RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 PRCCQ92733 491 aaPredicted RBP19.54■□□□□ 0.72
TPM1-226ENST00000560959 COL26A1Q96A83 441 aa19.54■□□□□ 0.72
TPM1-226ENST00000560959 ERLEC1Q96DZ1 483 aa19.54■□□□□ 0.72
TPM1-226ENST00000560959 TRIM9Q9C026 710 aa19.54■□□□□ 0.72
TPM1-226ENST00000560959 OSGEPQ9NPF4 335 aa19.54■□□□□ 0.72
TPM1-226ENST00000560959 DNMT3LQ9UJW3 386 aa19.54■□□□□ 0.72
TPM1-226ENST00000560959 UBE4BO95155 1302 aa19.53■□□□□ 0.72
TPM1-226ENST00000560959 TK2O00142 265 aa19.53■□□□□ 0.72
TPM1-226ENST00000560959 TNFSF14O43557 240 aa19.53■□□□□ 0.72
TPM1-226ENST00000560959 PDCP20941 246 aa19.53■□□□□ 0.72
TPM1-226ENST00000560959 CHKAP35790 457 aa19.53■□□□□ 0.72
TPM1-226ENST00000560959 IL12RB1P42701 662 aa19.53■□□□□ 0.72
TPM1-226ENST00000560959 MFAP3P55082 362 aa19.53■□□□□ 0.72
TPM1-226ENST00000560959 CLDN10P78369 228 aa19.53■□□□□ 0.72
TPM1-226ENST00000560959 CYP4F3Q08477 520 aa19.53■□□□□ 0.72
TPM1-226ENST00000560959 SLC39A14Q15043 492 aa19.53■□□□□ 0.72
TPM1-226ENST00000560959 SMAD1Q15797 465 aaKnown RBP19.53■□□□□ 0.72
TPM1-226ENST00000560959 ZNF699Q32M78 642 aa19.53■□□□□ 0.72
TPM1-226ENST00000560959 TADA2BQ86TJ2 420 aa19.53■□□□□ 0.72
TPM1-226ENST00000560959 ACOT1Q86TX2 421 aa19.53■□□□□ 0.72
TPM1-226ENST00000560959 UNC93AQ86WB7 457 aa19.53■□□□□ 0.72
TPM1-226ENST00000560959 HPS3Q969F9 1004 aa19.53■□□□□ 0.72
TPM1-226ENST00000560959 CUEDC2Q9H467 287 aa19.53■□□□□ 0.72
TPM1-226ENST00000560959 PNPLA8Q9NP80 782 aa19.53■□□□□ 0.72
TPM1-226ENST00000560959 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.53■□□□□ 0.723e-7■■■□□ 15.3
TPM1-226ENST00000560959 OSER1Q9NX31 292 aa19.53■□□□□ 0.72
TPM1-226ENST00000560959 EIF2B4Q9UI10 523 aaKnown RBP19.53■□□□□ 0.72
TPM1-226ENST00000560959 PCDHA5Q9Y5H7 936 aa19.53■□□□□ 0.72
TPM1-226ENST00000560959 PTPRBP23467 1997 aa19.53■□□□□ 0.72
TPM1-226ENST00000560959 CLIC2O15247 247 aa19.52■□□□□ 0.72
TPM1-226ENST00000560959 TIMM44O43615 452 aa19.52■□□□□ 0.72
TPM1-226ENST00000560959 ACADMP11310 421 aa19.52■□□□□ 0.72
TPM1-226ENST00000560959 P4HA1P13674 534 aa19.52■□□□□ 0.72
TPM1-226ENST00000560959 PSEN1P49768 467 aa19.52■□□□□ 0.72
TPM1-226ENST00000560959 CYP2J2P51589 502 aa19.52■□□□□ 0.72
TPM1-226ENST00000560959 AFF3P51826 1226 aaKnown RBP19.52■□□□□ 0.72
TPM1-226ENST00000560959 MAP3K7CLP57077 242 aa19.52■□□□□ 0.72
TPM1-226ENST00000560959 FYB2Q5VWT5 728 aa19.52■□□□□ 0.72
TPM1-226ENST00000560959 ENGASEQ8NFI3 743 aa19.52■□□□□ 0.72
TPM1-226ENST00000560959 SLC2A14Q8TDB8 520 aa19.52■□□□□ 0.72
TPM1-226ENST00000560959 STC2O76061 302 aa19.51■□□□□ 0.71
TPM1-226ENST00000560959 RARGP13631 454 aa19.51■□□□□ 0.71
TPM1-226ENST00000560959 COPAP53621 1224 aa19.51■□□□□ 0.71
TPM1-226ENST00000560959 NCOA4Q13772 614 aa19.51■□□□□ 0.71
TPM1-226ENST00000560959 EIF4HQ15056 248 aaKnown RBP19.51■□□□□ 0.71
TPM1-226ENST00000560959 PTPRNQ16849 979 aa19.51■□□□□ 0.71
TPM1-226ENST00000560959 GEN1Q17RS7 908 aa19.51■□□□□ 0.71
TPM1-226ENST00000560959 C8orf34Q49A92 452 aa19.51■□□□□ 0.71
TPM1-226ENST00000560959 FAM26FQ5R3K3 315 aa19.51■□□□□ 0.71
TPM1-226ENST00000560959 PIWIL1Q96J94 861 aaKnown RBP19.51■□□□□ 0.71
TPM1-226ENST00000560959 UBL7Q96S82 380 aaPredicted RBP19.51■□□□□ 0.71
TPM1-226ENST00000560959 CDK5RAP1Q96SZ6 601 aaKnown RBP19.51■□□□□ 0.71
TPM1-226ENST00000560959 SDCBP2Q9H190 292 aa19.51■□□□□ 0.71
TPM1-226ENST00000560959 ELOVL2Q9NXB9 296 aa19.51■□□□□ 0.71
TPM1-226ENST00000560959 PLK2Q9NYY3 685 aa19.51■□□□□ 0.71
TPM1-226ENST00000560959 ASXL3Q9C0F0 2248 aa19.51■□□□□ 0.71
TPM1-226ENST00000560959 A0A1B0GVT2 93 aa19.5■□□□□ 0.71
TPM1-226ENST00000560959 VPS37CA5D8V6 355 aaPredicted RBP19.5■□□□□ 0.71
TPM1-226ENST00000560959 HHLA1C9JL84 531 aa19.5■□□□□ 0.71
TPM1-226ENST00000560959 PCDHGA12O60330 932 aa19.5■□□□□ 0.71
TPM1-226ENST00000560959 C4BPAP04003 597 aaKnown RBP19.5■□□□□ 0.71
TPM1-226ENST00000560959 RPN1P04843 607 aaKnown RBP19.5■□□□□ 0.71
TPM1-226ENST00000560959 FAM200BP0CF97 657 aa19.5■□□□□ 0.71
TPM1-226ENST00000560959 CCDC130P13994 396 aa19.5■□□□□ 0.71
TPM1-226ENST00000560959 TRIM21P19474 475 aaKnown RBP19.5■□□□□ 0.71
TPM1-226ENST00000560959 GRK6P43250 576 aa19.5■□□□□ 0.71
TPM1-226ENST00000560959 COG7P83436 770 aa19.5■□□□□ 0.71
TPM1-226ENST00000560959 EHHADHQ08426 723 aa19.5■□□□□ 0.71
TPM1-226ENST00000560959 C19orf57Q0VDD7 668 aa19.5■□□□□ 0.71
TPM1-226ENST00000560959 ORC1Q13415 861 aa19.5■□□□□ 0.71
TPM1-226ENST00000560959 BIRC3Q13489 604 aa19.5■□□□□ 0.71
TPM1-226ENST00000560959 TEAD4Q15561 434 aa19.5■□□□□ 0.71
TPM1-226ENST00000560959 E2F4Q16254 413 aa19.5■□□□□ 0.71
TPM1-226ENST00000560959 SGSM1Q2NKQ1 1148 aa19.5■□□□□ 0.71
TPM1-226ENST00000560959 PDILTQ8N807 584 aa19.5■□□□□ 0.71
TPM1-226ENST00000560959 RBBP8NLQ8NC74 664 aaPredicted RBP19.5■□□□□ 0.71
TPM1-226ENST00000560959 PARD3BQ8TEW8 1205 aa19.5■□□□□ 0.71
TPM1-226ENST00000560959 TAF4BQ92750 862 aa19.5■□□□□ 0.71
TPM1-226ENST00000560959 P2RY11Q96G91 374 aa19.5■□□□□ 0.71
TPM1-226ENST00000560959 HNRNPABQ99729 332 aaKnown RBP19.5■□□□□ 0.71
TPM1-226ENST00000560959 SLC2A11Q9BYW1 496 aa19.5■□□□□ 0.71
TPM1-226ENST00000560959 DCLK3Q9C098 648 aa19.5■□□□□ 0.71
TPM1-226ENST00000560959 NMUR1Q9HB89 426 aa19.5■□□□□ 0.71
TPM1-226ENST00000560959 CLIC5Q9NZA1 410 aa19.5■□□□□ 0.71
TPM1-226ENST00000560959 SETXQ7Z333 2677 aaKnown RBP19.49■□□□□ 0.71
TPM1-226ENST00000560959 HELZ2Q9BYK8 2649 aaKnown RBP19.49■□□□□ 0.71
TPM1-226ENST00000560959 CYP26A1O43174 497 aa19.49■□□□□ 0.71
TPM1-226ENST00000560959 KLKB1P03952 638 aa19.49■□□□□ 0.71
TPM1-226ENST00000560959 GRIA4P48058 902 aa19.49■□□□□ 0.71
TPM1-226ENST00000560959 CSNK1EP49674 416 aaKnown RBP19.49■□□□□ 0.71
TPM1-226ENST00000560959 NDST1P52848 882 aa19.49■□□□□ 0.71
TPM1-226ENST00000560959 CEBPZQ03701 1054 aaKnown RBP19.49■□□□□ 0.71
TPM1-226ENST00000560959 ZNF234Q14588 700 aa19.49■□□□□ 0.71
TPM1-226ENST00000560959 KIF19Q2TAC6 998 aa19.49■□□□□ 0.71
TPM1-226ENST00000560959 C10orf120Q5SQS8 335 aa19.49■□□□□ 0.71
TPM1-226ENST00000560959 CLEC20AQ6ZU45 233 aa19.49■□□□□ 0.71
TPM1-226ENST00000560959 ANKS1BQ7Z6G8 1248 aa19.49■□□□□ 0.71
TPM1-226ENST00000560959 TMPRSS12Q86WS5 348 aa19.49■□□□□ 0.71
TPM1-226ENST00000560959 ADAM32Q8TC27 787 aa19.49■□□□□ 0.71
TPM1-226ENST00000560959 TMEM174Q8WUU8 243 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms