTL1-202ENST00000561707 CD48P09326 243 aa13.34□□□□□ -0.27
COTL1-202ENST00000561707 DESP17661 470 aa13.34□□□□□ -0.27
COTL1-202ENST00000561707 KDELR1P24390 212 aa13.34□□□□□ -0.27
COTL1-202ENST00000561707 HOXA9P31269 272 aa13.34□□□□□ -0.27
COTL1-202ENST00000561707 ATP5C1P36542 298 aaKnown RBP13.34□□□□□ -0.27
COTL1-202ENST00000561707 TBX4P57082 545 aa13.34□□□□□ -0.27
COTL1-202ENST00000561707 MMRN1Q13201 1228 aa13.34□□□□□ -0.27
COTL1-202ENST00000561707 ADGRE1Q14246 886 aa13.34□□□□□ -0.27
COTL1-202ENST00000561707 PABPC1LQ4VXU2 614 aaKnown RBP13.34□□□□□ -0.27
COTL1-202ENST00000561707 TMC5Q6UXY8 1006 aa13.34□□□□□ -0.27
COTL1-202ENST00000561707 GRASPQ7Z6J2 395 aaPredicted RBP13.34□□□□□ -0.27
COTL1-202ENST00000561707 ZNF276Q8N554 614 aa13.34□□□□□ -0.27
COTL1-202ENST00000561707 ARL14EPQ8N8R7 260 aaPredicted RBP13.34□□□□□ -0.27
COTL1-202ENST00000561707 KCTD6Q8NC69 237 aa13.34□□□□□ -0.27
COTL1-202ENST00000561707 EXD1Q8NHP7 514 aa13.34□□□□□ -0.27
COTL1-202ENST00000561707 SHKBP1Q8TBC3 707 aa13.34□□□□□ -0.27
COTL1-202ENST00000561707 WBP2Q969T9 261 aa13.34□□□□□ -0.27
COTL1-202ENST00000561707 LRCH3Q96II8 777 aa13.34□□□□□ -0.27
COTL1-202ENST00000561707 FCRL2Q96LA5 508 aaPredicted RBP13.34□□□□□ -0.27
COTL1-202ENST00000561707 FAM161BQ96MY7 647 aa13.34□□□□□ -0.27
COTL1-202ENST00000561707 CDCA3Q99618 268 aaPredicted RBP13.34□□□□□ -0.27
COTL1-202ENST00000561707 HERPUD2Q9BSE4 406 aa13.34□□□□□ -0.27
COTL1-202ENST00000561707 HEMGNQ9BXL5 484 aa13.34□□□□□ -0.27
COTL1-202ENST00000561707 ATXN3LQ9H3M9 355 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms