RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 PRRX2Q99811 253 aa4.33□□□□□ -1.72
HERC1-215ENST00000561436 TPSD1Q9BZJ3 242 aa4.33□□□□□ -1.72
HERC1-215ENST00000561436 SMOC2Q9H3U7 446 aa4.33□□□□□ -1.72
HERC1-215ENST00000561436 TMEM74BQ9NUR3 256 aa4.33□□□□□ -1.72
HERC1-215ENST00000561436 SYBUQ9NX95 663 aa4.33□□□□□ -1.72
HERC1-215ENST00000561436 LRFN1Q9P244 771 aa4.33□□□□□ -1.72
HERC1-215ENST00000561436 CA14Q9ULX7 337 aa4.33□□□□□ -1.72
HERC1-215ENST00000561436 EPN1Q9Y6I3 576 aaPredicted RBP4.33□□□□□ -1.72
HERC1-215ENST00000561436 NWD2Q9ULI1 1742 aa4.32□□□□□ -1.72
HERC1-215ENST00000561436 TMEM191CA6NGB0 347 aa4.32□□□□□ -1.72
HERC1-215ENST00000561436 SYT5O00445 386 aa4.32□□□□□ -1.72
HERC1-215ENST00000561436 MGST3O14880 152 aa4.32□□□□□ -1.72
HERC1-215ENST00000561436 NDST3O95803 873 aa4.32□□□□□ -1.72
HERC1-215ENST00000561436 GLP2RO95838 553 aa4.32□□□□□ -1.72
HERC1-215ENST00000561436 EGR2P11161 476 aaPredicted RBP4.32□□□□□ -1.72
HERC1-215ENST00000561436 EGR1P18146 543 aa4.32□□□□□ -1.72
HERC1-215ENST00000561436 EPHA3P29320 983 aa4.32□□□□□ -1.72
HERC1-215ENST00000561436 TOB1P50616 345 aaPredicted RBP4.32□□□□□ -1.72
HERC1-215ENST00000561436 ITIH3Q06033 890 aa4.32□□□□□ -1.72
HERC1-215ENST00000561436 NSUN2Q08J23 767 aaKnown RBP eCLIP4.32□□□□□ -1.72
HERC1-215ENST00000561436 CCNIQ14094 377 aa4.32□□□□□ -1.72
HERC1-215ENST00000561436 BOP1Q14137 746 aaKnown RBP4.32□□□□□ -1.72
HERC1-215ENST00000561436 NPY5RQ15761 445 aa4.32□□□□□ -1.72
HERC1-215ENST00000561436 RAB30Q15771 203 aa4.32□□□□□ -1.72
HERC1-215ENST00000561436 MAPKAPK3Q16644 382 aa4.32□□□□□ -1.72
HERC1-215ENST00000561436 ZNF750Q32MQ0 723 aa4.32□□□□□ -1.72
HERC1-215ENST00000561436 FCRL6Q6DN72 434 aa4.32□□□□□ -1.72
HERC1-215ENST00000561436 CRTC1Q6UUV9 634 aa4.32□□□□□ -1.72
HERC1-215ENST00000561436 MYCT1Q8N699 235 aa4.32□□□□□ -1.72
HERC1-215ENST00000561436 Q8NA96 180 aa4.32□□□□□ -1.72
HERC1-215ENST00000561436 OSCP1Q8WVF1 389 aa4.32□□□□□ -1.72
HERC1-215ENST00000561436 TRAPPC12Q8WVT3 735 aa4.32□□□□□ -1.72
HERC1-215ENST00000561436 ATRIPQ8WXE1 791 aa4.32□□□□□ -1.72
HERC1-215ENST00000561436 PCDHAC1Q9H158 963 aa4.32□□□□□ -1.72
HERC1-215ENST00000561436 SLC25A32Q9H2D1 315 aa4.32□□□□□ -1.72
HERC1-215ENST00000561436 CXorf36Q9H7Y0 433 aa4.32□□□□□ -1.72
HERC1-215ENST00000561436 UNKLQ9H9P5 680 aaKnown RBP4.32□□□□□ -1.72
HERC1-215ENST00000561436 TMEM8AQ9HCN3 771 aa4.32□□□□□ -1.72
HERC1-215ENST00000561436 DACT1Q9NYF0 836 aa4.32□□□□□ -1.72
HERC1-215ENST00000561436 DNAJB11Q9UBS4 358 aa4.32□□□□□ -1.72
HERC1-215ENST00000561436 DKK4Q9UBT3 224 aa4.32□□□□□ -1.72
HERC1-215ENST00000561436 NDRG4Q9ULP0 352 aaKnown RBP4.32□□□□□ -1.72
HERC1-215ENST00000561436 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.32□□□□□ -1.72
HERC1-215ENST00000561436 COL14A1Q05707 1796 aaKnown RBP4.32□□□□□ -1.72
HERC1-215ENST00000561436 THSD7AQ9UPZ6 1657 aa4.32□□□□□ -1.72
HERC1-215ENST00000561436 ADGRB1O14514 1584 aa4.31□□□□□ -1.72
HERC1-215ENST00000561436 COL5A2P05997 1499 aaPredicted RBP4.31□□□□□ -1.72
HERC1-215ENST00000561436 EVC2Q86UK5 1308 aa4.31□□□□□ -1.72
HERC1-215ENST00000561436 PIPSLA2A3N6 862 aa4.31□□□□□ -1.72
HERC1-215ENST00000561436 hCG_1984214I3L0E3 225 aa4.31□□□□□ -1.72
HERC1-215ENST00000561436 OVOL3O00110 214 aa4.31□□□□□ -1.72
HERC1-215ENST00000561436 KIAA0355O15063 1070 aa4.31□□□□□ -1.72
HERC1-215ENST00000561436 CD3EAPO15446 510 aaKnown RBP4.31□□□□□ -1.72
HERC1-215ENST00000561436 KCNQ3O43525 872 aa4.31□□□□□ -1.72
HERC1-215ENST00000561436 TLR5O60602 858 aa4.31□□□□□ -1.72
HERC1-215ENST00000561436 KCNA3P22001 575 aa4.31□□□□□ -1.72
HERC1-215ENST00000561436 GABRB3P28472 473 aa4.31□□□□□ -1.72
HERC1-215ENST00000561436 SLC5A2P31639 672 aa4.31□□□□□ -1.72
HERC1-215ENST00000561436 ATICP31939 592 aa4.31□□□□□ -1.72
HERC1-215ENST00000561436 SEC24CP53992 1094 aa4.31□□□□□ -1.72
HERC1-215ENST00000561436 NXPH1P58417 271 aa4.31□□□□□ -1.72
HERC1-215ENST00000561436 BLOC1S1P78537 153 aa4.31□□□□□ -1.72
HERC1-215ENST00000561436 GPS1Q13098 491 aa4.31□□□□□ -1.72
HERC1-215ENST00000561436 PRKG1Q13976 671 aa4.31□□□□□ -1.72
HERC1-215ENST00000561436 SPARCL1Q14515 664 aa4.31□□□□□ -1.72
HERC1-215ENST00000561436 PFKFB4Q16877 469 aa4.31□□□□□ -1.72
HERC1-215ENST00000561436 SLC5A9Q2M3M2 681 aa4.31□□□□□ -1.72
HERC1-215ENST00000561436 TMPRSS9Q7Z410 1059 aa4.31□□□□□ -1.72
HERC1-215ENST00000561436 ZNF280BQ86YH2 543 aa4.31□□□□□ -1.72
HERC1-215ENST00000561436 CCDC28AQ8IWP9 274 aa4.31□□□□□ -1.72
HERC1-215ENST00000561436 NKAPQ8N5F7 415 aaKnown RBP4.31□□□□□ -1.72
HERC1-215ENST00000561436 ATG16L2Q8NAA4 619 aa4.31□□□□□ -1.72
HERC1-215ENST00000561436 SUPT20HQ8NEM7 779 aa4.31□□□□□ -1.72
HERC1-215ENST00000561436 DNAJB14Q8TBM8 379 aa4.31□□□□□ -1.72
HERC1-215ENST00000561436 FAM71BQ8TC56 605 aa4.31□□□□□ -1.72
HERC1-215ENST00000561436 SSH3Q8TE77 659 aa4.31□□□□□ -1.72
HERC1-215ENST00000561436 IPO4Q8TEX9 1081 aaKnown RBP4.31□□□□□ -1.72
HERC1-215ENST00000561436 GRAMD1AQ96CP6 724 aa4.31□□□□□ -1.72
HERC1-215ENST00000561436 PRPF18Q99633 342 aaKnown RBP4.31□□□□□ -1.72
HERC1-215ENST00000561436 ISCA1Q9BUE6 129 aa4.31□□□□□ -1.72
HERC1-215ENST00000561436 ACTRT3Q9BYD9 372 aa4.31□□□□□ -1.72
HERC1-215ENST00000561436 INO80BQ9C086 356 aaPredicted RBP4.31□□□□□ -1.72
HERC1-215ENST00000561436 PRDM13Q9H4Q3 707 aa4.31□□□□□ -1.72
HERC1-215ENST00000561436 OBP2BQ9NPH6 170 aa4.31□□□□□ -1.72
HERC1-215ENST00000561436 CASS4Q9NQ75 786 aa4.31□□□□□ -1.72
HERC1-215ENST00000561436 HELLSQ9NRZ9 838 aa4.31□□□□□ -1.72
HERC1-215ENST00000561436 DNMT3BQ9UBC3 853 aaKnown RBP4.31□□□□□ -1.72
HERC1-215ENST00000561436 SERTAD3Q9UJW9 196 aa4.31□□□□□ -1.72
HERC1-215ENST00000561436 PACSIN3Q9UKS6 424 aa4.31□□□□□ -1.72
HERC1-215ENST00000561436 ZMYND8Q9ULU4 1186 aaPredicted RBP4.31□□□□□ -1.72
HERC1-215ENST00000561436 USP22Q9UPT9 525 aa4.31□□□□□ -1.72
HERC1-215ENST00000561436 HPSEQ9Y251 543 aa4.31□□□□□ -1.72
HERC1-215ENST00000561436 TBC1D30Q9Y2I9 924 aa4.31□□□□□ -1.72
HERC1-215ENST00000561436 MRPS17Q9Y2R5 130 aaKnown RBP4.31□□□□□ -1.72
HERC1-215ENST00000561436 CGNL1Q0VF96 1302 aa4.3□□□□□ -1.72
HERC1-215ENST00000561436 CENPJQ9HC77 1338 aaPredicted RBP4.3□□□□□ -1.72
HERC1-215ENST00000561436 LGALS16A8MUM7 142 aa4.3□□□□□ -1.72
HERC1-215ENST00000561436 PSMD9O00233 223 aa4.3□□□□□ -1.72
HERC1-215ENST00000561436 PIP5K1BO14986 540 aa4.3□□□□□ -1.72
HERC1-215ENST00000561436 IRAK2O43187 625 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms