RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 GTPBP4Q9BZE4 634 aaKnown RBP6.67□□□□□ -1.34
LRRC28-220ENST00000561253 TMEM60Q9H2L4 133 aa6.67□□□□□ -1.34
LRRC28-220ENST00000561253 C12orf65Q9H3J6 166 aaKnown RBP6.67□□□□□ -1.34
LRRC28-220ENST00000561253 AGO4Q9HCK5 861 aaKnown RBP6.67□□□□□ -1.34
LRRC28-220ENST00000561253 IPPQ9Y573 584 aa6.67□□□□□ -1.34
LRRC28-220ENST00000561253 KIAA1217Q5T5P2 1943 aa6.67□□□□□ -1.34
LRRC28-220ENST00000561253 SCN10AQ9Y5Y9 1956 aa6.66□□□□□ -1.34
LRRC28-220ENST00000561253 IGKV6D-21A0A0A0MT36 114 aa6.66□□□□□ -1.34
LRRC28-220ENST00000561253 B4DLN1 442 aa6.66□□□□□ -1.34
LRRC28-220ENST00000561253 STX6O43752 255 aa6.66□□□□□ -1.34
LRRC28-220ENST00000561253 PSMD10O75832 226 aa6.66□□□□□ -1.34
LRRC28-220ENST00000561253 CNOT4O95628 575 aaKnown RBP6.66□□□□□ -1.34
LRRC28-220ENST00000561253 GGPS1O95749 300 aa6.66□□□□□ -1.34
LRRC28-220ENST00000561253 CCNE2O96020 404 aa6.66□□□□□ -1.34
LRRC28-220ENST00000561253 GASTP01350 101 aa6.66□□□□□ -1.34
LRRC28-220ENST00000561253 TXNP10599 105 aaKnown RBP6.66□□□□□ -1.34
LRRC28-220ENST00000561253 RARBP10826 455 aa6.66□□□□□ -1.34
LRRC28-220ENST00000561253 GYPEP15421 78 aa6.66□□□□□ -1.34
LRRC28-220ENST00000561253 GCFC2P16383 781 aaKnown RBP6.66□□□□□ -1.34
LRRC28-220ENST00000561253 EN2P19622 333 aaPredicted RBP6.66□□□□□ -1.34
LRRC28-220ENST00000561253 TRAPPC10P48553 1259 aa6.66□□□□□ -1.34
LRRC28-220ENST00000561253 PPP2CBP62714 309 aa6.66□□□□□ -1.34
LRRC28-220ENST00000561253 PPP2CAP67775 309 aa6.66□□□□□ -1.34
LRRC28-220ENST00000561253 HSDL1Q3SXM5 330 aa6.66□□□□□ -1.34
LRRC28-220ENST00000561253 PRR16Q569H4 304 aa6.66□□□□□ -1.34
LRRC28-220ENST00000561253 CELF3Q5SZQ8 465 aaKnown RBP6.66□□□□□ -1.34
LRRC28-220ENST00000561253 LILRA6Q6PI73 481 aa6.66□□□□□ -1.34
LRRC28-220ENST00000561253 KCNV1Q6PIU1 500 aa6.66□□□□□ -1.34
LRRC28-220ENST00000561253 USP45Q70EL2 814 aa6.66□□□□□ -1.34
LRRC28-220ENST00000561253 TLK2Q86UE8 772 aa6.66□□□□□ -1.34
LRRC28-220ENST00000561253 PLA2G4DQ86XP0 818 aa6.66□□□□□ -1.34
LRRC28-220ENST00000561253 OR2I1PQ8NGU4 316 aa6.66□□□□□ -1.34
LRRC28-220ENST00000561253 PPTC7Q8NI37 304 aa6.66□□□□□ -1.34
LRRC28-220ENST00000561253 DIS3LQ8TF46 1054 aaKnown RBP6.66□□□□□ -1.34
LRRC28-220ENST00000561253 AFG1LQ8WV93 481 aa6.66□□□□□ -1.34
LRRC28-220ENST00000561253 KAT2BQ92831 832 aa6.66□□□□□ -1.34
LRRC28-220ENST00000561253 GJA10Q969M2 543 aa6.66□□□□□ -1.34
LRRC28-220ENST00000561253 RELTQ969Z4 430 aa6.66□□□□□ -1.34
LRRC28-220ENST00000561253 PCYT2Q99447 389 aa6.66□□□□□ -1.34
LRRC28-220ENST00000561253 BCO1Q9HAY6 547 aa6.66□□□□□ -1.34
LRRC28-220ENST00000561253 XPNPEP3Q9NQH7 507 aa6.66□□□□□ -1.34
LRRC28-220ENST00000561253 GEMIN8Q9NWZ8 242 aaKnown RBP6.66□□□□□ -1.34
LRRC28-220ENST00000561253 KIF3AQ9Y496 699 aa6.66□□□□□ -1.34
LRRC28-220ENST00000561253 GRIN2DO15399 1336 aa6.66□□□□□ -1.34
LRRC28-220ENST00000561253 NFASCO94856 1347 aa6.66□□□□□ -1.34
LRRC28-220ENST00000561253 FRMPD3Q5JV73 1810 aa6.66□□□□□ -1.34
LRRC28-220ENST00000561253 CCDC194A0A1B0GVG4 234 aa6.65□□□□□ -1.34
LRRC28-220ENST00000561253 GSTTP1A0A1W2PQM5 241 aa6.65□□□□□ -1.34
LRRC28-220ENST00000561253 HAS3O00219 553 aa6.65□□□□□ -1.34
LRRC28-220ENST00000561253 IPO5O00410 1097 aaKnown RBP6.65□□□□□ -1.34
LRRC28-220ENST00000561253 DNM1LO00429 736 aa6.65□□□□□ -1.34
LRRC28-220ENST00000561253 TBX3O15119 743 aa6.65□□□□□ -1.34
LRRC28-220ENST00000561253 SLC26A4O43511 780 aa6.65□□□□□ -1.34
LRRC28-220ENST00000561253 ITGA10O75578 1167 aa6.65□□□□□ -1.34
LRRC28-220ENST00000561253 GH1P01241 217 aa6.65□□□□□ -1.34
LRRC28-220ENST00000561253 RPLP2P05387 115 aaKnown RBP6.65□□□□□ -1.34
LRRC28-220ENST00000561253 MMP3P08254 477 aa6.65□□□□□ -1.34
LRRC28-220ENST00000561253 CAPN2P17655 700 aa6.65□□□□□ -1.34
LRRC28-220ENST00000561253 HOXC8P31273 242 aa6.65□□□□□ -1.34
LRRC28-220ENST00000561253 CRHR1P34998 444 aa6.65□□□□□ -1.34
LRRC28-220ENST00000561253 BEX3Q00994 111 aa6.65□□□□□ -1.34
LRRC28-220ENST00000561253 SETQ01105 290 aaPredicted RBP6.65□□□□□ -1.34
LRRC28-220ENST00000561253 ORC2Q13416 577 aaPredicted RBP6.65□□□□□ -1.34
LRRC28-220ENST00000561253 TRIM29Q14134 588 aa6.65□□□□□ -1.34
LRRC28-220ENST00000561253 ZNF267Q14586 743 aaPredicted RBP6.65□□□□□ -1.34
LRRC28-220ENST00000561253 SAFBQ15424 915 aaKnown RBP eCLIP6.65□□□□□ -1.34
LRRC28-220ENST00000561253 LETM2Q2VYF4 491 aa6.65□□□□□ -1.34
LRRC28-220ENST00000561253 FAM173BQ6P4H8 233 aa6.65□□□□□ -1.34
LRRC28-220ENST00000561253 Q6ZVL8 140 aa6.65□□□□□ -1.34
LRRC28-220ENST00000561253 GRAMD1CQ8IYS0 662 aa6.65□□□□□ -1.34
LRRC28-220ENST00000561253 CMTM4Q8IZR5 234 aa6.65□□□□□ -1.34
LRRC28-220ENST00000561253 PQLC1Q8N2U9 271 aa6.65□□□□□ -1.34
LRRC28-220ENST00000561253 OR7D4Q8NG98 312 aa6.65□□□□□ -1.34
LRRC28-220ENST00000561253 OR5M3Q8NGP4 307 aa6.65□□□□□ -1.34
LRRC28-220ENST00000561253 FEZF2Q8TBJ5 459 aa6.65□□□□□ -1.34
LRRC28-220ENST00000561253 CFHR4Q92496 578 aa6.65□□□□□ -1.34
LRRC28-220ENST00000561253 HOXB13Q92826 284 aaPredicted RBP6.65□□□□□ -1.34
LRRC28-220ENST00000561253 HPS3Q969F9 1004 aa6.65□□□□□ -1.34
LRRC28-220ENST00000561253 NEIL1Q96FI4 390 aaPredicted RBP6.65□□□□□ -1.34
LRRC28-220ENST00000561253 CDHR1Q96JP9 859 aa6.65□□□□□ -1.34
LRRC28-220ENST00000561253 CTAGE1Q96RT6 745 aa6.65□□□□□ -1.34
LRRC28-220ENST00000561253 LMF1Q96S06 567 aa6.65□□□□□ -1.34
LRRC28-220ENST00000561253 MPHOSPH6Q99547 160 aaKnown RBP6.65□□□□□ -1.34
LRRC28-220ENST00000561253 RIT2Q99578 217 aa6.65□□□□□ -1.34
LRRC28-220ENST00000561253 GPR20Q99678 358 aa6.65□□□□□ -1.34
LRRC28-220ENST00000561253 DPYSL5Q9BPU6 564 aa6.65□□□□□ -1.34
LRRC28-220ENST00000561253 C16orf70Q9BSU1 422 aa6.65□□□□□ -1.34
LRRC28-220ENST00000561253 MANSC1Q9H8J5 431 aa6.65□□□□□ -1.34
LRRC28-220ENST00000561253 ANLNQ9NQW6 1124 aa6.65□□□□□ -1.34
LRRC28-220ENST00000561253 PCDHA13Q9Y5I0 950 aa6.65□□□□□ -1.34
LRRC28-220ENST00000561253 MORC2Q9Y6X9 1032 aaPredicted RBP6.65□□□□□ -1.34
LRRC28-220ENST00000561253 ADAMTS20P59510 1910 aa6.65□□□□□ -1.34
LRRC28-220ENST00000561253 SZT2Q5T011 3432 aa6.65□□□□□ -1.35
LRRC28-220ENST00000561253 CHD9Q3L8U1 2897 aa6.65□□□□□ -1.35
LRRC28-220ENST00000561253 VSTM5A8MXK1 200 aa6.64□□□□□ -1.35
LRRC28-220ENST00000561253 CDC14BO60729 498 aa6.64□□□□□ -1.35
LRRC28-220ENST00000561253 PPFIA4O75335 1185 aa6.64□□□□□ -1.35
LRRC28-220ENST00000561253 STBD1O95210 358 aa6.64□□□□□ -1.35
LRRC28-220ENST00000561253 CNR2P34972 360 aa6.64□□□□□ -1.35
LRRC28-220ENST00000561253 RGS19P49795 217 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms