RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 WDR35Q9P2L0 1181 aa5.76□□□□□ -1.49
ZEB1-220ENST00000560909 HESX1Q9UBX0 185 aa5.76□□□□□ -1.49
ZEB1-220ENST00000560909 PCDHA13Q9Y5I0 950 aa5.76□□□□□ -1.49
ZEB1-220ENST00000560909 TSC2P49815 1807 aa5.76□□□□□ -1.49
ZEB1-220ENST00000560909 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.75□□□□□ -1.49
ZEB1-220ENST00000560909 F8VP50 259 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 M0QYV0 167 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 SOX1O00570 391 aaPredicted RBP5.75□□□□□ -1.49
ZEB1-220ENST00000560909 PAPSS1O43252 624 aaPredicted RBP5.75□□□□□ -1.49
ZEB1-220ENST00000560909 NRDCO43847 1150 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 FBXO21O94952 628 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 ERBB2P04626 1255 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 CALB1P05937 261 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 PTMAP06454 111 aaKnown RBP5.75□□□□□ -1.49
ZEB1-220ENST00000560909 GLI1P08151 1106 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 ATF6P18850 670 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 ADORA2BP29275 332 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 MAGEA1P43355 309 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 NSFP46459 744 aaKnown RBP5.75□□□□□ -1.49
ZEB1-220ENST00000560909 VAV2P52735 878 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 EPHA5P54756 1037 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 SLC8A3P57103 927 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 SNX16P57768 344 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 RPL10AP62906 217 aaKnown RBP5.75□□□□□ -1.49
ZEB1-220ENST00000560909 GPC5P78333 572 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 DUSP4Q13115 394 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 MAMLD1Q13495 774 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 EIF4EBP2Q13542 120 aaPredicted RBP5.75□□□□□ -1.49
ZEB1-220ENST00000560909 PTPROQ16827 1216 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 CCDC122Q5T0U0 273 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 SNX30Q5VWJ9 437 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 OLFML1Q6UWY5 402 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 SLC26A9Q7LBE3 791 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 BNIPLQ7Z465 357 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 ERICH1Q86X53 443 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 XYLT1Q86Y38 959 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 SPATA2LQ8IUW3 424 aaPredicted RBP5.75□□□□□ -1.49
ZEB1-220ENST00000560909 REXO1L1PQ8IX06 675 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 PHTF2Q8N3S3 785 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 TTC9BQ8N6N2 239 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 C3orf20Q8ND61 904 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 FNIP1Q8TF40 1166 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 CPA5Q8WXQ8 436 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 ARNTL2Q8WYA1 636 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 IRGQQ8WZA9 623 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 NT5C3BQ969T7 300 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 C18orf8Q96DM3 657 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 TRMT2BQ96GJ1 504 aaKnown RBP5.75□□□□□ -1.49
ZEB1-220ENST00000560909 PPP1R13BQ96KQ4 1090 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 CALR3Q96L12 384 aaKnown RBP5.75□□□□□ -1.49
ZEB1-220ENST00000560909 ZNF830Q96NB3 372 aaPredicted RBP5.75□□□□□ -1.49
ZEB1-220ENST00000560909 NOX5Q96PH1 765 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 KCNK16Q96T55 309 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 LRRC3Q9BY71 257 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 LACRTQ9GZZ8 138 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 CNGB3Q9NQW8 809 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 KRT82Q9NSB4 513 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 SPTLC3Q9NUV7 552 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 ADAM22Q9P0K1 906 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 UVRAGQ9P2Y5 699 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 SALL4Q9UJQ4 1053 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 TMEM59LQ9UK28 342 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 PYCARDQ9ULZ3 195 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 DOLKQ9UPQ8 538 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 SCML2Q9UQR0 700 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 ZKSCAN5Q9Y2L8 839 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 ASB3Q9Y575 518 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 CEP83Q9Y592 693 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 PCDHGC5Q9Y5F6 944 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.75□□□□□ -1.49
ZEB1-220ENST00000560909 BRWD1Q9NSI6 2320 aa5.75□□□□□ -1.49
ZEB1-220ENST00000560909 COL4A4P53420 1690 aaPredicted RBP5.75□□□□□ -1.49
ZEB1-220ENST00000560909 KIAA1671Q9BY89 1806 aa5.74□□□□□ -1.49
ZEB1-220ENST00000560909 PRRC2BQ5JSZ5 2229 aaKnown RBP5.74□□□□□ -1.49
ZEB1-220ENST00000560909 A0A1W2PNR3 127 aa5.74□□□□□ -1.49
ZEB1-220ENST00000560909 TMEM191CA6NGB0 347 aa5.74□□□□□ -1.49
ZEB1-220ENST00000560909 SIGLEC16A6NMB1 481 aa5.74□□□□□ -1.49
ZEB1-220ENST00000560909 E5RJQ4 531 aa5.74□□□□□ -1.49
ZEB1-220ENST00000560909 SART1O43290 800 aaKnown RBP5.74□□□□□ -1.49
ZEB1-220ENST00000560909 ENDOD1O94919 500 aa5.74□□□□□ -1.49
ZEB1-220ENST00000560909 CLSTN1O94985 981 aa5.74□□□□□ -1.49
ZEB1-220ENST00000560909 RTN3O95197 1032 aaPredicted RBP5.74□□□□□ -1.49
ZEB1-220ENST00000560909 GLUD1P00367 558 aa5.74□□□□□ -1.49
ZEB1-220ENST00000560909 FYNP06241 537 aa5.74□□□□□ -1.49
ZEB1-220ENST00000560909 HNRNPA1P09651 372 aaKnown RBP eCLIP5.74□□□□□ -1.49
ZEB1-220ENST00000560909 CCDC175P0C221 793 aa5.74□□□□□ -1.49
ZEB1-220ENST00000560909 CPB1P15086 417 aa5.74□□□□□ -1.49
ZEB1-220ENST00000560909 RRM1P23921 792 aa5.74□□□□□ -1.49
ZEB1-220ENST00000560909 KLRC2P26717 231 aa5.74□□□□□ -1.49
ZEB1-220ENST00000560909 DEKP35659 375 aaKnown RBP5.74□□□□□ -1.49
ZEB1-220ENST00000560909 MAP3K7CLP57077 242 aa5.74□□□□□ -1.49
ZEB1-220ENST00000560909 DAOAP59103 153 aa5.74□□□□□ -1.49
ZEB1-220ENST00000560909 MRPS5P82675 430 aaKnown RBP5.74□□□□□ -1.49
ZEB1-220ENST00000560909 SLC6A3Q01959 620 aa5.74□□□□□ -1.49
ZEB1-220ENST00000560909 VAC14Q08AM6 782 aa5.74□□□□□ -1.49
ZEB1-220ENST00000560909 USP4Q13107 963 aa5.74□□□□□ -1.49
ZEB1-220ENST00000560909 SPA17Q15506 151 aa5.74□□□□□ -1.49
ZEB1-220ENST00000560909 DDR2Q16832 855 aa5.74□□□□□ -1.49
ZEB1-220ENST00000560909 MAP7D1Q3KQU3 841 aa5.74□□□□□ -1.49
ZEB1-220ENST00000560909 PLPP4Q5VZY2 271 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms