RNA–Protein interactions for RNA: ENST00000560532.1

SLTM-223, Transcript of SAFB like transcription modulator, human

TSL 4

Gene SLTM, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-223	ENST00000560532	TRIM5	Q9C035	493 aa		4.22	□□□□□ -1.73
SLTM-223	ENST00000560532	GAR1	Q9NY12	217 aa	Known RBP	4.22	□□□□□ -1.73
SLTM-223	ENST00000560532	TCEAL9	Q9UHQ7	104 aa		4.22	□□□□□ -1.73
SLTM-223	ENST00000560532	ICAM5	Q9UMF0	924 aa		4.22	□□□□□ -1.73
SLTM-223	ENST00000560532	L1RE1	Q9UN81	338 aa		4.22	□□□□□ -1.73
SLTM-223	ENST00000560532	FYB1	O15117	783 aa		4.21	□□□□□ -1.74
SLTM-223	ENST00000560532	PHGDH	O43175	533 aa	Known RBP	4.21	□□□□□ -1.74
SLTM-223	ENST00000560532	HGF	P14210	728 aa		4.21	□□□□□ -1.74
SLTM-223	ENST00000560532	RHCE	P18577	417 aa		4.21	□□□□□ -1.74
SLTM-223	ENST00000560532	ALDH7A1	P49419	539 aa	Known RBP	4.21	□□□□□ -1.74
SLTM-223	ENST00000560532	KEAP1	Q14145	624 aa		4.21	□□□□□ -1.74
SLTM-223	ENST00000560532	PFKFB3	Q16875	520 aa	Predicted RBP	4.21	□□□□□ -1.74
SLTM-223	ENST00000560532	PDXDC1	Q6P996	788 aa		4.21	□□□□□ -1.74
SLTM-223	ENST00000560532	MYO1H	Q8N1T3	1032 aa		4.21	□□□□□ -1.74
SLTM-223	ENST00000560532	IQCF1	Q8N6M8	205 aa		4.21	□□□□□ -1.74
SLTM-223	ENST00000560532	C12orf76	Q8N812	135 aa	Predicted RBP	4.21	□□□□□ -1.74
SLTM-223	ENST00000560532	IL31RA	Q8NI17	732 aa		4.21	□□□□□ -1.74
SLTM-223	ENST00000560532	TSR2	Q969E8	191 aa	Known RBP	4.21	□□□□□ -1.74
SLTM-223	ENST00000560532	EDC3	Q96F86	508 aa	Known RBP	4.21	□□□□□ -1.74
SLTM-223	ENST00000560532	SMURF2	Q9HAU4	748 aa		4.21	□□□□□ -1.74
SLTM-223	ENST00000560532	USP29	Q9HBJ7	922 aa		4.21	□□□□□ -1.74
SLTM-223	ENST00000560532	XPNPEP3	Q9NQH7	507 aa		4.21	□□□□□ -1.74
SLTM-223	ENST00000560532	KLHL42	Q9P2K6	505 aa		4.21	□□□□□ -1.74
SLTM-223	ENST00000560532	ASAP1	Q9ULH1	1129 aa		4.21	□□□□□ -1.74
SLTM-223	ENST00000560532	SIRT4	Q9Y6E7	314 aa	Predicted RBP	4.21	□□□□□ -1.74
SLTM-223	ENST00000560532	CAPN8	A6NHC0	703 aa		4.2	□□□□□ -1.74
SLTM-223	ENST00000560532	ZNF814	B7Z6K7	855 aa		4.2	□□□□□ -1.74
SLTM-223	ENST00000560532	FRS3	O43559	492 aa		4.2	□□□□□ -1.74
SLTM-223	ENST00000560532	PAPSS2	O95340	614 aa	Predicted RBP	4.2	□□□□□ -1.74
SLTM-223	ENST00000560532	HRG	P04196	525 aa		4.2	□□□□□ -1.74
SLTM-223	ENST00000560532	EN2	P19622	333 aa	Predicted RBP	4.2	□□□□□ -1.74
SLTM-223	ENST00000560532	MCM5	P33992	734 aa		4.2	□□□□□ -1.74
SLTM-223	ENST00000560532	ENTPD1	P49961	510 aa		4.2	□□□□□ -1.74
SLTM-223	ENST00000560532	GAS1	P54826	345 aa		4.2	□□□□□ -1.74
SLTM-223	ENST00000560532	DEUP1	Q05D60	604 aa		4.2	□□□□□ -1.74
SLTM-223	ENST00000560532	LTB	Q06643	244 aa		4.2	□□□□□ -1.74
SLTM-223	ENST00000560532	GBX1	Q14549	363 aa		4.2	□□□□□ -1.74
SLTM-223	ENST00000560532	FAM110C	Q1W6H9	321 aa		4.2	□□□□□ -1.74
SLTM-223	ENST00000560532	CYB5RL	Q6IPT4	315 aa		4.2	□□□□□ -1.74
SLTM-223	ENST00000560532	CHST15	Q7LFX5	561 aa	Predicted RBP	4.2	□□□□□ -1.74
SLTM-223	ENST00000560532	C11orf44	Q8N8P7	122 aa		4.2	□□□□□ -1.74
SLTM-223	ENST00000560532	MAML1	Q92585	1016 aa		4.2	□□□□□ -1.74
SLTM-223	ENST00000560532	PPP1R9B	Q96SB3	815 aa		4.2	□□□□□ -1.74
SLTM-223	ENST00000560532	MSRB1	Q9NZV6	116 aa		4.2	□□□□□ -1.74
SLTM-223	ENST00000560532	DNMT3B	Q9UBC3	853 aa	Known RBP	4.2	□□□□□ -1.74
SLTM-223	ENST00000560532	DDX20	Q9UHI6	824 aa	Known RBP	4.2	□□□□□ -1.74
SLTM-223	ENST00000560532	PCDHA7	Q9UN72	937 aa		4.2	□□□□□ -1.74
SLTM-223	ENST00000560532		A0A1W2PPC1	479 aa		4.19	□□□□□ -1.74
SLTM-223	ENST00000560532		H7C4K7	107 aa		4.19	□□□□□ -1.74
SLTM-223	ENST00000560532	TBX3	O15119	743 aa		4.19	□□□□□ -1.74
SLTM-223	ENST00000560532	CD3EAP	O15446	510 aa	Known RBP	4.19	□□□□□ -1.74
SLTM-223	ENST00000560532	ZC3H11A	O75152	810 aa	Known RBP eCLIP	4.19	□□□□□ -1.74
SLTM-223	ENST00000560532	CD63	P08962	238 aa		4.19	□□□□□ -1.74
SLTM-223	ENST00000560532	GATM	P50440	423 aa		4.19	□□□□□ -1.74
SLTM-223	ENST00000560532	TIAL1	Q01085	375 aa	Known RBP eCLIP	4.19	□□□□□ -1.74
SLTM-223	ENST00000560532	PTGR1	Q14914	329 aa		4.19	□□□□□ -1.74
SLTM-223	ENST00000560532	KPNB1	Q14974	876 aa	Known RBP	4.19	□□□□□ -1.74
SLTM-223	ENST00000560532	CNN3	Q15417	329 aa	Known RBP	4.19	□□□□□ -1.74
SLTM-223	ENST00000560532	INSC	Q1MX18	579 aa		4.19	□□□□□ -1.74
SLTM-223	ENST00000560532	EARS2	Q5JPH6	523 aa	Known RBP	4.19	□□□□□ -1.74
SLTM-223	ENST00000560532	APOA5	Q6Q788	366 aa		4.19	□□□□□ -1.74
SLTM-223	ENST00000560532	NGDN	Q8NEJ9	315 aa	Known RBP	4.19	□□□□□ -1.74
SLTM-223	ENST00000560532	OR56A3	Q8NH54	315 aa		4.19	□□□□□ -1.74
SLTM-223	ENST00000560532	TTC8	Q8TAM2	541 aa		4.19	□□□□□ -1.74
SLTM-223	ENST00000560532	OIT3	Q8WWZ8	545 aa		4.19	□□□□□ -1.74
SLTM-223	ENST00000560532	KAZALD1	Q96I82	304 aa		4.19	□□□□□ -1.74
SLTM-223	ENST00000560532	TUBB6	Q9BUF5	446 aa		4.19	□□□□□ -1.74
SLTM-223	ENST00000560532	RBM38	Q9H0Z9	239 aa	Known RBP	4.19	□□□□□ -1.74
SLTM-223	ENST00000560532	A1CF	Q9NQ94	594 aa	Known RBP	4.19	□□□□□ -1.74
SLTM-223	ENST00000560532	USP19	O94966	1318 aa		4.19	□□□□□ -1.74
SLTM-223	ENST00000560532	TRIP12	Q14669	1992 aa	Predicted RBP	4.18	□□□□□ -1.74
SLTM-223	ENST00000560532	VSTM5	A8MXK1	200 aa		4.18	□□□□□ -1.74
SLTM-223	ENST00000560532	AGPS	O00116	658 aa		4.18	□□□□□ -1.74
SLTM-223	ENST00000560532	ZBED1	O96006	694 aa		4.18	□□□□□ -1.74
SLTM-223	ENST00000560532	PLAU	P00749	431 aa		4.18	□□□□□ -1.74
SLTM-223	ENST00000560532	CGA	P01215	116 aa		4.18	□□□□□ -1.74
SLTM-223	ENST00000560532	PGD	P52209	483 aa		4.18	□□□□□ -1.74
SLTM-223	ENST00000560532	GALE	Q14376	348 aa		4.18	□□□□□ -1.74
SLTM-223	ENST00000560532	GRM3	Q14832	879 aa		4.18	□□□□□ -1.74
SLTM-223	ENST00000560532	GFOD2	Q3B7J2	385 aa		4.18	□□□□□ -1.74
SLTM-223	ENST00000560532	ARHGAP29	Q52LW3	1261 aa		4.18	□□□□□ -1.74
SLTM-223	ENST00000560532	NUGGC	Q68CJ6	796 aa		4.18	□□□□□ -1.74
SLTM-223	ENST00000560532	NADSYN1	Q6IA69	706 aa		4.18	□□□□□ -1.74
SLTM-223	ENST00000560532	FAM57B	Q71RH2	274 aa		4.18	□□□□□ -1.74
SLTM-223	ENST00000560532	METTL25	Q8N6Q8	603 aa		4.18	□□□□□ -1.74
SLTM-223	ENST00000560532	SPSB4	Q96A44	273 aa		4.18	□□□□□ -1.74
SLTM-223	ENST00000560532	HIC2	Q96JB3	615 aa		4.18	□□□□□ -1.74
SLTM-223	ENST00000560532	TM2D2	Q9BX73	214 aa		4.18	□□□□□ -1.74
SLTM-223	ENST00000560532	ZNF518B	Q9C0D4	1074 aa		4.18	□□□□□ -1.74
SLTM-223	ENST00000560532	FAM204A	Q9H8W3	233 aa		4.18	□□□□□ -1.74
SLTM-223	ENST00000560532	METTL14	Q9HCE5	456 aa	Known RBP	4.18	□□□□□ -1.74
SLTM-223	ENST00000560532	STK32B	Q9NY57	414 aa		4.18	□□□□□ -1.74
SLTM-223	ENST00000560532	NKX1-2	Q9UD57	310 aa	Predicted RBP	4.18	□□□□□ -1.74
SLTM-223	ENST00000560532	PCDHA12	Q9UN75	941 aa		4.18	□□□□□ -1.74
SLTM-223	ENST00000560532	LOC102723971	A0A1B0GUV8	181 aa		4.17	□□□□□ -1.74
SLTM-223	ENST00000560532	GOLGA6C	A6NDK9	693 aa		4.17	□□□□□ -1.74
SLTM-223	ENST00000560532	GOLGA6B	A6NDN3	693 aa		4.17	□□□□□ -1.74
SLTM-223	ENST00000560532	TPP1	O14773	563 aa		4.17	□□□□□ -1.74
SLTM-223	ENST00000560532	RASSF9	O75901	435 aa		4.17	□□□□□ -1.74
SLTM-223	ENST00000560532	PARP1	P09874	1014 aa	Known RBP	4.17	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 36 ms