RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 ERVH48-1M5A8F1 160 aa9.45□□□□□ -0.9
RABGGTA-217ENST00000560521 TLR5O60602 858 aa9.45□□□□□ -0.9
RABGGTA-217ENST00000560521 TNNC2P02585 160 aa9.45□□□□□ -0.9
RABGGTA-217ENST00000560521 FAM163BP0C2L3 166 aa9.45□□□□□ -0.9
RABGGTA-217ENST00000560521 ACADMP11310 421 aa9.45□□□□□ -0.9
RABGGTA-217ENST00000560521 HNF1BP35680 557 aa9.45□□□□□ -0.9
RABGGTA-217ENST00000560521 CTSKP43235 329 aa9.45□□□□□ -0.9
RABGGTA-217ENST00000560521 CASP5P51878 434 aa9.45□□□□□ -0.9
RABGGTA-217ENST00000560521 SLC5A3P53794 718 aa9.45□□□□□ -0.9
RABGGTA-217ENST00000560521 MFAP3P55082 362 aa9.45□□□□□ -0.9
RABGGTA-217ENST00000560521 TLE3Q04726 772 aa9.45□□□□□ -0.9
RABGGTA-217ENST00000560521 TEAD4Q15561 434 aa9.45□□□□□ -0.9
RABGGTA-217ENST00000560521 GEN1Q17RS7 908 aa9.45□□□□□ -0.9
RABGGTA-217ENST00000560521 PRAMEF14Q5SWL7 426 aa9.45□□□□□ -0.9
RABGGTA-217ENST00000560521 USP49Q70CQ1 688 aa9.45□□□□□ -0.9
RABGGTA-217ENST00000560521 CACUL1Q86Y37 369 aa9.45□□□□□ -0.9
RABGGTA-217ENST00000560521 GATAD2AQ86YP4 633 aa9.45□□□□□ -0.9
RABGGTA-217ENST00000560521 GPD1LQ8N335 351 aa9.45□□□□□ -0.9
RABGGTA-217ENST00000560521 B3GALNT2Q8NCR0 500 aa9.45□□□□□ -0.9
RABGGTA-217ENST00000560521 ENGASEQ8NFI3 743 aa9.45□□□□□ -0.9
RABGGTA-217ENST00000560521 BAP1Q92560 729 aa9.45□□□□□ -0.9
RABGGTA-217ENST00000560521 BIRC7Q96CA5 298 aa9.45□□□□□ -0.9
RABGGTA-217ENST00000560521 ORAI3Q9BRQ5 295 aa9.45□□□□□ -0.9
RABGGTA-217ENST00000560521 FGFBP2Q9BYJ0 223 aa9.45□□□□□ -0.9
RABGGTA-217ENST00000560521 NACA2Q9H009 215 aa9.45□□□□□ -0.9
RABGGTA-217ENST00000560521 PCED1AQ9H1Q7 454 aa9.45□□□□□ -0.9
RABGGTA-217ENST00000560521 COMMD8Q9NX08 183 aa9.45□□□□□ -0.9
RABGGTA-217ENST00000560521 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.45□□□□□ -0.9
RABGGTA-217ENST00000560521 R3HCC1Q9Y3T6 440 aaKnown RBP9.45□□□□□ -0.9
RABGGTA-217ENST00000560521 A0A1B0GTQ1 180 aa9.44□□□□□ -0.9
RABGGTA-217ENST00000560521 A8MXQ7 604 aa9.44□□□□□ -0.9
RABGGTA-217ENST00000560521 ENC1O14682 589 aa9.44□□□□□ -0.9
RABGGTA-217ENST00000560521 NPC1O15118 1278 aa9.44□□□□□ -0.9
RABGGTA-217ENST00000560521 BRINP1O60477 761 aa9.44□□□□□ -0.9
RABGGTA-217ENST00000560521 SYNCRIPO60506 623 aaKnown RBP9.44□□□□□ -0.9
RABGGTA-217ENST00000560521 TSPAN3O60637 253 aa9.44□□□□□ -0.9
RABGGTA-217ENST00000560521 RFPL3O75679 317 aa9.44□□□□□ -0.9
RABGGTA-217ENST00000560521 BEST1O76090 585 aa9.44□□□□□ -0.9
RABGGTA-217ENST00000560521 GCNT3O95395 438 aa9.44□□□□□ -0.9
RABGGTA-217ENST00000560521 C1SP09871 688 aa9.44□□□□□ -0.9
RABGGTA-217ENST00000560521 PRKCHP24723 683 aa9.44□□□□□ -0.9
RABGGTA-217ENST00000560521 CDH8P55286 799 aa9.44□□□□□ -0.9
RABGGTA-217ENST00000560521 KCNC4Q03721 635 aa9.44□□□□□ -0.9
RABGGTA-217ENST00000560521 CCDC173Q0VFZ6 552 aa9.44□□□□□ -0.9
RABGGTA-217ENST00000560521 ORC1Q13415 861 aa9.44□□□□□ -0.9
RABGGTA-217ENST00000560521 ZNF234Q14588 700 aa9.44□□□□□ -0.9
RABGGTA-217ENST00000560521 DUOXA2Q1HG44 320 aa9.44□□□□□ -0.9
RABGGTA-217ENST00000560521 WDR72Q3MJ13 1102 aa9.44□□□□□ -0.9
RABGGTA-217ENST00000560521 TAF1BQ53T94 588 aaPredicted RBP9.44□□□□□ -0.9
RABGGTA-217ENST00000560521 HES3Q5TGS1 186 aa9.44□□□□□ -0.9
RABGGTA-217ENST00000560521 FYB2Q5VWT5 728 aa9.44□□□□□ -0.9
RABGGTA-217ENST00000560521 MCTP1Q6DN14 999 aa9.44□□□□□ -0.9
RABGGTA-217ENST00000560521 FBXL19Q6PCT2 694 aa9.44□□□□□ -0.9
RABGGTA-217ENST00000560521 Q6ZNB5 142 aa9.44□□□□□ -0.9
RABGGTA-217ENST00000560521 TRAPPC11Q7Z392 1133 aa9.44□□□□□ -0.9
RABGGTA-217ENST00000560521 FMNL3Q8IVF7 1028 aa9.44□□□□□ -0.9
RABGGTA-217ENST00000560521 SPACA3Q8IXA5 215 aa9.44□□□□□ -0.9
RABGGTA-217ENST00000560521 SYCP3Q8IZU3 236 aa9.44□□□□□ -0.9
RABGGTA-217ENST00000560521 FAM181AQ8N9Y4 354 aa9.44□□□□□ -0.9
RABGGTA-217ENST00000560521 RBBP8NLQ8NC74 664 aaPredicted RBP9.44□□□□□ -0.9
RABGGTA-217ENST00000560521 ZMIZ2Q8NF64 920 aa9.44□□□□□ -0.9
RABGGTA-217ENST00000560521 DNAJC19Q96DA6 116 aa9.44□□□□□ -0.9
RABGGTA-217ENST00000560521 WBP1Q96G27 269 aa9.44□□□□□ -0.9
RABGGTA-217ENST00000560521 TMEM176AQ96HP8 235 aa9.44□□□□□ -0.9
RABGGTA-217ENST00000560521 PIWIL1Q96J94 861 aaKnown RBP9.44□□□□□ -0.9
RABGGTA-217ENST00000560521 CNDP2Q96KP4 475 aaKnown RBP9.44□□□□□ -0.9
RABGGTA-217ENST00000560521 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.44□□□□□ -0.9
RABGGTA-217ENST00000560521 OSER1Q9NX31 292 aa9.44□□□□□ -0.9
RABGGTA-217ENST00000560521 CLEC4EQ9ULY5 219 aa9.44□□□□□ -0.9
RABGGTA-217ENST00000560521 COL27A1Q8IZC6 1860 aaPredicted RBP9.44□□□□□ -0.9
RABGGTA-217ENST00000560521 B8ZZF3 427 aa9.43□□□□□ -0.9
RABGGTA-217ENST00000560521 MDM4O15151 490 aa9.43□□□□□ -0.9
RABGGTA-217ENST00000560521 PRPF6O94906 941 aaKnown RBP9.43□□□□□ -0.9
RABGGTA-217ENST00000560521 LDOC1O95751 146 aaPredicted RBP9.43□□□□□ -0.9
RABGGTA-217ENST00000560521 PENKP01210 267 aaPredicted RBP9.43□□□□□ -0.9
RABGGTA-217ENST00000560521 EPHX1P07099 455 aa9.43□□□□□ -0.9
RABGGTA-217ENST00000560521 C7P10643 843 aa9.43□□□□□ -0.9
RABGGTA-217ENST00000560521 CDK4P11802 303 aa9.43□□□□□ -0.9
RABGGTA-217ENST00000560521 ATP5C1P36542 298 aaKnown RBP9.43□□□□□ -0.9
RABGGTA-217ENST00000560521 ACADVLP49748 655 aa9.43□□□□□ -0.9
RABGGTA-217ENST00000560521 KCNH2Q12809 1159 aa9.43□□□□□ -0.9
RABGGTA-217ENST00000560521 LY6DQ14210 128 aa9.43□□□□□ -0.9
RABGGTA-217ENST00000560521 SHBQ15464 509 aa9.43□□□□□ -0.9
RABGGTA-217ENST00000560521 SURF1Q15526 300 aa9.43□□□□□ -0.9
RABGGTA-217ENST00000560521 TMEM215Q68D42 235 aa9.43□□□□□ -0.9
RABGGTA-217ENST00000560521 FAM35AQ86V20 835 aa9.43□□□□□ -0.9
RABGGTA-217ENST00000560521 ERICH1Q86X53 443 aa9.43□□□□□ -0.9
RABGGTA-217ENST00000560521 CBWD2Q8IUF1 395 aa9.43□□□□□ -0.9
RABGGTA-217ENST00000560521 UCMAQ8WVF2 138 aa9.43□□□□□ -0.9
RABGGTA-217ENST00000560521 SORCS1Q8WY21 1168 aa9.43□□□□□ -0.9
RABGGTA-217ENST00000560521 SMOQ99835 787 aa9.43□□□□□ -0.9
RABGGTA-217ENST00000560521 CYLDQ9NQC7 956 aa9.43□□□□□ -0.9
RABGGTA-217ENST00000560521 ELOVL2Q9NXB9 296 aa9.43□□□□□ -0.9
RABGGTA-217ENST00000560521 SEL1LQ9UBV2 794 aa9.43□□□□□ -0.9
RABGGTA-217ENST00000560521 LSM7Q9UK45 103 aaKnown RBP9.43□□□□□ -0.9
RABGGTA-217ENST00000560521 NUDT5Q9UKK9 219 aa9.43□□□□□ -0.9
RABGGTA-217ENST00000560521 PCDHB13Q9Y5F0 798 aa9.43□□□□□ -0.9
RABGGTA-217ENST00000560521 SPTA1P02549 2419 aa9.43□□□□□ -0.9
RABGGTA-217ENST00000560521 BSNQ9UPA5 3926 aa9.42□□□□□ -0.9
RABGGTA-217ENST00000560521 ZNF233A6NK53 670 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms